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Choi Y, Lee H. Interpretation of lung disease classification with light attention connected module. Biomed Signal Process Control 2023; 84:104695. [PMID: 36879856 PMCID: PMC9978539 DOI: 10.1016/j.bspc.2023.104695] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Revised: 12/21/2022] [Accepted: 02/11/2023] [Indexed: 03/06/2023]
Abstract
Lung diseases lead to complications from obstructive diseases, and the COVID-19 pandemic has increased lung disease-related deaths. Medical practitioners use stethoscopes to diagnose lung disease. However, an artificial intelligence model capable of objective judgment is required since the experience and diagnosis of respiratory sounds differ. Therefore, in this study, we propose a lung disease classification model that uses an attention module and deep learning. Respiratory sounds were extracted using log-Mel spectrogram MFCC. Normal and five types of adventitious sounds were effectively classified by improving VGGish and adding a light attention connected module to which the efficient channel attention module (ECA-Net) was applied. The performance of the model was evaluated for accuracy, precision, sensitivity, specificity, f1-score, and balanced accuracy, which were 92.56%, 92.81%, 92.22%, 98.50%, 92.29%, and 95.4%, respectively. We confirmed high performance according to the attention effect. The classification causes of lung diseases were analyzed using gradient-weighted class activation mapping (Grad-CAM), and the performances of their models were compared using open lung sounds measured using a Littmann 3200 stethoscope. The experts' opinions were also included. Our results will contribute to the early diagnosis and interpretation of diseases in patients with lung disease by utilizing algorithms in smart medical stethoscopes.
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Affiliation(s)
- Youngjin Choi
- School of Industrial Management Engineering, Korea University, 145 Anam-ro, Seongbuk-gu, Seoul 02841, Republic of Korea
| | - Hongchul Lee
- School of Industrial Management Engineering, Korea University, 145 Anam-ro, Seongbuk-gu, Seoul 02841, Republic of Korea
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2
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Vijayanandh T, Shenbagavalli A. A Hybrid Deep Neural Approach for Segmenting the COVID Affection Area from the Lungs X-Ray Images. New Gener Comput 2023; 41:1-20. [PMID: 37362548 PMCID: PMC10184644 DOI: 10.1007/s00354-023-00222-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Accepted: 05/04/2023] [Indexed: 06/28/2023]
Abstract
Nowadays, COVID severity prediction has attracted widely in medical research because of the disease severity. Hence, the image processing application is also utilized to analyze COVID severity identification using lungs X-ray images. Thus, several intelligent schemes were employed to detect the COVID-affected part of the lungs X-ray images. However, the traditional neural approaches reported less severity classification accuracy due to the image complexity score. So, the present study has presented a novel chimp-based Adaboost Severity Analysis (CbASA) implemented in the MATLAB environment. Hence, the lung's X-ray images are utilized to test the working performance of the designed model. All public imaging data sources contain more noisy features, so the noise features are removed in the initial hidden layer of the novel CbASA then the noise-free data is imported into the classification phase. Feature extraction, segmentation, and severity specification have been performed in the classification layer. Finally, the performance of the classification score has been measured and compared with other models. Subsequently, the presented novel CbASA has earned the finest classification outcome.
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Affiliation(s)
- T. Vijayanandh
- Department of Computer Science and Engineering, Vel Tech Rangarajan Dr.Sagunthala R&D Institute of Science and Technology, Chennai, Tamil Nadu 600062 India
| | - A. Shenbagavalli
- Department of Electronics and Communication Engineering, National Engineering College, Kovilpatti, Tamil Nadu 628503 India
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3
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Al Qundus J, Gupta S, Abusaimeh H, Peikert S, Paschke A. Prescriptive Analytics-Based SIRM Model for Predicting Covid-19 Outbreak. Glob J Flex Syst Manag 2023. [PMID: 37101929 PMCID: PMC10020765 DOI: 10.1007/s40171-023-00337-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2022] [Accepted: 02/18/2023] [Indexed: 03/18/2023]
Abstract
Predicting the outbreak of a pandemic is an important measure in order to help saving people lives threatened by Covid-19. Having information about the possible spread of the pandemic, authorities and people can make better decisions. For example, such analyses help developing better strategies for distributing vaccines and medicines. This paper has modified the original Susceptible-Infectious-Recovered (SIR) model to Susceptible-Immune-Infected-Recovered (SIRM) which includes the Immunity ratio as a parameter to enhance the prediction of the pandemic. SIR is a widely used model to predict the spread of a pandemic. Many types of pandemics imply many variants of the SIR models which make it very difficult to find out the best model that matches the running pandemic. The simulation of this paper used the published data about the spread of the pandemic in order to examine our new SIRM. The results showed clearly that our new SIRM covering the aspects of vaccine and medicine is an appropriate model to predict the behavior of the pandemic.
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Gülmez B. A novel deep neural network model based Xception and genetic algorithm for detection of COVID-19 from X-ray images. Ann Oper Res 2022; 328:1-25. [PMID: 36591406 PMCID: PMC9790088 DOI: 10.1007/s10479-022-05151-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 12/14/2022] [Indexed: 06/17/2023]
Abstract
The coronavirus first appeared in China in 2019, and the World Health Organization (WHO) named it COVID-19. Then WHO announced this illness as a worldwide pandemic in March 2020. The number of cases, infections, and fatalities varied considerably worldwide. Because the main characteristic of COVID-19 is its rapid spread, doctors and specialists generally use PCR tests to detect the COVID-19 virus. As an alternative to PCR, X-ray images can help diagnose illness using artificial intelligence (AI). In medicine, AI is commonly employed. Convolutional neural networks (CNN) and deep learning models make it simple to extract information from images. Several options exist when creating a deep CNN. The possibilities include network depth, layer count, layer type, and parameters. In this paper, a novel Xception-based neural network is discovered using the genetic algorithm (GA). GA finds better alternative networks and parameters during iterations. The best network discovered with GA is tested on a COVID-19 X-ray image dataset. The results are compared with other networks and the results of papers in the literature. The novel network of this paper gives more successful results. The accuracy results are 0.996, 0.989, and 0.924 for two-class, three-class, and four-class datasets, respectively.
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Affiliation(s)
- Burak Gülmez
- Department of Industrial Engineering, Erciyes University, Kayseri, Türkiye
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5
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Sariyer G, Ataman MG, Mangla SK, Kazancoglu Y, Dora M. Big data analytics and the effects of government restrictions and prohibitions in the COVID-19 pandemic on emergency department sustainable operations. Ann Oper Res 2022; 328:1-31. [PMID: 36124052 PMCID: PMC9476441 DOI: 10.1007/s10479-022-04955-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 08/29/2022] [Indexed: 05/03/2023]
Abstract
Grounded in dynamic capabilities, this study mainly aims to model emergency departments' (EDs) sustainable operations in the current situation caused by the COVID-19 pandemic by using emerging big data analytics (BDA) technologies. Since government may impose some restrictions and prohibitions in coping with emergencies to protect the functioning of EDs, it also aims to investigate how such policies affect ED operations. The proposed model is designed by collecting big data from multiple sources and implementing BDA to transform it into action for providing efficient responses to emergencies. The model is validated in modeling the daily number of patients, the average daily length of stay (LOS), and daily numbers of laboratory tests and radiologic imaging tests ordered. It is applied in a case study representing a large-scale ED. The data set covers a seven-month period which collectively means the periods before COVID-19 and during COVID-19, and includes data from 238,152 patients. Comparing statistics on daily patient volumes, average LOS, and resource usage, both before and during the COVID-19 pandemic, we found that patient characteristics and demographics changed in COVID-19. While 18.92% and 27.22% of the patients required laboratory and radiologic imaging tests before-COVID-19 study period, these percentages were increased to 31.52% and 39.46% during-COVID-19 study period. By analyzing the effects of policy-based variables in the model, we concluded that policies might cause sharp decreases in patient volumes. While the total number of patients arriving before-COVID-19 was 158,347, it decreased to 79,805 during-COVID-19. On the other hand, while the average daily LOS was 117.53 min before-COVID-19, this value was calculated to be 165,03 min during-COVID-19 study period. We finally showed that the model had a prediction accuracy of between 80 to 95%. While proposing an efficient model for sustainable operations management in EDs for dynamically changing environments caused by emergencies, it empirically investigates the impact of different policies on ED operations.
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Affiliation(s)
- Görkem Sariyer
- Yasar University, Department of Business Administration, İzmir, Turkey
| | - Mustafa Gokalp Ataman
- Bakırçay University Çiğli Region Training and Research Hospital, Department of Emergency Medicine, İzmir, Turkey
| | - Sachin Kumar Mangla
- Digital Circular Economy for Sustainbale Development Goals (DCE-SDG), Jindal Global Business School, O P Jindal Global University, Haryana, India
| | - Yigit Kazancoglu
- Yasar University, Department of Logistics Management, İzmir, Turkey
| | - Manoj Dora
- Sustainable Production and Consumption School of Management Anglia Ruskin University, Cambridge, UK
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6
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Abstract
Hesitant attitudes have been a significant issue since the development of the first vaccines-the WHO sees them as one of the most critical global health threats. The increasing use of social media to spread questionable information about vaccination strongly impacts the population's decision to get vaccinated. Developing text classification methods that can identify hesitant messages on social media could be useful for health campaigns in their efforts to address negative influences from social media platforms and provide reliable information to support their strategies against hesitant-vaccination sentiments. This study aims to evaluate the performance of different machine learning models and deep learning methods in identifying vaccine-hesitant tweets that are being published during the COVID-19 pandemic. Our concluding remarks are that Long Short-Term Memory and Recurrent Neural Network models have outperformed traditional machine learning models on detecting vaccine-hesitant messages in social media, with an accuracy rate of 86% against 83%.
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Affiliation(s)
- Serge Nyawa
- Department of Information, Operations and Management Sciences, TBS Business School, 1 Place Alphonse Jourdain, 31068 Toulouse, France
| | - Dieudonné Tchuente
- Department of Information, Operations and Management Sciences, TBS Business School, 1 Place Alphonse Jourdain, 31068 Toulouse, France
| | - Samuel Fosso-Wamba
- Department of Information, Operations and Management Sciences, TBS Business School, 1 Place Alphonse Jourdain, 31068 Toulouse, France
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7
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Masood S, Khan R, Abd El-Latif AA, Ahmad M. An FCN-LSTM model for neurological status detection from non-invasive multivariate sensor data. Neural Comput Appl 2022. [DOI: 10.1007/s00521-022-07117-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Jiang L, Chen D, Cao Z, Wu F, Zhu H, Zhu F. A two-stage deep learning architecture for radiographic staging of periodontal bone loss. BMC Oral Health 2022; 22:106. [PMID: 35365122 PMCID: PMC8973652 DOI: 10.1186/s12903-022-02119-z] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Accepted: 03/14/2022] [Indexed: 12/13/2022] Open
Abstract
Background Radiographic periodontal bone loss is one of the most important basis for periodontitis staging, with problems such as limited accuracy, inconsistency, and low efficiency in imaging diagnosis. Deep learning network may be a solution to improve the accuracy and efficiency of periodontitis imaging staging diagnosis. This study aims to establish a comprehensive and accurate radiological staging model of periodontal alveolar bone loss based on panoramic images. Methods A total of 640 panoramic images were included, and 3 experienced periodontal physicians marked the key points needed to calculate the degree of periodontal alveolar bone loss and the specific location and shape of the alveolar bone loss. A two-stage deep learning architecture based on UNet and YOLO-v4 was proposed to localize the tooth and key points, so that the percentage of periodontal alveolar bone loss was accurately calculated and periodontitis was staged. The ability of the model to recognize these features was evaluated and compared with that of general dental practitioners. Results The overall classification accuracy of the model was 0.77, and the performance of the model varied for different tooth positions and categories; model classification was generally more accurate than that of general practitioners. Conclusions It is feasible to establish deep learning model for assessment and staging radiographic periodontal alveolar bone loss using two-stage architecture based on UNet and YOLO-v4.
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Affiliation(s)
- Linhong Jiang
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Hangzhou, 310006, China
| | - Daqian Chen
- School of Computer Science and Technology, Zhejiang University of Technology, Hangzhou, 310006, China
| | - Zheng Cao
- College of Computer Science and Technology, Zhejiang University, Hangzhou, 310006, China
| | - Fuli Wu
- School of Computer Science and Technology, Zhejiang University of Technology, Hangzhou, 310006, China
| | - Haihua Zhu
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Hangzhou, 310006, China.
| | - Fudong Zhu
- Stomatology Hospital, School of Stomatology, Zhejiang University School of Medicine, Zhejiang Provincial Clinical Research Center for Oral Diseases, Key Laboratory of Oral Biomedical Research of Zhejiang Province, Cancer Center of Zhejiang University, Hangzhou, 310006, China.
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9
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Ghadir AH, Vandchali HR, Fallah M, Tirkolaee EB. Evaluating the impacts of COVID-19 outbreak on supply chain risks by modified failure mode and effects analysis: a case study in an automotive company. Ann Oper Res 2022:1-31. [PMID: 35378835 PMCID: PMC8968776 DOI: 10.1007/s10479-022-04651-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 03/03/2022] [Indexed: 05/17/2023]
Abstract
Supply chains have been facing many disruptions due to natural and man-made disasters. Recently, the global pandemic caused by COVID-19 outbreak, has severely hit trade and investment worldwide. Companies around the world faced significant disruption in their supply chains. This study aims to explore the impacts of COVID-19 outbreak on supply chain risks (SCRs). Based on a comprehensive literature review on supply chain risk management, 70 risks are identified and listed in 7 categories including demand, supply, logistics, political, manufacturing, financial and information. Then, a modified failure mode and effects analysis (FMEA) is proposed to assess the identified SCRs, which integrates FMEA and best-worst method to provide a double effectiveness. The results demonstrate the efficiency of the proposed method, and according to the main findings, "insufficient information about demand quantities", "shortages on supply markets", "bullwhip effect", "loss of key suppliers", "transportation breakdowns", "suppliers", "on-time delivery", "government restrictions", "suppliers' temporary closure", "market demand change" and "single supply sourcing" are the top 10 SCRs during the COVID-19 outbreak, respectively. Finally, the practical implications are discussed and useful managerial insights are recommended.
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Affiliation(s)
| | | | - Masoud Fallah
- Faculty of Management, Economics and Engineering of Progress, Iran University of Science and Technology, Tehran, Iran
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10
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Ahmad I, Qayyum A, Gupta BB, Alassafi MO, Alghamdi RA. Ensemble of 2D Residual Neural Networks Integrated with Atrous Spatial Pyramid Pooling Module for Myocardium Segmentation of Left Ventricle Cardiac MRI. Mathematics 2022; 10:627. [DOI: 10.3390/math10040627] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Cardiac disease diagnosis and identification is problematic mostly by inaccurate segmentation of the cardiac left ventricle (LV). Besides, LV segmentation is challenging since it involves complex and variable cardiac structures in terms of components and the intricacy of time-based crescendos. In addition, full segmentation and quantification of the LV myocardium border is even more challenging because of different shapes and sizes of the myocardium border zone. The foremost purpose of this research is to design a precise automatic segmentation technique employing deep learning models for the myocardium border using cardiac magnetic resonance imaging (MRI). The ASPP module (Atrous Spatial Pyramid Pooling) was integrated with a proposed 2D-residual neural network for segmentation of the myocardium border using a cardiac MRI dataset. Further, the ensemble technique based on a majority voting ensemble method was used to blend the results of recent deep learning models on different set of hyperparameters. The proposed model produced an 85.43% dice score on validation samples and 98.23% on training samples and provided excellent performance compared to recent deep learning models. The myocardium border was successfully segmented across diverse subject slices with different shapes, sizes and contrast using the proposed deep learning ensemble models. The proposed model can be employed for automatic detection and segmentation of the myocardium border for precise quantification of reflow, myocardial infarction, myocarditis, and h cardiomyopathy (HCM) for clinical applications.
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Chatterjee S, Chaudhuri R, Vrontis D, Papadopoulos T. Examining the impact of deep learning technology capability on manufacturing firms: moderating roles of technology turbulence and top management support. Ann Oper Res 2022:1-21. [PMID: 35125588 PMCID: PMC8800827 DOI: 10.1007/s10479-021-04505-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 12/15/2021] [Indexed: 06/14/2023]
Abstract
Data science can create value by extracting structured and unstructured data using an appropriate algorithm. Data science operations have undergone drastic changes because of accelerated deep learning progress. Deep learning is an advanced process of machine learning algorithm. Its simple process of presenting data to the system is sharply different from other machine learning processes. Deep learning uses advanced analytics to solve complex problems for accurate business decisions. Deep leaning is considered a promising area for creating additional value in firms' productivity and sustainability as they develop their smart manufacturing activities. Deep learning capability can help a manufacturing firm's predictive maintenance, quality control, and anomaly detection. The impact of deep learning technology capability on manufacturing firms is an underexplored area in the literature. With this background, the purpose of this study is to examine the impact of deep learning technology capability on manufacturing firms with moderating roles of deep learning related technology turbulence and top management support of the manufacturing firms. With the help of literature review and theories, a conceptual model has been prepared, which is then validated with the PLS-SEM technique analyzing 473 responses from employees of manufacturing firms. The study shows the significance of deep learning technology capability on smart manufacturing systems. Also, the study highlights the moderating impacts of top management team (TMT) support as well as the moderating impacts of deep learning related technology turbulence on smart manufacturing systems.
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Affiliation(s)
- Sheshadri Chatterjee
- Department of Computer Science and Engineering, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal India
| | - Ranjan Chaudhuri
- Department of Marketing, National Institute of Industrial Engineering (NITIE), Mumbai, India
| | - Demetris Vrontis
- Faculty and Research, Strategic Management, School of Business, University of Nicosia, Nicosia, Cyprus
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12
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Birim S, Kazancoglu I, Mangla SK, Kahraman A, Kazancoglu Y. The derived demand for advertising expenses and implications on sustainability: a comparative study using deep learning and traditional machine learning methods. Ann Oper Res 2022:1-31. [PMID: 35017781 PMCID: PMC8736292 DOI: 10.1007/s10479-021-04429-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 11/10/2021] [Indexed: 05/02/2023]
Abstract
In recent years, machine learning models based on big data have been introduced into marketing in order to transform customer data into meaningful insights and to make strategic decisions by making more accurate predictions. Although there is a large amount of literature on demand forecasting, there is a lack of research about how marketing strategies such as advertising and other promotional activities affect demand. Therefore, an accurate demand-forecasting model can make significant academic and practical contributions for business sustainability. The purpose of this article is to evaluate machine learning methods to provide accuracy in forecasting demand based on advertising expenses. The study focuses on a prediction mechanism based on several Machine Learning techniques-Support Vector Regression (SVR), Random Forest Regression (RFR) and Decision Tree Regressor (DTR) and deep learning techniques-Artificial Neural Network (ANN), Long Short Term Memory (LSTM),-to deal with demand forecasting based on advertising expenses. Deep learning is a powerful technique that can solve marketing problems based on both classification and regression algorithms. Accordingly, a television manufacturer's real market dataset consisting of advertising expenditures, sales and demand forecasting via chosen machine learning methods was analyzed and compared in terms of the accuracy of demand forecasting. As a result, Long Short Term Memory has been found to be superior to other models in providing highly accurate prediction results for demand forecasting based on advertising expenses.
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Affiliation(s)
- Sule Birim
- Department of Business Administration, Salihli Faculty of Economics and Administrative Sciences, Manisa Celal Bayar University, Manisa, Turkey
| | - Ipek Kazancoglu
- Department of Business Administration, Faculty of Economics and Administrative Sciences, Ege University, İzmir, Turkey
| | - Sachin Kumar Mangla
- OP Jindal Global University, Jindal Global Business School, Operations Management, Haryana, India
| | - Aysun Kahraman
- Department of Business Administration, Salihli Faculty of Economics and Administrative Sciences, Manisa Celal Bayar University , Manisa, Turkey
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Gillman AG, Lunardo F, Prinable J, Belous G, Nicolson A, Min H, Terhorst A, Dowling JA. Automated COVID-19 diagnosis and prognosis with medical imaging and who is publishing: a systematic review. Phys Eng Sci Med 2021; 45:13-29. [PMID: 34919204 PMCID: PMC8678975 DOI: 10.1007/s13246-021-01093-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Accepted: 12/13/2021] [Indexed: 12/31/2022]
Abstract
Objectives: To conduct a systematic survey of published techniques for automated diagnosis and prognosis of COVID-19 diseases using medical imaging, assessing the validity of reported performance and investigating the proposed clinical use-case. To conduct a scoping review into the authors publishing such work. Methods: The Scopus database was queried and studies were screened for article type, and minimum source normalized impact per paper and citations, before manual relevance assessment and a bias assessment derived from a subset of the Checklist for Artificial Intelligence in Medical Imaging (CLAIM). The number of failures of the full CLAIM was adopted as a surrogate for risk-of-bias. Methodological and performance measurements were collected from each technique. Each study was assessed by one author. Comparisons were evaluated for significance with a two-sided independent t-test. Findings: Of 1002 studies identified, 390 remained after screening and 81 after relevance and bias exclusion. The ratio of exclusion for bias was 71%, indicative of a high level of bias in the field. The mean number of CLAIM failures per study was 8.3 ± 3.9 [1,17] (mean ± standard deviation [min,max]). 58% of methods performed diagnosis versus 31% prognosis. Of the diagnostic methods, 38% differentiated COVID-19 from healthy controls. For diagnostic techniques, area under the receiver operating curve (AUC) = 0.924 ± 0.074 [0.810,0.991] and accuracy = 91.7% ± 6.4 [79.0,99.0]. For prognostic techniques, AUC = 0.836 ± 0.126 [0.605,0.980] and accuracy = 78.4% ± 9.4 [62.5,98.0]. CLAIM failures did not correlate with performance, providing confidence that the highest results were not driven by biased papers. Deep learning techniques reported higher AUC (p < 0.05) and accuracy (p < 0.05), but no difference in CLAIM failures was identified. Interpretation: A majority of papers focus on the less clinically impactful diagnosis task, contrasted with prognosis, with a significant portion performing a clinically unnecessary task of differentiating COVID-19 from healthy. Authors should consider the clinical scenario in which their work would be deployed when developing techniques. Nevertheless, studies report superb performance in a potentially impactful application. Future work is warranted in translating techniques into clinical tools.
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Affiliation(s)
- Ashley G Gillman
- Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia.
| | - Febrio Lunardo
- Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia.,College of Science and Engineering, James Cook University, Australian Tropical Science Innovation Precinct, Townsville, QLD, 4814, Australia
| | - Joseph Prinable
- ACRF Image X Institute, University of Sydney, Level 2, Biomedical Building (C81), 1 Central Ave, Australian Technology Park, Eveleigh, Sydney, NSW, 2015, Australia
| | - Gregg Belous
- Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia
| | - Aaron Nicolson
- Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia
| | - Hang Min
- Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia
| | - Andrew Terhorst
- Data61, Commonwealth Scientific and Industrial Research Organisation, College Road, Sandy Bay, Hobart, TAS, 7005, Australia
| | - Jason A Dowling
- Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Surgical Treatment and Rehabilitation Service, 296 Herston Road, Brisbane, QLD, 4029, Australia
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14
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Qayyum A, Mazhar M, Razzak I, Bouadjenek MR. Multilevel depth-wise context attention network with atrous mechanism for segmentation of COVID19 affected regions. Neural Comput Appl 2021; 35:1-13. [PMID: 34720443 PMCID: PMC8546198 DOI: 10.1007/s00521-021-06636-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Accepted: 10/13/2021] [Indexed: 12/02/2022]
Abstract
Severe acute respiratory syndrome coronavirus (SARS-CoV-2) also named COVID-19, aggressively spread all over the world in just a few months. Since then, it has multiple variants that are far more contagious than its parent. Rapid and accurate diagnosis of COVID-19 and its variants are crucial for its treatment, analysis of lungs damage and quarantine management. Deep learning-based solution for efficient and accurate diagnosis to COVID-19 and its variants using Chest X-rays, and computed tomography images could help to counter its outbreak. This work presents a novel depth-wise residual network with an atrous mechanism for accurate segmentation and lesion location of COVID-19 affected areas using volumetric CT images. The proposed framework consists of 3D depth-wise and 3D residual squeeze and excitation block in cascaded and parallel to capture uniformly multi-scale context (low-level detailed, mid-level comprehensive and high-level rich semantic features). The squeeze and excitation block adaptively recalibrates channel-wise feature responses by explicitly modeling inter-dependencies between various channels. We further have introduced an atrous mechanism with a different atrous rate as the bottom layer. Extensive experiments on benchmark CT datasets showed considerable gain (5%) for accurate segmentation and lesion location of COVID-19 affected areas.
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Affiliation(s)
- Abdul Qayyum
- Computer Science Department, University of Burgundy, Dijon, France
| | - Mona Mazhar
- Department of Computer Engineering and Mathematics, University Rovira i Virgili, Tarragona, Spain
| | - Imran Razzak
- School of Information Technology, Deakin University, Geelong, Australia
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15
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Aljumah A. Assessment of Machine Learning Techniques in IoT-Based Architecture for the Monitoring and Prediction of COVID-19. Electronics 2021; 10:1834. [DOI: 10.3390/electronics10151834] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
From the end of 2019, the world has been facing the threat of COVID-19. It is predicted that, before herd immunity is achieved globally via vaccination, people around the world will have to tackle the COVID-19 pandemic using precautionary steps. This paper suggests a COVID-19 identification and control system that operates in real-time. The proposed system utilizes the Internet of Things (IoT) platform to capture users’ time-sensitive symptom information to detect potential cases of coronaviruses early on, to track the clinical measures adopted by survivors, and to gather and examine appropriate data to verify the existence of the virus. There are five key components in the framework: symptom data collection and uploading (via communication technology), a quarantine/isolation center, an information processing core (using artificial intelligent techniques), cloud computing, and visualization to healthcare doctors. This research utilizes eight machine/deep learning techniques—Neural Network, Decision Table, Support Vector Machine (SVM), Naive Bayes, OneR, K-Nearest Neighbor (K-NN), Dense Neural Network (DNN), and the Long Short-Term Memory technique—to detect coronavirus cases from time-sensitive information. A simulation was performed to verify the eight algorithms, after selecting the relevant symptoms, on real-world COVID-19 data values. The results showed that five of these eight algorithms obtained an accuracy of over 90%. Conclusively, it is shown that real-world symptomatic information would enable these three algorithms to identify potential COVID-19 cases effectively with enhanced accuracy. Additionally, the framework presents responses to treatment for COVID-19 patients.
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