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Yao Z, Huang H, Zhang S, Wang S, Xia Q, Liu Z. Exploring the bladder tissue microbiome in patients with muscle-invasive bladder cancer using 2bRAD-M sequencing. ONCOLOGIE 2024; 26:395-406. [DOI: 10.1515/oncologie-2024-0079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/15/2025]
Abstract
Abstract
Objectives
The 2bRAD sequencing for Microbiome (2bRAD-M) represents an innovative and streamlined approach for the reconstruction of microbial profiles at the species level. In our investigation, we conducted 2bRAD-M analysis to characterize the microbiome of bladder tissue in patients with muscle-invasive bladder cancer (MIBC).
Methods
15 tumor tissues and 15 paired para-carcinoma tissues were obtained from the bladder excised during surgery. 2bRAD-M sequencing was used to assess the abundance of microorganisms in samples.
Results
The microbial community structure and biodiversity, as assessed at varying taxonomic ranks, exhibited a high degree of similarity between the tumor and paired non-tumor tissues. At the genus level, we observed a notably elevated abundance of Brachybacterium and Haloparvum, coupled with a diminished abundance of Anoxybacillus, Anoxybacillu_A, Deinococcus, NCEH01, and Pseudoxanthomonas_A in the tumor tissues. Meanwhile, at the species level, the non-tumor tissues exhibited an enrichment of Anoxybacillus_A rupiensis, Anoxybacillus flavithermus_G, Klebsiella quasipneumoniae, NCEH01 sp002304505, and Pseudoxanthomonas_A sp004284195. Linear discriminant analysis effect size (LEfSe) identified 29 discriminative features, characterized by significant variations (p<0.5, LDA≥2.0) in relative abundance between the two groups. Furthermore, an analysis of functional predictions utilizing Phylogenetic Investigation of Communities by Reconstruction of Unobserved States 2 (PICRUSt2) also uncovered disparities in the microbial functional composition.
Conclusions
This study identified several microorganisms that exhibit differences between MIBC tumor tissue and adjacent non-tumor tissue using 2bRAD-M sequencing, providing some insights into the potential association between the bladder microbiome and cancer.
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Affiliation(s)
- Zhipeng Yao
- Department of Urology, Tongji Hospital, Tongji Medical College , 12443 Huazhong University of Science and Technology , Wuhan , China
| | - He Huang
- Department of Urology , The Third People’s Hospital of Hubei Province , Wuhan , China
| | - Sihan Zhang
- Department of Urology, Tongji Hospital, Tongji Medical College , 12443 Huazhong University of Science and Technology , Wuhan , China
| | - Shaogang Wang
- Department of Urology, Tongji Hospital, Tongji Medical College , 12443 Huazhong University of Science and Technology , Wuhan , China
| | - Qidong Xia
- Department of Urology, Tongji Hospital, Tongji Medical College , 12443 Huazhong University of Science and Technology , Wuhan , China
| | - Zheng Liu
- Department of Urology, Tongji Hospital, Tongji Medical College , 12443 Huazhong University of Science and Technology , Wuhan , China
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A Case of Brevibacillus brevis Meningitis and Bacteremia. Case Rep Infect Dis 2020; 2020:5931235. [PMID: 32774949 PMCID: PMC7397378 DOI: 10.1155/2020/5931235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Accepted: 06/17/2020] [Indexed: 11/25/2022] Open
Abstract
Brevibacillus species are environmental organisms that are rarely implicated as human pathogens. We present the case of postsurgical Brevibacillus brevis bacterial meningitis and an associated bacteremia after debulking surgery for a newly diagnosed pilocytic astrocytoma in a 19-year-old woman. The patient experienced clinical cure with a 4-week course of vancomycin, but her postinfectious course was complicated by the development of a pseudomeningocele that required surgical repair. To our knowledge, this is the first described case of a central nervous system infection caused by Brevibacillus brevis in the literature.
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