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Rizzo C, Caruso G, Maimone G, Patrolecco L, Termine M, Bertolino M, Giannarelli S, Rappazzo AC, Elster J, Lena A, Papale M, Pescatore T, Rauseo J, Soldano R, Spataro F, Aspholm PE, Azzaro M, Lo Giudice A. Microbiome and pollutants in the freshwater sponges Ephydatia muelleri (Lieberkühn, 1856) and Spongilla lacustris (Linnaeus, 1758) from the sub-Arctic Pasvik river (Northern Fennoscandia). ENVIRONMENTAL RESEARCH 2025; 273:121126. [PMID: 39978622 DOI: 10.1016/j.envres.2025.121126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2024] [Revised: 01/16/2025] [Accepted: 02/12/2025] [Indexed: 02/22/2025]
Abstract
Despite the ecosystem functions offered by sponges in freshwater habitats, fragmentary studies have targeted their microbiome and the bioaccumulation of legacy and emerging organic micropollutants, making it difficult to test hypotheses about sponge-microbe specificity and response to environmental factors and stressors. The sponge species Ephydatia muelleri and Spongilla lacustris, coexisting in two sites of the Pasvik River (northern Fennoscandia), were analyzed for persistent organic pollutant (POPs) and chemicals of emerging concern (CECs), along with quali-quantitative microbiological features. River water and sediment were similarly treated to establish if the obtained data were site- or sponge-specific. CECs mainly occurred in abiotic matrices, with trimethoprim and ciprofloxacin prevailing in water and sediment, respectively. Only ciprofloxacin and diclofenac were detected in sponges, with higher concentrations generally determined in S. lacustris than E. muelleri. Overall, POP concentrations were in the order polycyclic aromatic hydrocarbons > chlorobenzenes > polychlorobiphenyls > polychloronaphthalenes, with higher values in sponges with respect to abiotic matrices. Generally, POPs occurred at higher concentrations in S. lacustris than E. muelleri. Enzyme activity measurements displayed diverse trends across samples and sites, with E. muelleri displaying higher glycolytic activity than S. lacustris. Prokaryotic abundance in sponges generally exceeded that found in abiotic matrices. Proteobacteria, Planctomycetota, Actinobacteriota, Verrucomicrobiota, and Cyanobacteria predominated in sponge samples, with slight differences between sponge species and sampling sites, whereas Desulfobacterota and Acidobacterota were retrieved mostly in sediment samples. The sponge-associated bacterial communities appeared to be differently affected by pollutant concentration at the site level. Overall, this study highlights the ecological role of freshwater sponges, shedding light on their microbial associations, pollutant bioaccumulation, and potential as bioindicators of aquatic ecosystem health. The findings emphasize the importance of considering both microbial diversity and contaminant accumulation for a holistic understanding of the roles played by freshwater sponges in human-impacted environments.
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Affiliation(s)
- Carmen Rizzo
- Stazione Zoologica Anton Dohrn, Sicily Marine Centre, Department Ecosustainable Marine Biotechnology, Villa Pace, Contrada Porticatello 29, 98167, Messina, Italy; Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy
| | - Gabriella Caruso
- Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy
| | - Giovanna Maimone
- Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy
| | - Luisa Patrolecco
- Institute of Polar Sciences, National Research Council, CNR Area della Ricerca di Roma 1, Via Salaria km 29, Montelibretti (RM), 300 00015, Italy; National Biodiversity Future Center (NCBF), Piazza Marina 61, 90133, Palermo, Italy
| | - Marco Termine
- Dept. Chemistry and Industrial Chemistry, University of Pisa, Via Giuseppe Moruzzi, 13, 56124, Pisa, Italy
| | - Marco Bertolino
- Department of the Earth, Environment and Life Science (DiSTAV), University of Genoa, Corso Europa 26, 16132, Genoa, Italy
| | - Stefania Giannarelli
- Dept. Chemistry and Industrial Chemistry, University of Pisa, Via Giuseppe Moruzzi, 13, 56124, Pisa, Italy
| | - Alessandro Ciro Rappazzo
- Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy; Cà Foscari University of Venice, Dorsoduro 3246, 30123, Venezia, Italy
| | - Josef Elster
- Institute of Botany, Czech Academy of Science, Třeboň, Czech Republic; Centre for Polar Ecology, Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic
| | - Alessio Lena
- Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy; University of Messina, Department ChiBioFarAm, V.le Ferdinando Stagno d'Alcontres 31, 98166, Messina, Italy
| | - Maria Papale
- Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy
| | - Tanita Pescatore
- Institute of Polar Sciences, National Research Council, CNR Area della Ricerca di Roma 1, Via Salaria km 29, Montelibretti (RM), 300 00015, Italy
| | - Jasmin Rauseo
- Institute of Polar Sciences, National Research Council, CNR Area della Ricerca di Roma 1, Via Salaria km 29, Montelibretti (RM), 300 00015, Italy; National Biodiversity Future Center (NCBF), Piazza Marina 61, 90133, Palermo, Italy
| | - Rosamaria Soldano
- Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy; University of Messina, Department ChiBioFarAm, V.le Ferdinando Stagno d'Alcontres 31, 98166, Messina, Italy
| | - Francesca Spataro
- Institute of Polar Sciences, National Research Council, CNR Area della Ricerca di Roma 1, Via Salaria km 29, Montelibretti (RM), 300 00015, Italy; National Biodiversity Future Center (NCBF), Piazza Marina 61, 90133, Palermo, Italy
| | - Paul Eric Aspholm
- Norwegian Institute of Bioeconomy Research (NIBIO) Svanhovd 23, 9925, Norway
| | - Maurizio Azzaro
- Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy
| | - Angelina Lo Giudice
- Institute of Polar Sciences, National Research Council, Spianata S. Raineri 86, 98122, Messina, Italy; National Biodiversity Future Center (NCBF), Piazza Marina 61, 90133, Palermo, Italy.
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Li S, Xie P, Chang H, Ho SH. Simultaneously enhancement in the assimilation of microalgal nitrogen and the accumulation of carbohydrate by Debaryomyces hansenii. CHEMOSPHERE 2023:139183. [PMID: 37302499 DOI: 10.1016/j.chemosphere.2023.139183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 06/01/2023] [Accepted: 06/08/2023] [Indexed: 06/13/2023]
Abstract
Microalgae-based techniques are considered an alternative to traditional activated sludge processes for removing nitrogen from wastewater. Bacteria consortia have been broadly conducted as one of the most important partners. However, fungal effects on the removal of nutrients and changes in physiological properties of microalgae, and their impact mechanisms remain unclear. The current work demonstrates that, adding fungi increased the nitrogen assimilation of microalgae and the generation of carbohydrates compared to pure microalgal cultivation. The NH4+-N removal efficiency was 95.0% within 48 h using the microalgae-fungi system. At 48 h, total sugars (glucose, xylose, and arabinose) accounted for 24.2 ± 4.2% per dry weight in the microalgae-fungi group. Gene ontology (GO) enrichment analysis revealed that, among various processes, phosphorylation and carbohydrate metabolic processes were more prominent. Gene encoding the key enzymes of glycolysis, pyruvate kinase, and phosphofructokinase were significantly up-regulated. Overall, for the first time, this study provides new insights into the art of microalgae-fungi consortia for producing value-added metabolites.
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Affiliation(s)
- Shengnan Li
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China
| | - Peng Xie
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China
| | - Haixing Chang
- College of Chemistry and Chemical Engineering, Chongqing University of Technology, Chongqing, 400054, China
| | - Shih-Hsin Ho
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China.
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Zhang C, Li M, Sun J, Huang J, Chang S. Fluorescein diacetate hydrolytic activity as a sensitive tool to quantify nitrogen/sulfur gene content in urban river sediments in China. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:62544-62552. [PMID: 36943562 DOI: 10.1007/s11356-023-26543-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Accepted: 03/15/2023] [Indexed: 05/10/2023]
Abstract
The relative abundance of functional genes used to quantify the abundance of functional genes in communities is controversial. Quantitative PCR (qPCR) technology offers a powerful tool for quantifying functional gene abundance. However, humic substances can inhibit qPCR in sediment/soil samples. Therefore, finding a convenient and effective quantitative analysis method for sediment/soil samples is necessary. The functional genes and physicochemical properties in sediments with different-level pollutions were analyzed in this study. Correlations between physicochemical properties and the relative abundance of functional genes were used to test whether relative abundance in gene prediction quantifies the abundance of functional genes. The abundance of functional genes could be corrected by multiplying the fluorescein diacetate (FDA) hydrolytic rates by the relative abundance of functional genes since the FDA assay has been widely used as a rapid and sensitive method for quantifying microbial activity in sediments. Redundancy analysis showed significant interrelations between the functional genes and the physicochemical properties of sediments. The relative abundance of functional genes is unreliable for quantifying the abundance of functional genes because of the weak correlation (R < 0.5, P < 0.05) between different pollutants and the relative abundance of functional genes. However, a significant positive correlation between concentrations of different pollutants and the activities of associated enzymes was obtained (R > 0.933, P < 0.05), which revealed that the abundance of functional genes could be reliably quantified by the relative abundance and FDA hydrolytic rate. This study proposed an alternative method besides qPCR to quantify the absolute abundance of functional genes, which overcomes the problem of humic interference in the quantitative analysis of sediment/soil samples.
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Affiliation(s)
- Chao Zhang
- School of Environmental Science and Engineering, Tianjin University, Tianjin, 300350, People's Republic of China
- Tianjin Academy of Eco-Environmental Sciences, Nankai, Tianjin, 300191, China
| | - Meng Li
- School of Environmental Science and Engineering, Tianjin University, Tianjin, 300350, People's Republic of China
- North China Municipal Engineering Design & Research Institute Co, LTD., Tianjin, 300074, China
| | - Jingmei Sun
- School of Environmental Science and Engineering, Tianjin University, Tianjin, 300350, People's Republic of China.
| | - Jianjun Huang
- School of Environmental Science and Engineering, Tianjin University, Tianjin, 300350, People's Republic of China
| | - Suyun Chang
- School of Environmental Science and Engineering, Tianjin University, Tianjin, 300350, People's Republic of China
- Tianjin Hydraulic Research Institute, Tianjin, 300061, People's Republic of China
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Xu L, Huang F, Wu F, Fan R. Grade evaluation of black-odorous urban rivers in the Greater Bay Area of China using an improved back propagation (BP) neural network. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:55171-55186. [PMID: 36882653 DOI: 10.1007/s11356-023-26202-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Accepted: 02/25/2023] [Indexed: 06/18/2023]
Abstract
With the rapid development of urbanization, the urban water environment is receiving continuous attention. It is necessary to understand water quality in a timely manner and make a reasonable comprehensive evaluation. However, existing black-odorous water grade evaluation guidelines are not sufficient. Understanding the changing situation of black-odorous water in urban rivers is a growing concern, especially in real-world scenarios. In this study, a BP neural network combined with the fuzzy membership degree was applied to evaluate the black-odorous grade of urban rivers in Foshan City, which is within the Greater Bay Area of China. The optimal 4 × 11 × 1 topology structure of the BP model was constructed by taking the dissolved oxygen (DO), ammonia nitrogen (NH3-N), chemical oxygen demand (COD), and total phosphorus (TP) concentrations as input water quality indicators. There was almost no occurrence of black-odorous water in the two public rivers outside the region in 2021. Black-odorous water was most significant in 10 urban rivers, with grade IV and grade V occurring over 50% of the time in 2021. These rivers had three features, i.e., parallel with a public river, beheaded, and close proximity to Guangzhou City, the provincial capital of Guangdong. The results of the grade evaluation of the black-odorous water found basically matched those of the water quality assessment. The existence of some inconsistencies between the two systems justified the necessity to expand and extend the number of employed indicators and grades in the present guidelines. The results confirm the capability of the BP neural network combined with the fuzzy-based membership degree in the quantitative grade evaluation of black-odorous water in urban rivers. This study makes a step forward in understanding the grading of black-odorous urban rivers. The findings can provide a reference for local policy-makers regarding the priority of practical engineering projects in prevailing water environment treatment programs.
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Affiliation(s)
- Liping Xu
- POWERCHINA Chengdu Engineering Corporation Limited, Chengdu, 611130, China.
- Sichuan Municipal Water Environment Treatment Engineering Technology Research Center, Chengdu, 611130, China.
| | - Faming Huang
- POWERCHINA Chengdu Engineering Corporation Limited, Chengdu, 611130, China
- Sichuan Municipal Water Environment Treatment Engineering Technology Research Center, Chengdu, 611130, China
| | - Fuhua Wu
- POWERCHINA Chengdu Engineering Corporation Limited, Chengdu, 611130, China
- Sichuan Municipal Water Environment Treatment Engineering Technology Research Center, Chengdu, 611130, China
| | - Ruiqi Fan
- POWERCHINA Chengdu Engineering Corporation Limited, Chengdu, 611130, China
- Sichuan Municipal Water Environment Treatment Engineering Technology Research Center, Chengdu, 611130, China
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