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For: Zhang S, Wang Q, Xie S. Stable isotope probing identifies anthracene degraders under methanogenic conditions. Biodegradation 2012;23:221-30. [DOI: 10.1007/s10532-011-9501-1] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2011] [Accepted: 07/22/2011] [Indexed: 10/17/2022]
Number Cited by Other Article(s)
1
Wang Y, Li A, Zou B, Qian Y, Li X, Sun Z. The Combination of Buchloe dactyloides Engelm and Biochar Promotes the Remediation of Soil Contaminated with Polycyclic Aromatic Hydrocarbons. Microorganisms 2024;12:968. [PMID: 38792797 PMCID: PMC11124401 DOI: 10.3390/microorganisms12050968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Revised: 04/17/2024] [Accepted: 04/29/2024] [Indexed: 05/26/2024]  Open
2
Min Z, Rui T, Yu L. A combination of microbial electrolysis cells and bioaugmentation can effectively treat synthetic wastewater containing polycyclic aromatic hydrocarbon. WATER SCIENCE AND TECHNOLOGY : A JOURNAL OF THE INTERNATIONAL ASSOCIATION ON WATER POLLUTION RESEARCH 2024;89:2716-2731. [PMID: 38822610 DOI: 10.2166/wst.2024.156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Accepted: 05/02/2024] [Indexed: 06/03/2024]
3
Dong S, Yan PF, Mezzari MP, Abriola LM, Pennell KD, Cápiro NL. Using Network Analysis and Predictive Functional Analysis to Explore the Fluorotelomer Biotransformation Potential of Soil Microbial Communities. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2024;58:7480-7492. [PMID: 38639388 DOI: 10.1021/acs.est.4c00942] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/20/2024]
4
DNA stable isotope probing on soil treated by plant biostimulation and flooding revealed the bacterial communities involved in PCB degradation. Sci Rep 2022;12:19232. [PMID: 36357494 PMCID: PMC9649793 DOI: 10.1038/s41598-022-23728-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Accepted: 11/04/2022] [Indexed: 11/12/2022]  Open
5
Chai G, Wang D, Shan J, Jiang C, Yang Z, Liu E, Meng H, Wang H, Wang Z, Qin L, Xi J, Ma Y, Li H, Qian Y, Li J, Lin Y. Accumulation of high-molecular-weight polycyclic aromatic hydrocarbon impacted the performance and microbial ecology of bioretention systems. CHEMOSPHERE 2022;298:134314. [PMID: 35292274 DOI: 10.1016/j.chemosphere.2022.134314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2021] [Revised: 02/13/2022] [Accepted: 03/11/2022] [Indexed: 06/14/2023]
6
Zhang Z, Guo H, Sun J, Gong X, Wang C, Wang H. Anaerobic phenanthrene biodegradation by a newly isolated sulfate-reducer, strain PheS1, and exploration of the biotransformation pathway. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021;797:149148. [PMID: 34311378 DOI: 10.1016/j.scitotenv.2021.149148] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2021] [Revised: 07/14/2021] [Accepted: 07/15/2021] [Indexed: 06/13/2023]
7
Wang YQ, Wang MX, Chen YY, Li CM, Zhou ZF. Microbial community structure and co-occurrence are essential for methanogenesis and its contribution to phenanthrene degradation in paddy soil. JOURNAL OF HAZARDOUS MATERIALS 2021;417:126086. [PMID: 34020358 DOI: 10.1016/j.jhazmat.2021.126086] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 04/29/2021] [Accepted: 05/10/2021] [Indexed: 06/12/2023]
8
Sengupta K, Pal S. A review on microbial diversity and genetic markers involved in methanogenic degradation of hydrocarbons: futuristic prospects of biofuel recovery from contaminated regions. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021;28:40288-40307. [PMID: 33844144 DOI: 10.1007/s11356-021-13666-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Accepted: 03/23/2021] [Indexed: 06/12/2023]
9
Rajbongshi A, Gogoi SB. A review on anaerobic microorganisms isolated from oil reservoirs. World J Microbiol Biotechnol 2021;37:111. [PMID: 34076736 DOI: 10.1007/s11274-021-03080-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Accepted: 05/26/2021] [Indexed: 11/25/2022]
10
Wang B, Teng Y, Yao H, Christie P. Detection of functional microorganisms in benzene [a] pyrene-contaminated soils using DNA-SIP technology. JOURNAL OF HAZARDOUS MATERIALS 2021;407:124788. [PMID: 33321373 DOI: 10.1016/j.jhazmat.2020.124788] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2020] [Revised: 12/03/2020] [Accepted: 12/04/2020] [Indexed: 06/12/2023]
11
Dhar K, Subashchandrabose SR, Venkateswarlu K, Krishnan K, Megharaj M. Anaerobic Microbial Degradation of Polycyclic Aromatic Hydrocarbons: A Comprehensive Review. REVIEWS OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2020;251:25-108. [PMID: 31011832 DOI: 10.1007/398_2019_29] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
12
Ye Q, Liang C, Chen X, Fang T, Wang Y, Wang H. Molecular characterization of methanogenic microbial communities for degrading various types of polycyclic aromatic hydrocarbon. J Environ Sci (China) 2019;86:97-106. [PMID: 31787194 DOI: 10.1016/j.jes.2019.04.027] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2018] [Revised: 04/24/2019] [Accepted: 04/25/2019] [Indexed: 06/10/2023]
13
Thomas F, Corre E, Cébron A. Stable isotope probing and metagenomics highlight the effect of plants on uncultured phenanthrene-degrading bacterial consortium in polluted soil. THE ISME JOURNAL 2019;13:1814-1830. [PMID: 30872807 PMCID: PMC6775975 DOI: 10.1038/s41396-019-0394-z] [Citation(s) in RCA: 77] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2018] [Revised: 02/08/2019] [Accepted: 02/28/2019] [Indexed: 11/09/2022]
14
Stable Isotope and Metagenomic Profiling of a Methanogenic Naphthalene-Degrading Enrichment Culture. Microorganisms 2018;6:microorganisms6030065. [PMID: 29996505 PMCID: PMC6164631 DOI: 10.3390/microorganisms6030065] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Revised: 07/02/2018] [Accepted: 07/08/2018] [Indexed: 11/23/2022]  Open
15
Song M, Jiang L, Zhang D, Luo C, Wang Y, Yu Z, Yin H, Zhang G. Bacteria capable of degrading anthracene, phenanthrene, and fluoranthene as revealed by DNA based stable-isotope probing in a forest soil. JOURNAL OF HAZARDOUS MATERIALS 2016;308:50-57. [PMID: 26808242 DOI: 10.1016/j.jhazmat.2016.01.009] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2015] [Revised: 12/30/2015] [Accepted: 01/06/2016] [Indexed: 06/05/2023]
16
Meckenstock RU, Boll M, Mouttaki H, Koelschbach JS, Cunha Tarouco P, Weyrauch P, Dong X, Himmelberg AM. Anaerobic Degradation of Benzene and Polycyclic Aromatic Hydrocarbons. J Mol Microbiol Biotechnol 2016;26:92-118. [DOI: 10.1159/000441358] [Citation(s) in RCA: 180] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
17
Vogt C, Lueders T, Richnow HH, Krüger M, von Bergen M, Seifert J. Stable Isotope Probing Approaches to Study Anaerobic Hydrocarbon Degradation and Degraders. J Mol Microbiol Biotechnol 2016;26:195-210. [DOI: 10.1159/000440806] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
18
Jiménez N, Richnow HH, Vogt C, Treude T, Krüger M. Methanogenic Hydrocarbon Degradation: Evidence from Field and Laboratory Studies. J Mol Microbiol Biotechnol 2016;26:227-42. [PMID: 26959375 DOI: 10.1159/000441679] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
19
Cupples AM. Contaminant-Degrading Microorganisms Identified Using Stable Isotope Probing. Chem Eng Technol 2016. [DOI: 10.1002/ceat.201500479] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
20
Ladino-Orjuela G, Gomes E, da Silva R, Salt C, Parsons JR. Metabolic Pathways for Degradation of Aromatic Hydrocarbons by Bacteria. REVIEWS OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2016;237:105-121. [PMID: 26613990 DOI: 10.1007/978-3-319-23573-8_5] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
21
Identification of benzo[a]pyrene-metabolizing bacteria in forest soils by using DNA-based stable-isotope probing. Appl Environ Microbiol 2015;81:7368-76. [PMID: 26253666 DOI: 10.1128/aem.01983-15] [Citation(s) in RCA: 73] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2015] [Accepted: 08/02/2015] [Indexed: 01/21/2023]  Open
22
Braun F, Hamelin J, Bonnafous A, Delgenès N, Steyer JP, Patureau D. Similar PAH fate in anaerobic digesters inoculated with three microbial communities accumulating either volatile fatty acids or methane. PLoS One 2015;10:e0125552. [PMID: 25874750 PMCID: PMC4398385 DOI: 10.1371/journal.pone.0125552] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2014] [Accepted: 03/25/2015] [Indexed: 02/01/2023]  Open
23
Wang Z, Yang Y, Sun W, Dai Y, Xie S. Variation of nonylphenol-degrading gene abundance and bacterial community structure in bioaugmented sediment microcosm. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015;22:2342-2349. [PMID: 25277711 DOI: 10.1007/s11356-014-3625-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2014] [Accepted: 09/16/2014] [Indexed: 06/03/2023]
24
Liao X, Chen C, Zhang J, Dai Y, Zhang X, Xie S. Dimethylamine biodegradation by mixed culture enriched from drinking water biofilter. CHEMOSPHERE 2015;119:935-940. [PMID: 25280176 DOI: 10.1016/j.chemosphere.2014.09.020] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2014] [Revised: 08/26/2014] [Accepted: 09/05/2014] [Indexed: 06/03/2023]
25
Yang Y, Wang J, Liao J, Xie S, Huang Y. Distribution of naphthalene dioxygenase genes in crude oil-contaminated soils. MICROBIAL ECOLOGY 2014;68:785-793. [PMID: 25008984 DOI: 10.1007/s00248-014-0457-7] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2014] [Accepted: 06/27/2014] [Indexed: 06/03/2023]
26
Wang Z, Yang Y, Sun W, Xie S, Liu Y. Nonylphenol biodegradation in river sediment and associated shifts in community structures of bacteria and ammonia-oxidizing microorganisms. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2014;106:1-5. [PMID: 24836870 DOI: 10.1016/j.ecoenv.2014.04.019] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2014] [Revised: 04/17/2014] [Accepted: 04/19/2014] [Indexed: 06/03/2023]
27
Gieg LM, Fowler SJ, Berdugo-Clavijo C. Syntrophic biodegradation of hydrocarbon contaminants. Curr Opin Biotechnol 2014;27:21-9. [DOI: 10.1016/j.copbio.2013.09.002] [Citation(s) in RCA: 168] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2013] [Revised: 09/04/2013] [Accepted: 09/06/2013] [Indexed: 11/30/2022]
28
Berdugo-Clavijo C, Gieg LM. Conversion of crude oil to methane by a microbial consortium enriched from oil reservoir production waters. Front Microbiol 2014;5:197. [PMID: 24829563 PMCID: PMC4017130 DOI: 10.3389/fmicb.2014.00197] [Citation(s) in RCA: 84] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2014] [Accepted: 04/14/2014] [Indexed: 11/13/2022]  Open
29
Wan R, Wang Z, Xie S. Dynamics of communities of bacteria and ammonia-oxidizing microorganisms in response to simazine attenuation in agricultural soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2014;472:502-508. [PMID: 24317158 DOI: 10.1016/j.scitotenv.2013.11.090] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2013] [Revised: 11/11/2013] [Accepted: 11/18/2013] [Indexed: 06/02/2023]
30
Yang Y, Wang Z, Xie S. Aerobic biodegradation of bisphenol A in river sediment and associated bacterial community change. THE SCIENCE OF THE TOTAL ENVIRONMENT 2014;470-471:1184-1188. [PMID: 24246941 DOI: 10.1016/j.scitotenv.2013.10.102] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2013] [Revised: 10/25/2013] [Accepted: 10/27/2013] [Indexed: 06/02/2023]
31
Dunlevy SR, Singleton DR, Aitken MD. Biostimulation Reveals Functional Redundancy of Anthracene-Degrading Bacteria in Polycyclic Aromatic Hydrocarbon-Contaminated Soil. ENVIRONMENTAL ENGINEERING SCIENCE 2013;30:697-705. [PMID: 24302851 PMCID: PMC3833303 DOI: 10.1089/ees.2013.0067] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2013] [Accepted: 05/28/2013] [Indexed: 05/25/2023]
32
Xie S, Wan R, Wang Z, Wang Q. Atrazine biodegradation by Arthrobacter strain DAT1: effect of glucose supplementation and change of the soil microbial community. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2013;20:4078-4084. [PMID: 23224504 DOI: 10.1007/s11356-012-1356-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2012] [Accepted: 11/21/2012] [Indexed: 06/01/2023]
33
Zhou X, Wang Q, Wang Z, Xie S. Nitrogen impacts on atrazine-degrading Arthrobacter strain and bacterial community structure in soil microcosms. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2013;20:2484-2491. [PMID: 22961491 DOI: 10.1007/s11356-012-1168-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2012] [Accepted: 08/27/2012] [Indexed: 06/01/2023]
34
Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers. Appl Microbiol Biotechnol 2012;94:851-73. [PMID: 22476263 DOI: 10.1007/s00253-012-4025-0] [Citation(s) in RCA: 69] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2012] [Revised: 03/13/2012] [Accepted: 03/14/2012] [Indexed: 02/06/2023]
35
Wan R, Zhang S, Xie S. Microbial community changes in aquifer sediment microcosm for anaerobic anthracene biodegradation under methanogenic condition. J Environ Sci (China) 2012;24:1498-1503. [PMID: 23513693 DOI: 10.1016/s1001-0742(11)60959-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
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