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Modak D, Ghosh S, Sarkar S, Roy SK, Chakraborty A, Ray A, Patel CN, Georrge JJ, Thakur S, Bhattacharjee S. Unveiling the mechanism of amelioration of adjuvant-induced rheumatoid arthritis by Drynaria quercifolia rhizome extract using network pharmacology and gene expression-based studies. Sci Rep 2025; 15:11981. [PMID: 40199969 PMCID: PMC11978801 DOI: 10.1038/s41598-025-87461-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2024] [Accepted: 01/20/2025] [Indexed: 04/10/2025] Open
Abstract
Rhizomes of Drynaria quercifolia have long been traditionally used to manage rheumatic pain. However, there is limited research supporting this traditional practice and insufficient evidence demonstrating the molecular mechanisms of action of plant-derived bioactives in rheumatoid arthritis (RA). The current study aims to identify the effective components in Drynaria quercifolia methanol rhizome extract (DME) and their probable pharmacological mechanisms in alleviating Rheumatoid Arthritis (RA) using network-pharmacology, molecular docking, molecular-dynamics simulations, and gene expression-based validation. Gas chromatography-mass spectrometry (GC-MS) based screening identified 41 volatile phytocomponents from DME having drug-like potentiality. Network pharmacology-based screening revealed 117 therapeutic targets for RA of which 11 have been identified as core targets. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis indicated that key target genes were mostly enriched in the inflammatory response associated with multiple signalling pathways. Molecular docking and molecular dynamics studies revealed that key target proteins like serine/threonine-protein kinase (AKT1), peroxisome proliferator-activated receptor alpha (PPARA), and peroxisome proliferator-activated receptor gamma (PPARG), exhibited strong binding affinity and stable interactions with multiple phytocomponents present in DME. For experimental verification FCA (Freund's complete adjuvant)-induced chronic arthritis model employed for further molecular investigation. Quantitative reverse transcription polymerase chain reaction (qRT-PCR) results validated that DME significantly (p ≤ 0.05) regulate the expression of key identified target genes AKT and PPARG in experimental RA model. Moreover, this study further confirmed that DME significantly (p ≤ 0.05) downregulated pro-inflammatory mediators like COX-2, IL-6 and TNF-α at gene and protein levels and also normalized (p ≤ 0.05) different oxidative stress parameters in both the low and high dose groups of DME-treated arthritic animals. In conclusion, the network-based in silico approach indicated that the phytocomponents present in DME probably act in a synergistic way to modulate key identified targets associated with RA, which was further validated by experimental studies. Therefore, DME could be a potential alternative in immunomodulatory therapies to combat RA and related chronic inflammatory conditions.
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Affiliation(s)
- Debabrata Modak
- Cell and Molecular Biology Laboratory, Department of Zoology, University of North Bengal, Raja Rammohunpur, Darjeeling, 734013, West Bengal, India
- Department of Bioinformatics, University of North Bengal, Raja Rammohunpur, Darjeeling, 734013, West Bengal, India
| | - Subhajit Ghosh
- Department of Bioinformatics, University of North Bengal, Raja Rammohunpur, Darjeeling, 734013, West Bengal, India
| | - Sourav Sarkar
- Cell and Molecular Biology Laboratory, Department of Zoology, University of North Bengal, Raja Rammohunpur, Darjeeling, 734013, West Bengal, India
| | - Sudipta K Roy
- Cell and Molecular Biology Laboratory, Department of Zoology, University of North Bengal, Raja Rammohunpur, Darjeeling, 734013, West Bengal, India
| | - Ayan Chakraborty
- Virus Research and Diagnostic Laboratory, North Bengal Medical College and Hospital, Darjeeling, 734012, West Bengal, India
| | - Arpita Ray
- Genetics and Molecular Biology Laboratory, Department of Zoology, University of North Bengal, Darjeeling, 734013, West Bengal, India
| | - Chirag N Patel
- Translational Gerontology Branch, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA
- Biotechnology Research Center, Technology Innovation Institute, Abu Dhabi, United Arab Emirates
| | - John J Georrge
- Department of Bioinformatics, University of North Bengal, Raja Rammohunpur, Darjeeling, 734013, West Bengal, India
| | - Subarna Thakur
- Department of Bioinformatics, University of North Bengal, Raja Rammohunpur, Darjeeling, 734013, West Bengal, India.
| | - Soumen Bhattacharjee
- Cell and Molecular Biology Laboratory, Department of Zoology, University of North Bengal, Raja Rammohunpur, Darjeeling, 734013, West Bengal, India.
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Oliveira LR, Vidal DM, Freitas TR, de P Sabino A, Duarte LP, de Sousa GF. Synthesis and Cytotoxic Activity of Friedelinyl Esters. Chem Biodivers 2024; 21:e202400652. [PMID: 38924342 DOI: 10.1002/cbdv.202400652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2024] [Revised: 06/15/2024] [Accepted: 06/22/2024] [Indexed: 06/28/2024]
Abstract
Commonly isolated from plants of Celastraceae family, pentacyclic triterpenoids have a broad spectrum of biological activities, such as antitumor, anti-inflammatory, antinociceptive properties, among others. Structural modifications in these triterpenoids can enhance their biological activity, as well as their selectivity, while improving their physicochemical and pharmacokinetic aspects. In this study, eight novel esters were synthesized: four derivatives of 3α-friedelinol (friedelan-3α-yl p-bromobenzoate (1a); friedelan-3α-yl naproxenate (1b); friedelan-3α-yl pent-4-ynoate (1c); friedelan-3α-yl undec-10-ynoate (1d)) and four derivatives of 3β-friedelinol (friedelan-3β-yl p-bromobenzoate (2a); friedelan-3β-yl naproxenate (2b); friedelan-3β-yl pent-4-ynoate (2c); friedelan-3β-yl undec-10-ynoate (2d)). Overall, 3α-friedelinol showed greater reactivity when compared to the β-epimer. The esters 1b-d and 2b-c were tested for antileukemic activity against THP-1 and K-562 cells but showed low cytotoxicity for both cell lines. The most active against THP-1 cells was friedelan-3β-yl naproxenate (2b, IC50=266±6 μM), and the most active against K-562 cells was friedelan-3α-yl pent-4-ynoate (1c, IC50=267±5 μM).
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Affiliation(s)
- Leila R Oliveira
- Departamento de Química, Universidade Federal de Minas Gerais, Avenida Presidente Antônio Carlos 6627, Pampulha, Belo Horizonte-MG, 31270-901, Brazil
| | - Diogo M Vidal
- Departamento de Química, Universidade Federal de Minas Gerais, Avenida Presidente Antônio Carlos 6627, Pampulha, Belo Horizonte-MG, 31270-901, Brazil
| | - Túlio R Freitas
- Departamento de Análises Clínicas e Toxicológicas, Faculdade de Farmácia, Universidade Federal de Minas Gerais, Avenida Presidente Antônio Carlos 6627, Pampulha, Belo Horizonte-MG, 31270-901, Brazil
| | - Adriano de P Sabino
- Departamento de Análises Clínicas e Toxicológicas, Faculdade de Farmácia, Universidade Federal de Minas Gerais, Avenida Presidente Antônio Carlos 6627, Pampulha, Belo Horizonte-MG, 31270-901, Brazil
| | - Lucienir P Duarte
- Departamento de Química, Universidade Federal de Minas Gerais, Avenida Presidente Antônio Carlos 6627, Pampulha, Belo Horizonte-MG, 31270-901, Brazil
| | - Grasiely F de Sousa
- Departamento de Química, Universidade Federal de Minas Gerais, Avenida Presidente Antônio Carlos 6627, Pampulha, Belo Horizonte-MG, 31270-901, Brazil
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Emmanuel Chimeh E, Nicodemus Emeka N, Florence Nkechi N, Amaechi Linda O, Oka Samon A, Emmanuel Chigozie A, Parker Elijah J, Barine Innocent N, Ezike Tobechukwu C, Nwachukwu Philip A, Hope Chimbuezie N, Chidimma Peace E, Onyinye Mary-Jane O, Godspower Chima N, Theresa Chinyere E, Alotaibi Saqer S, Albogami Sarah M, Gaber El-Saber B. Bioactive Compounds, anti-inflammatory, anti-nociceptive and antioxidant potentials of ethanolic leaf fraction of Sida linifolia L. (Malvaceae). ARAB J CHEM 2022. [DOI: 10.1016/j.arabjc.2022.104398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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