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Mahto KU, Kumari S, Das S. Unraveling the complex regulatory networks in biofilm formation in bacteria and relevance of biofilms in environmental remediation. Crit Rev Biochem Mol Biol 2021; 57:305-332. [PMID: 34937434 DOI: 10.1080/10409238.2021.2015747] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Biofilms are assemblages of bacteria embedded within a matrix of extracellular polymeric substances (EPS) attached to a substratum. The process of biofilm formation is a complex phenomenon regulated by the intracellular and intercellular signaling systems. Various secondary messenger molecules such as cyclic dimeric guanosine 3',5'-monophosphate (c-di-GMP), cyclic adenosine 3',5'-monophosphate (cAMP), and cyclic dimeric adenosine 3',5'-monophosphate (c-di-AMP) are involved in complex signaling networks to regulate biofilm development in several bacteria. Moreover, the cell to cell communication system known as Quorum Sensing (QS) also regulates biofilm formation via diverse mechanisms in various bacterial species. Bacteria often switch to the biofilm lifestyle in the presence of toxic pollutants to improve their survivability. Bacteria within a biofilm possess several advantages with regard to the degradation of harmful pollutants, such as increased protection within the biofilm to resist the toxic pollutants, synthesis of extracellular polymeric substances (EPS) that helps in the sequestration of pollutants, elevated catabolic gene expression within the biofilm microenvironment, higher cell density possessing a large pool of genetic resources, adhesion ability to a wide range of substrata, and metabolic heterogeneity. Therefore, a comprehensive account of the various factors regulating biofilm development would provide valuable insights to modulate biofilm formation for improved bioremediation practices. This review summarizes the complex regulatory networks that influence biofilm development in bacteria, with a major focus on the applications of bacterial biofilms for environmental restoration.
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Affiliation(s)
- Kumari Uma Mahto
- Department of Life Science, Laboratory of Environmental Microbiology and Ecology (LEnME), National Institute of Technology, Odisha, India
| | - Swetambari Kumari
- Department of Life Science, Laboratory of Environmental Microbiology and Ecology (LEnME), National Institute of Technology, Odisha, India
| | - Surajit Das
- Department of Life Science, Laboratory of Environmental Microbiology and Ecology (LEnME), National Institute of Technology, Odisha, India
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Bi J, Tao Q, Huang X, Wang J, Wang T, Hao H. Simultaneous decontamination of multi-pollutants: A promising approach for water remediation. CHEMOSPHERE 2021; 284:131270. [PMID: 34323782 DOI: 10.1016/j.chemosphere.2021.131270] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Revised: 05/08/2021] [Accepted: 06/15/2021] [Indexed: 06/13/2023]
Abstract
Water remediation techniques have been extensively investigated due to the increasing threats of soluble pollutants posed on the human health, ecology and sustainability. Confronted with the complex composition matrix of wastewater, the simultaneous elimination of coexisting multi-pollutants remains a great challenge due to their different physicochemical properties. By integrating multi-contaminants elimination processes into one unit operation, simultaneous decontamination attracted more and more attention under the consideration of versatile applications and economical benefits. In this review, the state-of-art simultaneous decontamination methods were systematically summarized as chemical precipitation, adsorption, photocatalysis, oxidation-reduction, biological removal and membrane filtration. Their applications, mechanisms, mutual interactions, sustainability and recyclability were outlined and discussed in detail. Finally, the prospects and opportunities for future research were proposed for further development of simultaneous decontamination. This work could provide guidelines for the design and fabrication of well-organized simultaneous decontaminating system.
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Affiliation(s)
- Jingtao Bi
- National Engineering Research Center of Industry Crystallization Technology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China
| | - Qingqing Tao
- National Engineering Research Center of Industry Crystallization Technology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China
| | - Xin Huang
- National Engineering Research Center of Industry Crystallization Technology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China; Co-Innovation Center of Chemical Science and Engineering, Tianjin, 300072, China.
| | - Jingkang Wang
- National Engineering Research Center of Industry Crystallization Technology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China; Co-Innovation Center of Chemical Science and Engineering, Tianjin, 300072, China; State Key Laboratory of Chemical Engineering, Zhejiang University, Hangzhou, China
| | - Ting Wang
- National Engineering Research Center of Industry Crystallization Technology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China; Co-Innovation Center of Chemical Science and Engineering, Tianjin, 300072, China
| | - Hongxun Hao
- National Engineering Research Center of Industry Crystallization Technology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China; Co-Innovation Center of Chemical Science and Engineering, Tianjin, 300072, China; State Key Laboratory of Chemical Engineering, Zhejiang University, Hangzhou, China.
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Basak B, Jeon BH, Kurade MB, Saratale GD, Bhunia B, Chatterjee PK, Dey A. Biodegradation of high concentration phenol using sugarcane bagasse immobilized Candida tropicalis PHB5 in a packed-bed column reactor. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 180:317-325. [PMID: 31100595 DOI: 10.1016/j.ecoenv.2019.05.020] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2019] [Revised: 04/20/2019] [Accepted: 05/07/2019] [Indexed: 06/09/2023]
Abstract
Biodegradation of phenolic compounds in wastewater can be effectively carried out in packed bed reactors (PBRs) employing immobilized microorganisms. A low-cost, reusable immobilization matrix in PBR can provide economic advantages in large scale removal of high concentration phenol. In this study, we evaluated the efficiency and reusability of sugarcane bagasse (SCB) as a low-cost immobilization support for high strength phenol removal in recirculating upflow PBR. An isolated yeast Candida tropicalis PHB5 was immobilized onto the SCB support and packed into the reactor to assess phenol biodegradation at various influent flow rates. Scanning electron microscopy exhibited substantial cell attachment within the pith and onto the fibrous strand surface of the SCB support. The PBR showed 97% removal efficiency at the initial phenol concentration of 2400 mg L-1 and 4 mL min-1 flow rate within 54 h. Biodegradation kinetic studies revealed that the phenol biodegradation rate and biodegradation rate constant were dependent on the influent flow rate. A relatively higher rate of biodegradation (64.20 mg g-1 h-1) was found at a flow rate of 8 mL min-1, indicating rapid phenol removal in the PBR. Up to six successive batches (phenol removal >94%) were successfully applied in the PBR using an initial phenol concentration of 400-2400 mg L-1 at a flow rate of 4 mL min-1 indicating the reusability of the PBR system. The SCB-immobilized C. tropicalis could be employed as a cost-effective packing material for removal of high strength phenolic compounds in real scale PBR.
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Affiliation(s)
- Bikram Basak
- Department of Earth Resources & Environmental Engineering, Hanyang University, 222-Wangsimni-ro, Seongdong-gu, Seoul, 04763, Republic of Korea; Department of Biotechnology, National Institute of Technology Durgapur, Mahatma Gandhi Avenue, Durgapur, 713209, India
| | - Byong-Hun Jeon
- Department of Earth Resources & Environmental Engineering, Hanyang University, 222-Wangsimni-ro, Seongdong-gu, Seoul, 04763, Republic of Korea.
| | - Mayur B Kurade
- Department of Earth Resources & Environmental Engineering, Hanyang University, 222-Wangsimni-ro, Seongdong-gu, Seoul, 04763, Republic of Korea
| | - Ganesh D Saratale
- Department of Food Science and Biotechnology, Dongguk University-Seoul, Ilsandong-gu, Goyang-si, Gyeonggi-do, 10326, Republic of Korea
| | - Biswanath Bhunia
- Department of Bioengineering, National Institute of Technology Agartala, Barjala, Agartala, 799055, India
| | - Pradip K Chatterjee
- Energy Research and Technology Group, CSIR-Central Mechanical Engineering Research Institute, Mahatma Gandhi Avenue, Durgapur, 713209, India
| | - Apurba Dey
- Department of Biotechnology, National Institute of Technology Durgapur, Mahatma Gandhi Avenue, Durgapur, 713209, India.
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