Electronic structure and UV–Vis spectra simulation of square planar Bis(1-(4-methylphenylazo)-2-naphtol)-Transition metal complexes [M(L)2]x (M = Ni, Pd, Pt, Cu, Ag, and x = − 1, 0, + 1): DFT and TD-DFT study

Molecular structures, chemical descriptors, and pancreatic lipase (1LPB) inhibition by natural products: a DFT investigation and molecular docking prediction

Density functional theory (DFT) calculations and molecular docking have been carried out on natural products containing eugenol, gingerol, ascorbic acid, oleurpoein, piperine, hesperidin, quercetin, Luteolin, and curcumin in order to predict their biological activities and to analyze their pancreatic lipase inhibition. The biological activity predictions are based on the global and local chemical descriptors, namely, HOMO-LUMO gaps, chemical hardness, chemical potential, electrophilicity, dipole moment, and Fukui functions. Our findings show that the studied compounds can be divided into two groups based on the chemical descriptors; the first group is composed of eugenol, gingerol, ascorbic acid, and oleuropein and the second one is composed of piperine, hesperidin, quercetin, Luteolin, and curcumin depending on the HOMO-LUMO gaps and electrophilicity values predicting best reactivity for the second group than the first one. The frontier orbitals offer a deeper insight concerning the electron donor and electron acceptor capabilities, whereas the local descriptors resulting from Fukui functions put emphasis on the active sites of different candidate ligands. The molecular docking was performed in order to compare and identify the inhibition activity of the natural candidate ligands against pancreatic lipase which were compared to that of synthesized ones. The molecular docking results revealed that the Luteolin compound has the best binding affinity of -8.56 kcal/mol due to their unique molecular structure and the position of -OH aromatic substituents.

Supplementary Information

The online version contains supplementary material available at 10.1007/s11224-023-02176-2.

Butadiyne-linked porphyrin nanoring as a highly selective O2 gas sensor: A fast response hybrid sensor

The butadiyne-linked six-metalloporphyrin nanoring (Mg₆-P₆) and it's complex with a hexapyridyl template, Mg₆-P₆·T₆ have a great potential for employment in future nanoelectronic applications such as a nanosensor for small gas molecules. The goal of this study is to scrutinize and improvement of the CO, N_2, and O₂ gas sensing capacity of Mg₆-P₆ and Mg₆-P₆·T₆ using DFT calculations at CAM-B3LYP/6-31G (d,p) level of theory. The geometrical structures, binding energies, band gaps, the density of states (DOS), adsorption energies, HOMO and LUMO energies, Fermi level energies (E_FL), NBO, FMO and TD-DFT spectrum were calculated to predict gas adsorption properties of Mg₆-P₆ and Mg₆-P₆·T₆ systems. Based on the calculated adsorption energies and remarkable decrease in the Eg, it is expected that the Mg₆-P₆ and Mg₆-P₆·T₆ are sensitive to O₂ molecule. Surprisingly, the Mg₆-P₆-O₂ and specially the Mg₆-P₆.T₆-O₂ record promising values of recovery times for different attempt frequencies. Therefore, the results open a way for the development of a new and selective O₂ nanosensor in the presence of CO and N₂ gas molecules.

Structural Insights into Influence of Isomerism on Properties of Open Shell Cobalt Coordination System

The two coordination compounds of cobalt were designed and synthesized. The substrates were carefully selected to allow gentle tuning of the molecular structure of the designed compounds. The crystal, molecular and supramolecular structure of studied compounds has been determined and discussed. The spectroscopic and thermal properties of designed coordination compounds have been studied and their application as precursors for the synthesis of cobalt oxide nanoparticles has been demonstrated. It was proven that not only are parameters of conversion of the precursor to nanoparticles important, but also small changes in molecular structure can considerably affect the size of formed particles. For unambiguous determination of the influence of compounds structure on their UV-Vis radiation absorption, density functional theory and time-dependent density functions theory calculations have been performed. The complexity of the correct ab-initio reflection of the open shell molecular system was outlined and discussed. The results obtained from density functional theory (DFT) calculations have been also employed for discussion of the bonding properties.