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Winger T, Ozdemir C, Narasimhan SL, Srivastava J. Time-Adaptive Machine Learning Models for Predicting the Severity of Heart Failure with Reduced Ejection Fraction. Diagnostics (Basel) 2025; 15:715. [PMID: 40150058 PMCID: PMC11941409 DOI: 10.3390/diagnostics15060715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2025] [Revised: 02/28/2025] [Accepted: 03/01/2025] [Indexed: 03/29/2025] Open
Abstract
Background: Heart failure with reduced ejection fraction is a complex condition that necessitates adaptive, patient-specific management strategies. This study aimed to evaluate the effectiveness of a time-adaptive machine learning model, the Passive-Aggressive classifier, in predicting heart failure with reduced ejection fraction severity and capturing individualized disease progression. Methods: A time-adaptive Passive-Aggressive classifier was employed, using clinical data and Brain Natriuretic Peptide levels as class designators for heart failure with reduced ejection severity. The model was personalized for individual patients by sequentially incorporating clinical visit data from 0-9 visits. The model's adaptability and effectiveness in capturing individual health trajectories were assessed using accuracy and reliability metrics as more data were added. Results: With the progressive introduction of patient-specific data, the model demonstrated significant improvements in predictive capabilities. By incorporating data from nine visits, significant gains in accuracy and reliability were achieved, with the One-Versus-Rest AUC increasing from 0.4884 with no personalization (zero visits) to 0.8253 (nine visits). This demonstrates the model's ability to handle diverse patient presentations and the dynamic nature of disease progression. Conclusions: The findings show the potential of time-adaptive machine learning models, particularly the Passive-Aggressive classifier, in managing heart failure with reduced ejection fraction and other chronic diseases. By enabling precise, patient-specific predictions, these approaches support early detection, tailored interventions, and improved long-term outcomes. This study highlights the feasibility of integrating adaptive models into clinical workflows to enhance the management of heart failure with reduced ejection fraction and similar chronic conditions.
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Affiliation(s)
- Trevor Winger
- Department of Computer Science & Engineering, University of Minnesota, Minneapolis, MN 55455, USA
- Center for Learning Health System Sciences, University of Minnesota, Minneapolis, MN 55455, USA
| | - Cagri Ozdemir
- Department of Computer Science & Engineering, University of North Texas, Denton, TX 76205, USA
| | - Shanti L. Narasimhan
- Division of Pediatric Cardiology, Masonic Children’s Hospital, Minneapolis, MN 55454, USA
| | - Jaideep Srivastava
- Department of Computer Science & Engineering, University of Minnesota, Minneapolis, MN 55455, USA
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2
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Angelaki E, Barmparis GD, Fragkiadakis K, Maragkoudakis S, Zacharis E, Plevritaki A, Kampanieris E, Kalomoirakis P, Kassotakis S, Kochiadakis G, Tsironis GP, Marketou ME. Diagnostic performance of single-lead electrocardiograms for arterial hypertension diagnosis: a machine learning approach. J Hum Hypertens 2025; 39:58-65. [PMID: 39424986 DOI: 10.1038/s41371-024-00969-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Revised: 10/04/2024] [Accepted: 10/09/2024] [Indexed: 10/21/2024]
Abstract
Awareness and early identification of hypertension is crucial in reducing the burden of cardiovascular disease (CVD). Artificial intelligence-based analysis of 12-lead electrocardiograms (ECGs) can already detect arrhythmias and hypertension. We performed an observational two-center study in order to develop a machine learning algorithm to proactively detect arterial hypertension from single-lead ECGs. This could serve as proof of concept with an eye towards todays wearables that record single-lead ECGs. In a prospective observational study, we enrolled 1254 consecutive subjects (539 male, aged 60.22 ± 12.46 years), with and without essential hypertension, and no indications of CVD. A 12-lead ECG of 10 seconds duration in resting position was performed on each subject using a digital electrocardiograph and lead I was isolated for analysis using a calibrated Random Forest (RF). Our RF model classified hypertensive from normotensive subjects on a hold-out test set, with 75% accuracy, ROC/AUC 0.831 (95%CI: 0.781-0.871), sensitivity 72%, and specificity 82% (sensitivity and specificity calculated using a threshold of 0.675). Increasing age, larger values of body mass index, the area under the T wave divided by the QRS complex area, and the area under QRS segment adjusted for BMI, were the four most important features that drove the classification decisions of our model. This study demonstrates the potential to opportunistically detect an undiagnosed hypertension, using a single-lead ECG. While studies with data from wearables are required to translate our findings to actual smartwatch settings, our results could pave the way to innovative technologies for hypertension awareness.
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Affiliation(s)
- Eleni Angelaki
- Institute of Theoretical and Computational Physics, University of Crete, Heraklion, Greece
- Department of Physics, University of Crete, Heraklion, Greece
| | - Georgios D Barmparis
- Institute of Theoretical and Computational Physics, University of Crete, Heraklion, Greece
- Department of Physics, University of Crete, Heraklion, Greece
| | | | - Spyros Maragkoudakis
- Department of Cardiology, Chania General Hospita, 'Agios Georgios', Chania, Greece
| | - Evangelos Zacharis
- Department of Cardiology, Heraklion University General Hospital, Heraklion, Greece
| | - Anthi Plevritaki
- Department of Cardiology, Heraklion University General Hospital, Heraklion, Greece
| | | | - Petros Kalomoirakis
- Department of Cardiology, Heraklion University General Hospital, Heraklion, Greece
| | - Spyros Kassotakis
- Department of Cardiology, Heraklion University General Hospital, Heraklion, Greece
| | - George Kochiadakis
- Department of Cardiology, Heraklion University General Hospital, Heraklion, Greece
- School of Medicine, University of Crete, Heraklion, Greece
| | - Giorgos P Tsironis
- Institute of Theoretical and Computational Physics, University of Crete, Heraklion, Greece
- Department of Physics, University of Crete, Heraklion, Greece
| | - Maria E Marketou
- Department of Cardiology, Heraklion University General Hospital, Heraklion, Greece.
- School of Medicine, University of Crete, Heraklion, Greece.
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Gomez-Ochoa SA, Lanzer JD, Levinson RT. Disease Network-Based Approaches to Study Comorbidity in Heart Failure: Current State and Future Perspectives. Curr Heart Fail Rep 2024; 22:6. [PMID: 39725810 DOI: 10.1007/s11897-024-00693-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 11/26/2024] [Indexed: 12/28/2024]
Abstract
PURPOSE OF REVIEW Heart failure (HF) is often accompanied by a constellation of comorbidities, leading to diverse patient presentations and clinical trajectories. While traditional methods have provided valuable insights into our understanding of HF, network medicine approaches seek to leverage these complex relationships by analyzing disease at a systems level. This review introduces the concepts of network medicine and explores the use of comorbidity networks to study HF and heart disease. RECENT FINDINGS Comorbidity networks are used to understand disease trajectories, predict outcomes, and uncover potential molecular mechanisms through identification of genes and pathways relevant to comorbidity. These networks have shown the importance of non-cardiovascular comorbidities to the clinical journey of patients with HF. However, the community should be aware of important limitations in developing and implementing these methods. Network approaches hold promise for unraveling the impact of comorbidities in the complex presentation and genetics of HF. Methods that consider comorbidity presence and timing have the potential to help optimize management strategies and identify pathophysiological mechanisms.
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Affiliation(s)
- Sergio Alejandro Gomez-Ochoa
- Department of General Internal Medicine and Psychosomatics, Heidelberg University Hospital, Im Neuenheimer Feld 410, 69120, Heidelberg, Germany
| | - Jan D Lanzer
- Institute for Computational Biomedicine, Faculty of Medicine, Heidelberg University, Heidelberg University Hospital, Heidelberg, Germany
| | - Rebecca T Levinson
- Department of General Internal Medicine and Psychosomatics, Heidelberg University Hospital, Im Neuenheimer Feld 410, 69120, Heidelberg, Germany.
- Institute for Computational Biomedicine, Faculty of Medicine, Heidelberg University, Heidelberg University Hospital, Heidelberg, Germany.
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4
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Yoon M, Park JJ, Hur T, Hua CH, Hussain M, Lee S, Choi DJ. Application and Potential of Artificial Intelligence in Heart Failure: Past, Present, and Future. INTERNATIONAL JOURNAL OF HEART FAILURE 2024; 6:11-19. [PMID: 38303917 PMCID: PMC10827704 DOI: 10.36628/ijhf.2023.0050] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Revised: 11/24/2023] [Accepted: 11/26/2023] [Indexed: 02/03/2024]
Abstract
The prevalence of heart failure (HF) is increasing, necessitating accurate diagnosis and tailored treatment. The accumulation of clinical information from patients with HF generates big data, which poses challenges for traditional analytical methods. To address this, big data approaches and artificial intelligence (AI) have been developed that can effectively predict future observations and outcomes, enabling precise diagnoses and personalized treatments of patients with HF. Machine learning (ML) is a subfield of AI that allows computers to analyze data, find patterns, and make predictions without explicit instructions. ML can be supervised, unsupervised, or semi-supervised. Deep learning is a branch of ML that uses artificial neural networks with multiple layers to find complex patterns. These AI technologies have shown significant potential in various aspects of HF research, including diagnosis, outcome prediction, classification of HF phenotypes, and optimization of treatment strategies. In addition, integrating multiple data sources, such as electrocardiography, electronic health records, and imaging data, can enhance the diagnostic accuracy of AI algorithms. Currently, wearable devices and remote monitoring aided by AI enable the earlier detection of HF and improved patient care. This review focuses on the rationale behind utilizing AI in HF and explores its various applications.
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Affiliation(s)
- Minjae Yoon
- Division of Cardiology, Department of Internal Medicine, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, Korea
| | - Jin Joo Park
- Division of Cardiology, Department of Internal Medicine, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, Korea
| | - Taeho Hur
- Division of Cardiology, Department of Internal Medicine, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, Korea
- Department of Computer Science and Engineering, Kyung Hee University, Yongin, Korea
| | - Cam-Hao Hua
- Department of Computer Science and Engineering, Kyung Hee University, Yongin, Korea
| | - Musarrat Hussain
- Department of Computer Science and Engineering, Kyung Hee University, Yongin, Korea
| | - Sungyoung Lee
- Department of Computer Science and Engineering, Kyung Hee University, Yongin, Korea
| | - Dong-Ju Choi
- Division of Cardiology, Department of Internal Medicine, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, Korea
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Harikrishnan S, Koshy L, Ganapathi S, Jeemon P, Kumar RK, Roy A, Reethu S, Ramachandran S, Lakshmikanth L, Sharma M, Chopra VK, Prabhakaran D, Kartha C. Charting a roadmap for heart failure research in India: Insights from a qualitative survey. Indian J Med Res 2023; 158:182-189. [PMID: 37787260 PMCID: PMC10645037 DOI: 10.4103/ijmr.ijmr_2511_21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Indexed: 10/04/2023] Open
Abstract
Background & objectives Heart failure (HF) is emerging as a major health problem in India. The profile of HF in India is divergent from elsewhere in the world. While cardiologists must equip themselves with the requisite clinical management tools, scientists and health policymakers would need epidemiological data on HF and information on the resources required to meet the challenges ahead. The aim of this study was to identify the lacunae and to suggest recommendations to improve HF research. Methods We surveyed a multidisciplinary group of HF experts using a two stage process. An email-based survey was conducted using a structured questionnaire, followed by an online discussion. The experts prioritized the major challenges in convergence research in India and inter-rater agreement values were calculated. In addition, they enlisted potential research gaps and barriers in the domains of epidemiology, diagnostics, management and technology and suggested recommendations to overcome those barriers. Results The experts identified a paucity of data on HF burden, lack of state-of-the-art diagnostic facilities and trained personnel, overt dependence on imported devices/equipment/reagents, lack of interaction/awareness/information among stakeholders and lack of biobanks, as major barriers in HF research. Three fourths of the experts agreed that lack of interaction among stakeholders was the major challenge with the highest inter-rater agreement in both stages (19 out of 25 and 11 out of 17, respectively). The experts recommended the creation of multidisciplinary taskforces dedicated to population sciences, data sciences, technology development and patient management with short-, intermediate- and long-term strategies. Interpretation & conclusions The study generated a wish list for advances in HF research and management, and proposed recommendations for facilitating convergence research as a way forward to reduce the burden of HF in India.
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Affiliation(s)
- Sivadasanpillai Harikrishnan
- Department of Cardiology, Centre for Advanced Research & Excellence in Heart Failure, Thiruvananthapuram, Kerala, India
| | - Linda Koshy
- Centre for Advanced Research & Excellence in Heart Failure, Thiruvananthapuram, Kerala, India
| | - Sanjay Ganapathi
- Department of Cardiology, Centre for Advanced Research & Excellence in Heart Failure, Thiruvananthapuram, Kerala, India
| | - Panniyammakal Jeemon
- Achutha Menon Centre for Health Science Studies, Sree Chitra Tirunal Institute for Medical Sciences & Technology, Thiruvananthapuram, Kerala, India
| | - Raman Krishna Kumar
- Department of Paediatric Cardiology, Centre for Aortic Diseases & Marfan Syndrome, Amrita Institute of Medical Sciences & Research Centre, Thiruvananthapuram, Kerala, India
| | - Adrija Roy
- Achutha Menon Centre for Health Science Studies, Sree Chitra Tirunal Institute for Medical Sciences & Technology, Thiruvananthapuram, Kerala, India
| | - S. Reethu
- Centre for Advanced Research & Excellence in Heart Failure, Thiruvananthapuram, Kerala, India
| | - Surya Ramachandran
- Cardiovascular Diseases & Diabetes Biology Group, Rajiv Gandhi Centre for Biotechnology, Thiruvananthapuram, Kerala, India
| | - L.R. Lakshmikanth
- Centre for Advanced Research & Excellence in Heart Failure, Thiruvananthapuram, Kerala, India
| | - Meenakshi Sharma
- Division of Non-Communicable Diseases, Indian Council of Medical Research, New Delhi, India
| | - Vijay Kumar Chopra
- Department of Cardiothoracic and Vascular Surgery, Max Super Speciality Hospital, New Delhi, India
| | - Dorairaj Prabhakaran
- Centre for Chronic Disease Control, Public Health Foundation, Gurugram, Haryana, India
| | - C.C. Kartha
- Society for Continuing Medical Education & Research, Kerala Institute of Medical Sciences, Thiruvananthapuram, Kerala, India
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6
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D’Amario D, Laborante R, Delvinioti A, Lenkowicz J, Iacomini C, Masciocchi C, Luraschi A, Damiani A, Rodolico D, Restivo A, Ciliberti G, Paglianiti DA, Canonico F, Patarnello S, Cesario A, Valentini V, Scambia G, Crea F. GENERATOR HEART FAILURE DataMart: An integrated framework for heart failure research. Front Cardiovasc Med 2023; 10:1104699. [PMID: 37034335 PMCID: PMC10073733 DOI: 10.3389/fcvm.2023.1104699] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Accepted: 03/07/2023] [Indexed: 04/11/2023] Open
Abstract
Background Heart failure (HF) is a multifaceted clinical syndrome characterized by different etiologies, risk factors, comorbidities, and a heterogeneous clinical course. The current model, based on data from clinical trials, is limited by the biases related to a highly-selected sample in a protected environment, constraining the applicability of evidence in the real-world scenario. If properly leveraged, the enormous amount of data from real-world may have a groundbreaking impact on clinical care pathways. We present, here, the development of an HF DataMart framework for the management of clinical and research processes. Methods Within our institution, Fondazione Policlinico Universitario A. Gemelli in Rome (Italy), a digital platform dedicated to HF patients has been envisioned (GENERATOR HF DataMart), based on two building blocks: 1. All retrospective information has been integrated into a multimodal, longitudinal data repository, providing in one single place the description of individual patients with drill-down functionalities in multiple dimensions. This functionality might allow investigators to dynamically filter subsets of patient populations characterized by demographic characteristics, biomarkers, comorbidities, and clinical events (e.g., re-hospitalization), enabling agile analyses of the outcomes by subsets of patients. 2. With respect to expected long-term health status and response to treatments, the use of the disease trajectory toolset and predictive models for the evolution of HF has been implemented. The methodological scaffolding has been constructed in respect of a set of the preferred standards recommended by the CODE-EHR framework. Results Several examples of GENERATOR HF DataMart utilization are presented as follows: to select a specific retrospective cohort of HF patients within a particular period, along with their clinical and laboratory data, to explore multiple associations between clinical and laboratory data, as well as to identify a potential cohort for enrollment in future studies; to create a multi-parametric predictive models of early re-hospitalization after discharge; to cluster patients according to their ejection fraction (EF) variation, investigating its potential impact on hospital admissions. Conclusion The GENERATOR HF DataMart has been developed to exploit a large amount of data from patients with HF from our institution and generate evidence from real-world data. The two components of the HF platform might provide the infrastructural basis for a combined patient support program dedicated to continuous monitoring and remote care, assisting patients, caregivers, and healthcare professionals.
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Affiliation(s)
- Domenico D’Amario
- Department of Cardiovascular and Pulmonary Sciences, Catholic University of the Sacred Heart, Rome, Italy
- Department of Cardiovascular Sciences, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
- Università del Piemonte Orientale, Dipartimento Medicina Translazionale, Azienda Ospedaliero-Universitaria Maggiore della Carità, Dipartimento Toraco-Cardio-Vascolare, Unità Operativa Complessa di Cardiologia 1, Novara, Italy
| | - Renzo Laborante
- Department of Cardiovascular and Pulmonary Sciences, Catholic University of the Sacred Heart, Rome, Italy
| | - Agni Delvinioti
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Jacopo Lenkowicz
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Chiara Iacomini
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Carlotta Masciocchi
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Alice Luraschi
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Andrea Damiani
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Daniele Rodolico
- Department of Cardiovascular and Pulmonary Sciences, Catholic University of the Sacred Heart, Rome, Italy
| | - Attilio Restivo
- Department of Cardiovascular and Pulmonary Sciences, Catholic University of the Sacred Heart, Rome, Italy
| | - Giuseppe Ciliberti
- Department of Cardiovascular and Pulmonary Sciences, Catholic University of the Sacred Heart, Rome, Italy
| | - Donato Antonio Paglianiti
- Department of Cardiovascular and Pulmonary Sciences, Catholic University of the Sacred Heart, Rome, Italy
| | - Francesco Canonico
- Department of Cardiovascular and Pulmonary Sciences, Catholic University of the Sacred Heart, Rome, Italy
| | - Stefano Patarnello
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Alfredo Cesario
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Vincenzo Valentini
- Department of Bioimaging, Radiation Oncology and Hematology, Fondazione Policlinico Universitario “A. Gemelli” IRCCS, Università Cattolica S. Cuore, Rome, Italy
| | - Giovanni Scambia
- Gemelli Generator, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
| | - Filippo Crea
- Department of Cardiovascular and Pulmonary Sciences, Catholic University of the Sacred Heart, Rome, Italy
- Department of Cardiovascular Sciences, Fondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy
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7
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Keikhosrokiani P, Naidu A/P Anathan AB, Iryanti Fadilah S, Manickam S, Li Z. Heartbeat sound classification using a hybrid adaptive neuro-fuzzy inferences system (ANFIS) and artificial bee colony. Digit Health 2023; 9:20552076221150741. [PMID: 36655183 PMCID: PMC9841877 DOI: 10.1177/20552076221150741] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 12/26/2022] [Indexed: 01/13/2023] Open
Abstract
Cardiovascular disease is one of the main causes of death worldwide which can be easily diagnosed by listening to the murmur sound of heartbeat sounds using a stethoscope. The murmur sound happens at the Lub-Dub, which indicates there are abnormalities in the heart. However, using the stethoscope for listening to the heartbeat sound requires a long time of training then only the physician can detect the murmuring sound. The existing studies show that young physicians face difficulties in this heart sound detection. Use of computerized methods and data analytics for detection and classification of heartbeat sounds will improve the overall quality of sound detection. Many studies have been worked on classifying the heartbeat sound; however, they lack the method with high accuracy. Therefore, this research aims to classify the heartbeat sound using a novel optimized Adaptive Neuro-Fuzzy Inferences System (ANFIS) by artificial bee colony (ABC). The data is cleaned, pre-processed, and MFCC is extracted from the heartbeat sounds. Then the proposed ABC-ANFIS is used to run the pre-processed heartbeat sound, and accuracy is calculated for the model. The results indicate that the proposed ABC-ANFIS model achieved 93% accuracy for the murmur class. The proposed ABC-ANFIS has higher accuracy in compared to ANFIS, PSO ANFIS, SVM, KSTM, KNN, and other existing studies. Thus, this study can assist physicians to classify heartbeat sounds for detecting cardiovascular disease in the early stages.
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Affiliation(s)
- Pantea Keikhosrokiani
- School of Computer Sciences, 26689Universiti Sains Malaysia, Minden, Penang, Malaysia,Pantea Keikhosrokiani, School of Computer Sciences, Universiti Sains Malaysia, Minden 11800, Penang, Malaysia.
| | | | - Suzi Iryanti Fadilah
- School of Computer Sciences, 26689Universiti Sains Malaysia, Minden, Penang, Malaysia
| | - Selvakumar Manickam
- National Advanced IPv6 Centre, 26689Universiti Sains Malaysia, Minden, Penang, Malaysia
| | - Zuoyong Li
- College of Computer and Control Engineering, 26465Minjiang University, Fuzhou, China
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8
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Angelaki E, Barmparis GD, Kochiadakis G, Maragkoudakis S, Savva E, Kampanieris E, Kassotakis S, Kalomoirakis P, Vardas P, Tsironis GP, Marketou ME. Artificial intelligence-based opportunistic screening for the detection of arterial hypertension through ECG signals. J Hypertens 2022; 40:2494-2501. [PMID: 36189460 DOI: 10.1097/hjh.0000000000003286] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
OBJECTIVES Hypertension is a major risk factor for cardiovascular disease (CVD), which often escapes the diagnosis or should be confirmed by several office visits. The ECG is one of the most widely used diagnostic tools and could be of paramount importance in patients' initial evaluation. METHODS We used machine learning techniques based on clinical parameters and features derived from the ECG, to detect hypertension in a population without CVD. We enrolled 1091 individuals who were classified as hypertensive or normotensive, and trained a Random Forest model, to detect the existence of hypertension. We then calculated the values for the Shapley additive explanations (SHAP), a sophisticated feature importance analysis, to interpret each feature's role in the Random Forest's results. RESULTS Our Random Forest model was able to distinguish hypertensive from normotensive patients with accuracy 84.2%, specificity 78.0%, sensitivity 84.0% and area under the receiver-operating curve 0.89, using a decision threshold of 0.6. Age, BMI, BMI-adjusted Cornell criteria (BMI multiplied by RaVL+SV 3 ), R wave amplitude in aVL and BMI-modified Sokolow-Lyon voltage (BMI divided by SV 1 +RV 5 ), were the most important anthropometric and ECG-derived features in terms of the success of our model. CONCLUSION Our machine learning algorithm is effective in the detection of hypertension in patients using ECG-derived and basic anthropometric criteria. Our findings open new horizon in the detection of many undiagnosed hypertensive individuals who have an increased CVD risk.
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Affiliation(s)
- Eleni Angelaki
- Institute of Theoretical and Computational Physics and Department of Physics, University of Crete, Crete, Greece
- Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts, USA
| | - Georgios D Barmparis
- Institute of Theoretical and Computational Physics and Department of Physics, University of Crete, Crete, Greece
| | - George Kochiadakis
- Department of Cardiology, Heraklion University Hospital, Heraklion, Greece
| | | | - Eirini Savva
- Department of Cardiology, Heraklion University Hospital, Heraklion, Greece
| | | | - Spyros Kassotakis
- Department of Cardiology, Heraklion University Hospital, Heraklion, Greece
| | | | - Panos Vardas
- Department of Cardiology, Heraklion University Hospital, Heraklion, Greece
- Heart Sector, Hygeia Hospitals Group, Athens, Greece
| | - Giorgos P Tsironis
- Institute of Theoretical and Computational Physics and Department of Physics, University of Crete, Crete, Greece
- Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts, USA
| | - Maria E Marketou
- Department of Cardiology, Heraklion University Hospital, Heraklion, Greece
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9
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Dai H, Younis A, Kong JD, Puce L, Jabbour G, Yuan H, Bragazzi NL. Big Data in Cardiology: State-of-Art and Future Prospects. Front Cardiovasc Med 2022; 9:844296. [PMID: 35433868 PMCID: PMC9010556 DOI: 10.3389/fcvm.2022.844296] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Accepted: 02/24/2022] [Indexed: 11/23/2022] Open
Abstract
Cardiological disorders contribute to a significant portion of the global burden of disease. Cardiology can benefit from Big Data, which are generated and released by different sources and channels, like epidemiological surveys, national registries, electronic clinical records, claims-based databases (epidemiological Big Data), wet-lab, and next-generation sequencing (molecular Big Data), smartphones, smartwatches, and other mobile devices, sensors and wearable technologies, imaging techniques (computational Big Data), non-conventional data streams such as social networks, and web queries (digital Big Data), among others. Big Data is increasingly having a more and more relevant role, being highly ubiquitous and pervasive in contemporary society and paving the way for new, unprecedented perspectives in biomedicine, including cardiology. Big Data can be a real paradigm shift that revolutionizes cardiological practice and clinical research. However, some methodological issues should be properly addressed (like recording and association biases) and some ethical issues should be considered (such as privacy). Therefore, further research in the field is warranted.
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Affiliation(s)
- Haijiang Dai
- Department of Cardiology, The Third Xiangya Hospital, Central South University, Changsha, China
- Laboratory for Industrial and Applied Mathematics (LIAM), Department of Mathematics and Statistics, York University, Toronto, ON, Canada
| | - Arwa Younis
- Clinical Cardiovascular Research Center, University of Rochester Medical Center, Rochester, New York, NY, United States
| | - Jude Dzevela Kong
- Laboratory for Industrial and Applied Mathematics (LIAM), Department of Mathematics and Statistics, York University, Toronto, ON, Canada
| | - Luca Puce
- Department of Neuroscience, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health (DINOGMI), University of Genoa, Genoa, Italy
| | - Georges Jabbour
- Physical Education Department, College of Education, Qatar University, Doha, Qatar
| | - Hong Yuan
- Department of Cardiology, The Third Xiangya Hospital, Central South University, Changsha, China
- Hong Yuan
| | - Nicola Luigi Bragazzi
- Laboratory for Industrial and Applied Mathematics (LIAM), Department of Mathematics and Statistics, York University, Toronto, ON, Canada
- Department of Neuroscience, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health (DINOGMI), University of Genoa, Genoa, Italy
- Postgraduate School of Public Health, Department of Health Sciences, University of Genoa, Genoa, Italy
- Section of Musculoskeletal Disease, Leeds Institute of Molecular Medicine, NIHR Leeds Musculoskeletal Biomedical Research Unit, University of Leeds, Chapel Allerton Hospital, Leeds, United Kingdom
- *Correspondence: Nicola Luigi Bragazzi
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10
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Abstract
Endotyping is an emerging concept in which diseases are classified into distinct subtypes based on underlying molecular mechanisms. Heart failure (HF) is a complex clinical syndrome that encompasses multiple endotypes with differential risks of adverse events, and varying responses to treatment. Identifying these distinct endotypes requires molecular-level investigation involving multi-"omics" approaches, including genomics, transcriptomics, proteomics, and metabolomics. The derivation of these HF endotypes has important implications in promoting individualized treatment and facilitating more targeted selection of patients for clinical trials, as well as in potentially revealing new pathways of disease that may serve as therapeutic targets. One challenge in the integrated analysis of high-throughput omics and detailed clinical data is that it requires the ability to handle "big data", a task for which machine learning is well suited. In particular, unsupervised machine learning has the ability to uncover novel endotypes of disease in an unbiased approach. In this review, we will discuss recent efforts to identify HF endotypes and cover approaches involving proteomics, transcriptomics, and genomics, with a focus on machine-learning methods.
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Affiliation(s)
- Lusha W Liang
- Division of Cardiology, Department of Medicine, Columbia University Irving Medical Center
| | - Yuichi J Shimada
- Division of Cardiology, Department of Medicine, Columbia University Irving Medical Center
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Victorino J, Alvarez-Franco A, Manzanares M. Functional genomics and epigenomics of atrial fibrillation. J Mol Cell Cardiol 2021; 157:45-55. [PMID: 33887329 DOI: 10.1016/j.yjmcc.2021.04.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Revised: 04/07/2021] [Accepted: 04/12/2021] [Indexed: 02/06/2023]
Abstract
Atrial fibrillation is a progressive cardiac arrhythmia that increases the risk of hospitalization and adverse cardiovascular events. Despite years of study, we still do not have a full comprehension of the molecular mechanism responsible for the disease. The recent implementation of large-scale approaches in both patient samples, population studies and animal models has helped us to broaden our knowledge on the molecular drivers responsible for AF and on the mechanisms behind disease progression. Understanding genomic and epigenomic changes that take place during chronification of AF will prove essential to design novel treatments leading to improved patient care.
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Affiliation(s)
- Jesus Victorino
- Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, Spain; Departamento de Bioquímica, Facultad de Medicina, Universidad Autónoma de Madrid (UAM), Spain
| | - Alba Alvarez-Franco
- Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, Spain
| | - Miguel Manzanares
- Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, Spain; Centro de Biología Molecular Severo Ochoa, CSIC-UAM, Madrid, Spain.
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12
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Angelaki E, Marketou ME, Barmparis GD, Patrianakos A, Vardas PE, Parthenakis F, Tsironis GP. Detection of abnormal left ventricular geometry in patients without cardiovascular disease through machine learning: An ECG-based approach. J Clin Hypertens (Greenwich) 2021; 23:935-945. [PMID: 33507615 PMCID: PMC8678829 DOI: 10.1111/jch.14200] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Revised: 01/07/2021] [Accepted: 01/10/2021] [Indexed: 01/19/2023]
Abstract
Cardiac remodeling is recognized as an important aspect of cardiovascular disease (CVD) progression. Machine learning (ML) techniques were applied to basic clinical parameters and electrocardiographic features, in order to detect abnormal left ventricular geometry (LVG) even before the onset of left ventricular hypertrophy (LVH), in a population without established CVD. The authors enrolled 528 patients with and without essential hypertension, but no other indications of CVD. All patients underwent a full echocardiographic evaluation and were classified into 3 groups; normal geometry (NG), concentric remodeling without LVH (CR), and LVH. Abnormal LVG was identified as increased relative wall thickness (RWT) and/or left ventricular mass index (LVMi). The authors trained supervised ML models to classify patients with abnormal LVG and calculated SHAP values to perform feature importance and interaction analysis. Hypertension, age, body mass index over the Sokolow‐Lyon voltage, QRS‐T angle, and QTc duration were some of the most important features. Our model was able to distinguish NG from CR+LVH combined, with 87% accuracy on an unseen test set, 75% specificity, 97% sensitivity, and area under the receiver operating curve (AUC/ROC) equal to 0.91. The authors also trained our model to classify NG and CR (NG + CR) against those with LVH, with 89% test set accuracy, 93% specificity, 67% sensitivity, and an AUC/ROC value of 0.89, for a 0.4 decision threshold. Our ML algorithm effectively detects abnormal LVG even at early stages. Innovative solutions are needed to improve risk stratification of patients without established CVD, and ML may enable progress in this direction.
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Affiliation(s)
- Eleni Angelaki
- Institute of Theoretical and Computational Physics and Department of Physics, University of Crete, Heraklion, Greece.,Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
| | - Maria E Marketou
- Department of Cardiology, Heraklion University Hospital, Heraklion, Greece
| | - Georgios D Barmparis
- Institute of Theoretical and Computational Physics and Department of Physics, University of Crete, Heraklion, Greece
| | | | - Panos E Vardas
- Department of Cardiology, Heraklion University Hospital, Heraklion, Greece.,Heart Sector, Hygeia Hospitals Group, Athens, Greece
| | | | - Giorgos P Tsironis
- Institute of Theoretical and Computational Physics and Department of Physics, University of Crete, Heraklion, Greece.,Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
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