• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (5073861)   Today's Articles (184)
For: Bandyopadhyay D, Huan J, Prins J, Snoeyink J, Wang W, Tropsha A. Identification of family-specific residue packing motifs and their use for structure-based protein function prediction: II. Case studies and applications. J Comput Aided Mol Des 2009;23:785-97. [PMID: 19548090 DOI: 10.1007/s10822-009-9277-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2008] [Accepted: 04/22/2009] [Indexed: 11/25/2022]
Number Cited by Other Article(s)
1
Modulating Glycoside Hydrolase Activity between Hydrolysis and Transfer Reactions Using an Evolutionary Approach. Molecules 2021;26:molecules26216586. [PMID: 34770995 PMCID: PMC8587830 DOI: 10.3390/molecules26216586] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 10/27/2021] [Accepted: 10/28/2021] [Indexed: 01/02/2023]  Open
2
Deng L, Wu A, Dai W, Song T, Cui Y, Jiang T. Exploring protein domain organization by recognition of secondary structure packing interfaces. Bioinformatics 2014;30:2440-6. [PMID: 24813541 DOI: 10.1093/bioinformatics/btu327] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
3
Joo H, Chavan AG, Phan J, Day R, Tsai J. An amino acid packing code for α-helical structure and protein design. J Mol Biol 2012;419:234-54. [PMID: 22426125 DOI: 10.1016/j.jmb.2012.03.004] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2011] [Revised: 02/22/2012] [Accepted: 03/07/2012] [Indexed: 11/19/2022]
4
Day R, Lennox KP, Dahl DB, Vannucci M, Tsai JW. Characterizing the regularity of tetrahedral packing motifs in protein tertiary structure. ACTA ACUST UNITED AC 2010;26:3059-66. [PMID: 21047817 DOI: 10.1093/bioinformatics/btq573] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
5
Bandyopadhyay D, Huan J, Liu J, Prins J, Snoeyink J, Wang W, Tropsha A. Functional neighbors: inferring relationships between nonhomologous protein families using family-specific packing motifs. ACTA ACUST UNITED AC 2010;14:1137-43. [PMID: 20570776 DOI: 10.1109/titb.2010.2053550] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
6
Identification of family-specific residue packing motifs and their use for structure-based protein function prediction: I. Method development. J Comput Aided Mol Des 2009;23:773-84. [DOI: 10.1007/s10822-009-9273-4] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2008] [Accepted: 04/15/2009] [Indexed: 12/12/2022]
PrevPage 1 of 1 1Next
© 2004-2025 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA