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Wang X, Li W, Yang S, He Z, Li Y, Wang Y, Li J. Iron-dependent autotrophic denitrification as a novel microbial driven and iron-mediated denitrification process: A critical review. ENVIRONMENTAL RESEARCH 2025; 273:120808. [PMID: 39920964 DOI: 10.1016/j.envres.2025.120808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2024] [Revised: 12/30/2024] [Accepted: 01/08/2025] [Indexed: 02/10/2025]
Abstract
Based on previous research results, iron-dependent autotrophic denitrification (IDAD) was evaluated in an all-around way to provide a theoretical basis for further research. First, this review systematically and comprehensively summarizes the development of IDAD technology and describes the physiological properties of relevant functional microorganisms and their potential mechanisms from different perspectives. Second, the possible Fe-N pathways involved in the reaction of different iron-based materials are discussed in detail. Then, the theoretical advantages of the IDAD process and potential problems are described, and the corresponding control strategies are summarized. The influence of key factors on denitrification is discussed in terms of operational and water quality parameters. In addition, the application and research direction of this technology in engineering are summarized. Finally, the latest development trends and prospects for future applications are discussed to promote an in-depth understanding of IDAD and its practical application in sewage treatment.
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Affiliation(s)
- Xuechao Wang
- College of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, PR China
| | - Wenxuan Li
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, PR China; State Environmental Protection Key Laboratory of Ecological Effect and Risk Assessment of Chemicals, Chinese Research Academy of Environmental Sciences, Beijing, 100012, PR China.
| | - Shirong Yang
- College of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, PR China
| | - Zihan He
- College of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, PR China
| | - Yanyu Li
- College of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, PR China
| | - Yae Wang
- College of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, PR China
| | - Jie Li
- College of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, PR China
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Cui J, Yang Q, Zhang J, Ju C, Cui S. Mitochondrial Genome Insights into Evolution and Gene Regulation in Phragmites australis. Int J Mol Sci 2025; 26:546. [PMID: 39859262 PMCID: PMC11764873 DOI: 10.3390/ijms26020546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2024] [Revised: 12/28/2024] [Accepted: 12/28/2024] [Indexed: 01/27/2025] Open
Abstract
As a globally distributed perennial Gramineae, Phragmites australis can adapt to harsh ecological environments and has significant economic and environmental values. Here, we performed a complete assembly and annotation of the mitogenome of P. australis using genomic data from the PacBio and BGI platforms. The P. australis mitogenome is a multibranched structure of 501,134 bp, divided into two circular chromosomes of 325,493 bp and 175,641 bp, respectively. A sequence-simplified succinate dehydrogenase 4 gene was identified in this mitogenome, which is often translocated to the nuclear genome in the mitogenomes of gramineous species. We also identified tissue-specific mitochondrial differentially expressed genes using RNAseq data, providing new insights into understanding energy allocation and gene regulatory strategies in the long-term adaptive evolution of P. australis mitochondria. In addition, we studied the mitogenome features of P. australis in more detail, including repetitive sequences, gene Ka/Ks analyses, codon preferences, intracellular gene transfer, RNA editing, and multispecies phylogenetic analyses. Our results provide an essential molecular resource for understanding the genetic characterisation of the mitogenome of P. australis and provide a research basis for population genetics and species evolution in Arundiaceae.
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Affiliation(s)
- Jipeng Cui
- College of Life Sciences, Capital Normal University, Haidian District, Beijing 100048, China; (J.C.); (Q.Y.); (J.Z.); (C.J.)
- Beijing Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing 100048, China
| | - Qianhui Yang
- College of Life Sciences, Capital Normal University, Haidian District, Beijing 100048, China; (J.C.); (Q.Y.); (J.Z.); (C.J.)
| | - Jiyue Zhang
- College of Life Sciences, Capital Normal University, Haidian District, Beijing 100048, China; (J.C.); (Q.Y.); (J.Z.); (C.J.)
| | - Chuanli Ju
- College of Life Sciences, Capital Normal University, Haidian District, Beijing 100048, China; (J.C.); (Q.Y.); (J.Z.); (C.J.)
- Beijing Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing 100048, China
| | - Suxia Cui
- College of Life Sciences, Capital Normal University, Haidian District, Beijing 100048, China; (J.C.); (Q.Y.); (J.Z.); (C.J.)
- Beijing Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, Beijing 100048, China
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Wu Z, Zhao T, Zhang Y, Wang Y, Chen P, Lu G, Huang S, Qiu G. Iron-enhanced microscale laboratory aerated filters in the treatment of artificial mariculture wastewater: A study on nitrogen removal performance and the impact on microbial community structure. CHEMOSPHERE 2024; 357:141854. [PMID: 38556181 DOI: 10.1016/j.chemosphere.2024.141854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2024] [Revised: 03/11/2024] [Accepted: 03/28/2024] [Indexed: 04/02/2024]
Abstract
This study investigates the nitrogen removal efficacy and microbial community dynamics in seawater aquaculture effluent treatment using three different substrate combinations of microscale laboratory aerated filters (MFs) - MF1 (LECA), MF2 (LECA/Fe-C), and MF3 (LECA/Pyrite). The findings indicated that the COD removal exceeded 95% across all MFs, with higher removal efficiencies in MF2 and MF3. In terms of nitrogen removal performance, MF2 exhibited the highest average nitrogen removal of 93.17%, achieving a 12.35% and 3.56% increase compared to MF1 (80.82%) and MF3 (89.61%), respectively. High-throughput sequencing analysis revealed that the Fe-C substrate significantly enhanced the diversity of the microbial community. Notably, in MF2, the salinophilic denitrifying bacterium Halomonas was significantly enriched, accounting for 42.6% of the total microbial community, which was beneficial for nitrogen removal. Moreover, an in-depth analysis of nitrogen metabolic pathways and microbial enzymes indicated that MF2 and MF3 possessed a high abundance of nitrification and denitrification enzymes, related to the high removal rates of NH4+-N and NO3--N. Therefore, the combination of LECA with iron-based materials significantly enhances the nitrogen removal efficiency from mariculture wastewater.
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Affiliation(s)
- Zhipeng Wu
- School of Environment and Energy, South China University of Technology, Higher Education Mega Center, Guangzhou, 510006, China.
| | - Tianyu Zhao
- School of Environment and Energy, South China University of Technology, Higher Education Mega Center, Guangzhou, 510006, China.
| | - Yu Zhang
- School of Environment and Energy, South China University of Technology, Higher Education Mega Center, Guangzhou, 510006, China.
| | - Yanling Wang
- School of Environment and Energy, South China University of Technology, Higher Education Mega Center, Guangzhou, 510006, China.
| | - Pengfei Chen
- School of Environment and Energy, South China University of Technology, Higher Education Mega Center, Guangzhou, 510006, China.
| | - Guining Lu
- School of Environment and Energy, South China University of Technology, Higher Education Mega Center, Guangzhou, 510006, China.
| | - Shaobin Huang
- School of Environment and Energy, South China University of Technology, Higher Education Mega Center, Guangzhou, 510006, China.
| | - Guanglei Qiu
- School of Environment and Energy, South China University of Technology, Higher Education Mega Center, Guangzhou, 510006, China.
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Peng Y, Gu X, Zhang M, Yan P, Sun S, He S. Simultaneously enhanced autotrophic-heterotrophic denitrification in iron-based ecological floating bed by plant biomass: Metagenomics insights into microbial communities, functional genes and nitrogen metabolic pathways. WATER RESEARCH 2024; 248:120868. [PMID: 37979568 DOI: 10.1016/j.watres.2023.120868] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 10/27/2023] [Accepted: 11/12/2023] [Indexed: 11/20/2023]
Abstract
In this study, the ecological floating bed supporting with zero-valent iron (ZVI) and plant biomass (EFB-IB) was constructed to improve nitrogen removal from low-polluted water. The effects of ZVI coupling with plant biomass on microbial community structure, metabolic pathways and functional genes were analyzed by metagenomic sequencing, and the mechanism for nitrogen removal was revealed. Results showed that compared with mono-ZVI system (EFB-C), the denitrification efficiencies of EFB-IB were effectively enhanced, with the higher average NO3--N removal efficiencies of 22.60-59.19%. Simultaneously, the average NH4+-N removal efficiencies were 73.08-91.10%. Metagenomic analyses showed that EFB-IB enriched microbes that involved in iron cycle, lignocellulosic degradation and nitrogen metabolism. Plant biomass addition simultaneously increased the relative abundances of autotrophic and heterotrophic denitrifying bacteria. Network analysis showed the cooperation between autotrophic and heterotrophic denitrifying bacteria in EFB-IB. Moreover, compared with EFB-C, plant biomass addition increased the relative abundances of genes related to iron cycle, lignocellulose degradation and glycolysis processes, ensuring the production of autotrophic and heterotrophic electron donors. Therefore, the relative abundances of key enzymes and functional genes related to denitrification were higher in EFB-IB, being beneficial to the NO3--N removal. Additionally, the correlation analysis of nitrogen removal and functional genes verified the synergistic mechanism of iron-based autotrophic denitrification and plant biomass-mediated heterotrophic denitrification in EFB-IB. In summary, plant biomass has excellent potential to improve the nitrogen removal of iron-based EFB from low-polluted water.
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Affiliation(s)
- Yuanyuan Peng
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Xushun Gu
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Manping Zhang
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Pan Yan
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Shanshan Sun
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Shengbing He
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China.
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Yuan Q, Gao J, Liu P, Huang Z, Li L. Autotrophic denitrification based on sulfur-iron minerals: advanced wastewater treatment technology with simultaneous nitrogen and phosphorus removal. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:6766-6781. [PMID: 38159185 DOI: 10.1007/s11356-023-31467-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Accepted: 12/06/2023] [Indexed: 01/03/2024]
Abstract
Autotrophic denitrification technology has many advantages, including no external carbon source addition, low sludge production, high operating cost efficiency, prevention of secondary sewage pollution, and stable treatment efficiency. At present, the main research on autotrophic denitrification electron donors mainly includes sulfur, iron, and hydrogen. In these autotrophic denitrification systems, pyrite has received attention due to its advantages of easy availability of raw materials, low cost, and pH stability. When pyrite is used as a substrate for autotropic denitrification, sulfide (S2-) and ferrous ion (Fe2+) in the substrate will provide electrons to convert nitrate (NO3-) in sewage first to nitrite (NO2-), then to nitrogen (N2), and finally to discharge the system. At the same time, sulfide (S2-) loses electrons to sulfate (SO42-) and ferrous ion (Fe2+) loses electrons to ferric iron (Fe3+). Phosphates (PO43-) in wastewater are chemically combined with ferric iron (Fe3+) to form ferric phosphate (FePO4) precipitate. This paper aims to provide a detailed and comprehensive overview of the dynamic changes of nitrogen (N), phosphorus (P), and other substances in the process of sulfur autotrophic denitrification using iron sulfide, and to summarize the factors that affect wastewater treatment in the system. This work will provide a relevant research direction and theoretical basis for the field of sulfur autotrophic denitrification, especially for the related experiments of the reaction conversion of various substances in the system.
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Affiliation(s)
- Quan Yuan
- School of Ecology and Environment, Zhengzhou University, Zhengzhou, 450001, China
| | - Jingqing Gao
- School of Ecology and Environment, Zhengzhou University, Zhengzhou, 450001, China.
| | - Panpan Liu
- School of Ecology and Environment, Zhengzhou University, Zhengzhou, 450001, China
| | - Zhenzhen Huang
- Faculty of Environmental and Municipal Engineering, Henan University of Urban Construction, Pingdingshan, 467036, China
| | - Luyang Li
- School of Ecology and Environment, Zhengzhou University, Zhengzhou, 450001, China
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