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Harahap AFP, Conrad J, Wolf M, Pfannstiel J, Klaiber I, Grether J, Hiller E, Vahidinasab M, Salminen H, Treinen C, Perino EHB, Hausmann R. Structure Elucidation and Characterization of Novel Glycolipid Biosurfactant Produced by Rouxiella badensis DSM 100043 T. Molecules 2025; 30:1798. [PMID: 40333752 PMCID: PMC12029617 DOI: 10.3390/molecules30081798] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2025] [Revised: 04/14/2025] [Accepted: 04/14/2025] [Indexed: 05/09/2025] Open
Abstract
Microbial biosurfactants have become increasingly attractive as promising ingredients for environmentally friendly products. The reasons for this are their generally good performance and biodegradability, low toxicity, production from renewable raw materials, and benefits for the environment perceived by consumers. In this study, we investigated the chemical structure and properties of a novel glycolipid from a new biosurfactant-producing strain, Rouxiella badensis DSM 100043T. Bioreactor cultivation was performed at 30 °C and pH 7.0 for 28 h using 15 g/L glycerol as a carbon source. The glycolipid was successfully purified from the ethyl acetate extract of the supernatant using medium pressure liquid chromatography (MPLC). The structure of the glycolipid was determined by one- and two-dimensional (1H and 13C) nuclear magnetic resonance (NMR) and confirmed by liquid chromatography electrospray ionization mass spectrometry (LC-ESI/MS). NMR analysis revealed the hydrophilic moiety as a glucose molecule and the hydrophobic moieties as 3-hydroxy-5-dodecenoic acid and 3-hydroxydecanoic acid, which are linked with the glucose by ester bonds at the C2 and C3 positions. Surface tension measurement with tensiometry indicated that the glucose-lipid could reduce the surface tension of water from 72.05 mN/m to 24.59 mN/m at 25 °C with a very low critical micelle concentration (CMC) of 5.69 mg/L. Moreover, the glucose-lipid demonstrated very good stability in maintaining emulsification activity at pH 2-8, a temperature of up to 100 °C, and a NaCl concentration of up to 15%. These results show that R. badensis DSM 100043T produced a novel glycolipid biosurfactant with excellent surface-active properties, making it promising for further research or industrial applications.
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Affiliation(s)
- Andre Fahriz Perdana Harahap
- Department of Bioprocess Engineering (150k), Institute of Food Science and Biotechnology, University of Hohenheim, Fruwirthstr. 12, 70599 Stuttgart, Germany; (A.F.P.H.); (J.G.); (E.H.); (M.V.); (E.H.B.P.)
| | - Jürgen Conrad
- Department of Organic Chemistry (130b), Institute of Chemistry, University of Hohenheim, Garbenstr. 30, 70599 Stuttgart, Germany; (J.C.); (M.W.)
| | - Mario Wolf
- Department of Organic Chemistry (130b), Institute of Chemistry, University of Hohenheim, Garbenstr. 30, 70599 Stuttgart, Germany; (J.C.); (M.W.)
| | - Jens Pfannstiel
- Mass Spectrometry Unit, Core Facility Hohenheim, University of Hohenheim, Ottilie-Zeller-Weg 2, 70599 Stuttgart, Germany; (J.P.); (I.K.)
| | - Iris Klaiber
- Mass Spectrometry Unit, Core Facility Hohenheim, University of Hohenheim, Ottilie-Zeller-Weg 2, 70599 Stuttgart, Germany; (J.P.); (I.K.)
| | - Jakob Grether
- Department of Bioprocess Engineering (150k), Institute of Food Science and Biotechnology, University of Hohenheim, Fruwirthstr. 12, 70599 Stuttgart, Germany; (A.F.P.H.); (J.G.); (E.H.); (M.V.); (E.H.B.P.)
| | - Eric Hiller
- Department of Bioprocess Engineering (150k), Institute of Food Science and Biotechnology, University of Hohenheim, Fruwirthstr. 12, 70599 Stuttgart, Germany; (A.F.P.H.); (J.G.); (E.H.); (M.V.); (E.H.B.P.)
| | - Maliheh Vahidinasab
- Department of Bioprocess Engineering (150k), Institute of Food Science and Biotechnology, University of Hohenheim, Fruwirthstr. 12, 70599 Stuttgart, Germany; (A.F.P.H.); (J.G.); (E.H.); (M.V.); (E.H.B.P.)
| | - Hanna Salminen
- Department of Food Material Science (150g), Institute of Food Science and Biotechnology, University of Hohenheim, Garbenstr. 21/25, 70599 Stuttgart, Germany;
| | - Chantal Treinen
- Cellular Agriculture, TUM School of Life Sciences, Technical University of Munich, 85354 Freising, Germany;
| | - Elvio Henrique Benatto Perino
- Department of Bioprocess Engineering (150k), Institute of Food Science and Biotechnology, University of Hohenheim, Fruwirthstr. 12, 70599 Stuttgart, Germany; (A.F.P.H.); (J.G.); (E.H.); (M.V.); (E.H.B.P.)
| | - Rudolf Hausmann
- Department of Bioprocess Engineering (150k), Institute of Food Science and Biotechnology, University of Hohenheim, Fruwirthstr. 12, 70599 Stuttgart, Germany; (A.F.P.H.); (J.G.); (E.H.); (M.V.); (E.H.B.P.)
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Song YJ, Zhao NL, Dai DR, Bao R. Prospects of Pseudomonas in Microbial Fuel, Bioremediation, and Sustainability. CHEMSUSCHEM 2025; 18:e202401324. [PMID: 39117578 DOI: 10.1002/cssc.202401324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2024] [Revised: 07/29/2024] [Accepted: 08/08/2024] [Indexed: 08/10/2024]
Abstract
Microbial applications in agriculture and industry have gained significant attention due to their potential to address environmental challenges and promote sustainable development. Among these, the genus Pseudomonas stands out as a promising candidate for various biotechnological uses, thanks to its metabolic flexibility, resilience, and adaptability to diverse environments. This review provides a comprehensive overview of the current state and future prospects of microbial fuel production, bioremediation, and sustainable development, focusing on the pivotal role of Pseudomonas species. We emphasize the importance of microbial fuel as a renewable energy source and discuss recent advancements in enhancing biofuel generation using Pseudomonas strains. Additionally, we explore the critical role of Pseudomonas in bioremediation processes, highlighting its ability to degrade a wide spectrum of pollutants, including hydrocarbons, pesticides, and heavy metals, thereby reducing environmental contamination. Despite significant progress, several challenges remain. These include refining microbial strains for optimal process efficiency and addressing ecological considerations. Nonetheless, the diverse capabilities of Pseudomonas offer promising avenues for innovative solutions to pressing environmental issues, supporting the transition to a more sustainable future.
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Affiliation(s)
- Ying-Jie Song
- College of Life Science, Sichuan Normal University, Chengdu, 610101, China
| | - Ning-Lin Zhao
- Center of Infectious Diseases, Division of Infectious Diseases in State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, 610041, China
| | - De-Rong Dai
- Center of Infectious Diseases, Division of Infectious Diseases in State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, 610041, China
| | - Rui Bao
- Center of Infectious Diseases, Division of Infectious Diseases in State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, 610041, China
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Kang D, Lin H, Li Q, Su N, Cheng C, Luo Y, Zhang Z, Zhang Z. Enhanced Oil Recovery in a Co-Culture System of Pseudomonas aeruginosa and Bacillus subtilis. Microorganisms 2024; 12:2343. [PMID: 39597732 PMCID: PMC11596543 DOI: 10.3390/microorganisms12112343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2024] [Revised: 11/11/2024] [Accepted: 11/14/2024] [Indexed: 11/29/2024] Open
Abstract
Microbial enhanced oil recovery (MEOR) is a promising technology for oil field extraction. This study investigated a co-culture system of Pseudomonas aeruginosa and Bacillus subtilis to increase MEOR efficacy. We analyzed bacterial growth, biosurfactant production, and crude oil emulsified performance under different inoculation ratios. Compared to single cultures, the co-culture system showed superior growth and functional expression, with an optimal inoculation ratio of 1:1. Quantitative assessments of the cell numbers and biosurfactant production during the co-culture revealed that rapid B. subtilis proliferation in early stages significantly stimulated P. aeruginosa growth. This interaction increased cell density and rhamnolipid production by 208.05% and 216.25%, respectively. The microscopic etching model displacement results demonstrated enhanced emulsification and mobilization of crude oil by the co-culture system, resulting in 94.48% recovery. A successful field application in a block-scale reservoir increased cumulative oil production by 3.25 × 103 t. An analysis of microbial community structure and function in different phases revealed that after co-culture system injection, Pseudomonas became the dominant genus in the reservoir community, with an average abundance of 24.80%. Additionally, the abundance of biosurfactant-producing and hydrocarbon-degrading bacteria increased significantly. This research and the application of the P. aeruginosa and B. subtilis co-culture system provide novel insights and strategies for MEOR.
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Affiliation(s)
- Dingyu Kang
- State Key Laboratory of Heavy Oil Processing, China University of Petroleum, Beijing 102249, China; (D.K.); (H.L.); (Y.L.); (Z.Z.)
| | - Hai Lin
- State Key Laboratory of Heavy Oil Processing, China University of Petroleum, Beijing 102249, China; (D.K.); (H.L.); (Y.L.); (Z.Z.)
- Drilling and Production Technology Research Institute of CNPC Qinghai Oilfield, Dunhuang 736202, China; (Q.L.); (N.S.); (C.C.)
| | - Qiang Li
- Drilling and Production Technology Research Institute of CNPC Qinghai Oilfield, Dunhuang 736202, China; (Q.L.); (N.S.); (C.C.)
| | - Nan Su
- Drilling and Production Technology Research Institute of CNPC Qinghai Oilfield, Dunhuang 736202, China; (Q.L.); (N.S.); (C.C.)
| | - Changkun Cheng
- Drilling and Production Technology Research Institute of CNPC Qinghai Oilfield, Dunhuang 736202, China; (Q.L.); (N.S.); (C.C.)
| | - Yijing Luo
- State Key Laboratory of Heavy Oil Processing, China University of Petroleum, Beijing 102249, China; (D.K.); (H.L.); (Y.L.); (Z.Z.)
| | - Zhongzhi Zhang
- State Key Laboratory of Heavy Oil Processing, China University of Petroleum, Beijing 102249, China; (D.K.); (H.L.); (Y.L.); (Z.Z.)
| | - Zhiyong Zhang
- State Key Laboratory of Heavy Oil Processing, China University of Petroleum, Beijing 102249, China; (D.K.); (H.L.); (Y.L.); (Z.Z.)
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Aqif M, Shah MUH, Khan R, Umar M, SajjadHaider, Razak SIA, Wahit MU, Khan SUD, Sivapragasam M, Ullah S, Nawaz R. Glycolipids biosurfactants production using low-cost substrates for environmental remediation: progress, challenges, and future prospects. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:47475-47504. [PMID: 39017873 DOI: 10.1007/s11356-024-34248-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Accepted: 07/02/2024] [Indexed: 07/18/2024]
Abstract
The production of renewable materials from alternative sources is becoming increasingly important to reduce the detrimental environmental effects of their non-renewable counterparts and natural resources, while making them more economical and sustainable. Chemical surfactants, which are highly toxic and non-biodegradable, are used in a wide range of industrial and environmental applications harming humans, animals, plants, and other entities. Chemical surfactants can be substituted with biosurfactants (BS), which are produced by microorganisms like bacteria, fungi, and yeast. They have excellent emulsifying, foaming, and dispersing properties, as well as excellent biodegradability, lower toxicity, and the ability to remain stable under severe conditions, making them useful for a variety of industrial and environmental applications. Despite these advantages, BS derived from conventional resources and precursors (such as edible oils and carbohydrates) are expensive, limiting large-scale production of BS. In addition, the use of unconventional substrates such as agro-industrial wastes lowers the BS productivity and drives up production costs. However, overcoming the barriers to commercial-scale production is critical to the widespread adoption of these products. Overcoming these challenges would not only promote the use of environmentally friendly surfactants but also contribute to sustainable waste management and reduce dependence on non-renewable resources. This study explores the efficient use of wastes and other low-cost substrates to produce glycolipids BS, identifies efficient substrates for commercial production, and recommends strategies to improve productivity and use BS in environmental remediation.
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Affiliation(s)
- Muhammad Aqif
- Faculty of Materials and Chemical Engineering, Department of Chemical Engineering, Ghulam Ishaq Khan Institute, Topi, Swabi, Khyber Pakhtunkhwa, 23460, Pakistan
- Chemical Engineering Department, College of Engineering, King Saud University, P.O. Box 800, 11421, Riyadh, Saudi Arabia
| | - Mansoor Ul Hassan Shah
- Department of Chemical Engineering, Faculty of Mechanical, Chemical and Industrial Engineering, University of Engineering and Technology, Peshawar, 25120, Pakistan
| | - Rawaiz Khan
- College of Dentistry, Engineer Abdullah Bugshan Research Chair for Dental and Oral Rehabilitation, King Saud University, 11545, Riyadh, Saudi Arabia.
| | - Muhammad Umar
- Faculty of Materials and Chemical Engineering, Department of Chemical Engineering, Ghulam Ishaq Khan Institute, Topi, Swabi, Khyber Pakhtunkhwa, 23460, Pakistan
| | - SajjadHaider
- Chemical Engineering Department, College of Engineering, King Saud University, P.O. Box 800, 11421, Riyadh, Saudi Arabia
| | - Saiful Izwan Abd Razak
- BioInspired Device and Tissue Engineering Research Group, School of Biomedical Engineering and Health Sciences, Faculty of Engineering, Universiti Teknologi Malaysia, Skudai, Johor, Malaysia
- Sports Innovation & Technology Centre, Institute of Human Centred Engineering, Universiti Teknologi Malaysia, 81300, Skudai, Johor, Malaysia
| | - Mat Uzir Wahit
- Faculty of Chemical and Energy Engineering, UniversitiTeknologi Malaysia (UTM), 81310, Skudai, Johor Bahru, Johor, Malaysia
- Centre for Advanced Composite Materials (CACM), Universiti Teknologi Malaysia (UTM), 81310, Skudai, Johor, Malaysia
| | - Salah Ud-Din Khan
- College of Engineering, Sustainable Energy Center Technologies, King Saud University, P.O. Box 800, 11421, Riyadh, Saudi Arabia
| | - Magaret Sivapragasam
- Faculty of Integrated Life Sciences, School of Integrated Sciences (SIS), School of Postgraduate Studies, Research and Internationalization, Quest International University, 30250, Ipoh, Perak, Malaysia
| | - Shafi Ullah
- Institute of Soil and Environmental Sciences, PirMehr Ali Shah Arid Agriculture University Shamsabad, Murree Rd, Rawalpindi, 46300, Pakistan
| | - Rab Nawaz
- Institute of Soil and Environmental Sciences, PirMehr Ali Shah Arid Agriculture University Shamsabad, Murree Rd, Rawalpindi, 46300, Pakistan
- Department of Earth Sciences and Environment, Faculty of Science and Technology, Universiti Kebangsaan Malaysia (UKM), 43600, Bangi, Selangor, Malaysia
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Li C, Wang Y, Zhou L, Cui Q, Sun W, Yang J, Su H, Zhao F. High mono-rhamnolipids production by a novel isolate Pseudomonas aeruginosa LP20 from oily sludge: characterization, optimization, and potential application. Lett Appl Microbiol 2024; 77:ovae016. [PMID: 38366661 DOI: 10.1093/lambio/ovae016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 01/18/2024] [Accepted: 02/14/2024] [Indexed: 02/18/2024]
Abstract
This study aims to isolate microbial strains for producing mono-rhamnolipids with high proportion. Oily sludge is rich in petroleum and contains diverse biosurfactant-producing strains. A biosurfactant-producing strain LP20 was isolated from oily sludge, identified as Pseudomonas aeruginosa based on phylogenetic analysis of 16S rRNA. High-performance liquid chromatography-mass spectrometry results indicated that biosurfactants produced from LP20 were rhamnolipids, mainly containing Rha-C8-C10, Rha-C10-C10, Rha-Rha-C8-C10, Rha-Rha-C10-C10, Rha-C10-C12:1, and Rha-C10-C12. Interestingly, more mono-rhamnolipids were produced by strain LP20 with a relative abundance of 64.5%. Pseudomonas aeruginosa LP20 optimally produced rhamnolipids at a pH of 7.0 and a salinity of 0.1% using glycerol and nitrate. The culture medium for rhamnolipids by strain LP20 was optimized by response surface methodology. LP20 produced rhamnolipids up to 6.9 g L-1, increased by 116%. Rhamnolipids produced from LP20 decreased the water surface tension to 28.1 mN m-1 with a critical micelle concentration of 60 mg L-1. The produced rhamnolipids emulsified many hydrocarbons with EI24 values higher than 56% and showed antimicrobial activity against Staphylococcus aureus and Cladosporium sp. with inhibition rates 48.5% and 17.9%, respectively. Pseudomonas aeruginosa LP20 produced more proportion of mono-rhamnolipids, and the LP20 rhamnolipids exhibited favorable activities and promising potential in microbial-enhanced oil recovery, bioremediation, and agricultural biocontrol.
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Affiliation(s)
- Chunyan Li
- School of Life Sciences, Qufu Normal University, Qufu, Shandong Province, 273165, China
| | - Yujing Wang
- School of Life Sciences, Qufu Normal University, Qufu, Shandong Province, 273165, China
| | - Liguo Zhou
- School of Life Sciences, Qufu Normal University, Qufu, Shandong Province, 273165, China
| | - Qingfeng Cui
- Research Center of Enhanced Oil Recovery, PetroChina Research Institute of Petroleum Exploration & Development, Beijing 100083, China
| | - Wenzhe Sun
- School of Life Sciences, Qufu Normal University, Qufu, Shandong Province, 273165, China
| | - Junyuan Yang
- School of Life Sciences, Qufu Normal University, Qufu, Shandong Province, 273165, China
| | - Han Su
- School of Life Sciences, Qufu Normal University, Qufu, Shandong Province, 273165, China
| | - Feng Zhao
- School of Life Sciences, Qufu Normal University, Qufu, Shandong Province, 273165, China
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Chauhan M, Kimothi A, Sharma A, Pandey A. Cold adapted Pseudomonas: ecology to biotechnology. Front Microbiol 2023; 14:1218708. [PMID: 37529326 PMCID: PMC10388556 DOI: 10.3389/fmicb.2023.1218708] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Accepted: 06/26/2023] [Indexed: 08/03/2023] Open
Abstract
The cold adapted microorganisms, psychrophiles/psychrotolerants, go through several modifications at cellular and biochemical levels to alleviate the influence of low temperature stress conditions. The low temperature environments depend on these cold adapted microorganisms for various ecological processes. The ability of the microorganisms to function in cold environments depends on the strategies directly associated with cell metabolism, physicochemical constrains, and stress factors. Pseudomonas is one among such group of microorganisms which is predominant in cold environments with a wide range of ecological and biotechnological applications. Bioformulations of Pseudomonas spp., possessing plant growth promotion and biocontrol abilities for application under low temperature environments, are well documented. Further, recent advances in high throughput sequencing provide essential information regarding the prevalence of Pseudomonas in rhizospheres and their role in plant health. Cold adapted species of Pseudomonas are also getting recognition for their potential in biodegradation and bioremediation of environmental contaminants. Production of enzymes and bioactive compounds (primarily as an adaptation mechanism) gives way to their applications in various industries. Exopolysaccharides and various biotechnologically important enzymes, produced by cold adapted species of Pseudomonas, are making their way in food, textiles, and pharmaceuticals. The present review, therefore, aims to summarize the functional versatility of Pseudomonas with particular reference to its peculiarities along with the ecological and biotechnological applications.
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Affiliation(s)
- Mansi Chauhan
- Department of Microbiology, Graphic Era (Deemed to be University), Dehradun, Uttarakhand, India
| | - Ayushi Kimothi
- Department of Microbiology, Graphic Era (Deemed to be University), Dehradun, Uttarakhand, India
| | - Avinash Sharma
- National Centre for Cell Science, Pune, Maharashtra, India
| | - Anita Pandey
- Department of Biotechnology, Graphic Era (Deemed to be University), Dehradun, Uttarakhand, India
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