Modification of Lys-6 and Lys-65 Affects the Structural Stability of Taiwan Cobra Phospholipase A2

Identifying residues in antigenic determinants by chemical modification

Chemical modification of the side chains of amino acid residues was one of the first methods developed to investigate epitopes in protein antigens. The principle of the method is that alteration of the structure of a key residue of an epitope by a chemical modification will alter reactivity with antibody by affecting either specificity or avidity or both. Chemical modification has the advantage that it can be applied to discontinuous as well as continuous epitopes and may be of value in identifying cryptic epitopes. We consider here the several recent studies that have applied site-specific chemical modification to the identification of epitopes on antigens, including the use of formaldehyde, glutaraldehyde, and acid anhydrides, to produce allergoids where determinants important to reaction with IgE are modified but the ability to elicit an IgG response is retained. It is noteworthy that modification of amino groups with charge reversal appears to be the most useful approach. The approach to the use of site-specific chemical modification as a tool for the study of protein function is discussed, and emphasis is placed on the necessity to (1) validate the specificity of modification and (2) assess potential conformational change that may occur secondary to modification. Finally, a list of chemical reagents used for protein modification is presented, together with properties and references to use.

Phospholipase A2 activity-independent membrane-damaging effect of notexin

To elucidate whether the phospholipase A(2) (PLA(2)) activity of notexin was exclusively associated with the manifestation of its pharmacological activities, the interaction of notexin with phospholipid liposomes was explored by fluorescence and CD measurement underlying the conditions of depriving its PLA(2) activity. Although a higher membrane-damaging activity was noted with Ca(2+)-bound notexin, abolishment of PLA(2) activity by EDTA and Sr(2+) could not diminish the membrane-damaging activity of notexin. Fluorescence-quenching studies and CD measurement indicated that Ca(2+)-bound, Sr(2+)-bound or metal-free notexin did not adopt the same conformation upon binding with phospholipids. Regardless of the presence of Ca(2+), Sr(2+) or EDTA, self-quenching assay with rhodamine-labeled notexin revealed that the toxin pertained to form oligomer when it bound with liposomes. Although Lys-modified notexin retained full PLA(2) activity, a notable decrease in membrane-damaging activity was observed. These results indicate that notexin could directly cause a leakage of membrane via a PLA(2) activity-independent manner, and implicate that another biological event contributes to the activity of notexin in vivo.