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Krysiak S, Burda K. The Effect of Removal of External Proteins PsbO, PsbP and PsbQ on Flash-Induced Molecular Oxygen Evolution and Its Biphasicity in Tobacco PSII. Curr Issues Mol Biol 2024; 46:7187-7218. [PMID: 39057069 PMCID: PMC11276211 DOI: 10.3390/cimb46070428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2024] [Revised: 06/30/2024] [Accepted: 07/02/2024] [Indexed: 07/28/2024] Open
Abstract
The oxygen evolution within photosystem II (PSII) is one of the most enigmatic processes occurring in nature. It is suggested that external proteins surrounding the oxygen-evolving complex (OEC) not only stabilize it and provide an appropriate ionic environment but also create water channels, which could be involved in triggering the ingress of water and the removal of O2 and protons outside the system. To investigate the influence of these proteins on the rate of oxygen release and the efficiency of OEC function, we developed a measurement protocol for the direct measurement of the kinetics of oxygen release from PSII using a Joliot-type electrode. PSII-enriched tobacco thylakoids were used in the experiments. The results revealed the existence of slow and fast modes of oxygen evolution. This observation is model-independent and requires no specific assumptions about the initial distribution of the OEC states. The gradual removal of exogenous proteins resulted in a slowdown of the rapid phase (~ms) of O2 release and its gradual disappearance while the slow phase (~tens of ms) accelerated. The role of external proteins in regulating the biphasicity and efficiency of oxygen release is discussed based on observed phenomena and current knowledge.
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Affiliation(s)
| | - Kvetoslava Burda
- Faculty of Physics and Applied Computer Science, AGH University of Krakow, al. Mickiewicza 30, 30-059 Krakow, Poland;
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Krysiak S, Gotić M, Madej E, Moreno Maldonado AC, Goya GF, Spiridis N, Burda K. The effect of ultrafine WO 3 nanoparticles on the organization of thylakoids enriched in photosystem II and energy transfer in photosystem II complexes. Microsc Res Tech 2023; 86:1583-1598. [PMID: 37534550 DOI: 10.1002/jemt.24394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 07/20/2023] [Accepted: 07/21/2023] [Indexed: 08/04/2023]
Abstract
In this work, a new approach to construct self-assembled hybrid systems based on natural PSII-enriched thylakoid membranes (PSII BBY) is demonstrated. Superfine m-WO3 NPs (≈1-2 nm) are introduced into PSII BBY. Transmission electron microscopy (TEM) measurements showed that even the highest concentrations of NPs used did not degrade the PSII BBY membranes. Using atomic force microscopy (AFM), it is shown that the organization of PSII BBY depends strongly on the concentration of NPs applied. This proved that the superfine NPs can easily penetrate the thylakoid membrane and interact with its components. These changes are also related to the modified energy transfer between the external light-harvesting antennas and the PSII reaction center, shown by absorption and fluorescence experiments. The biohybrid system shows stability at pH 6.5, the native operating environment of PSII, so a high rate of O2 evolution is expected. In addition, the light-induced water-splitting process can be further stimulated by the direct interaction of superfine WO3 NPs with the donor and acceptor sides of PSII. The water-splitting activity and stability of this colloidal system are under investigation. RESEARCH HIGHLIGHTS: The phenomenon of the self-organization of a biohybrid system composed of thylakoid membranes enriched in photosystem II and superfine WO3 nanoparticles is studied using AFM and TEM. A strong dependence of the organization of PSII complexes within PSII BBY membranes on the concentration of NPs applied is observed. This observation turns out to be crucial to understand the complexity of the mechanism of the action of WO3 NPs on modifications of energy transfer from external antenna complexes to the PSII reaction center.
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Affiliation(s)
- S Krysiak
- Faculty of Physics and Applied Computer Science, AGH - University of Krakow, Krakow, Poland
| | - M Gotić
- Division of Materials Physics, Ruđer Bošković Institute, Zagreb, Croatia
| | - E Madej
- Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Krakow, Poland
| | - A C Moreno Maldonado
- Condensed Matter Physics Department and Instituto de Nanociencia y Materiales de Aragón, Universidad de Zaragoza, Zaragoza, Spain
| | - G F Goya
- Condensed Matter Physics Department and Instituto de Nanociencia y Materiales de Aragón, Universidad de Zaragoza, Zaragoza, Spain
| | - N Spiridis
- Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Krakow, Poland
| | - K Burda
- Faculty of Physics and Applied Computer Science, AGH - University of Krakow, Krakow, Poland
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Jia P, Wang J, Liang H, Wu ZH, Li F, Li W. Replacement control of Mikania micrantha in orchards and its eco-physiological mechanism. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.1095946] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Mikania micrantha is one of the most notorious invasive weeds in south China, especially in orchard habitats. Based on the principle of niche competition, screening plants with strong competitiveness and managing vacant niches through natural alternative methods (replacement control) were expected to achieve sustainable ecological management of invasive species. To this end, two legumes, Desmodium heterocarpon and Senna tora, were selected to conduct field competition experiments with M. micrantha to investigate the interspecific competitiveness of these two legumes and M. micrantha from the aspects of adaptability to low light and response to drought stress. We found that the relative interaction indexes of D. heterocarpon and S. tora to M. micrantha were both negative and the competitive inhibition of S. tora on M. micrantha was higher than that of D. heterocarpon. Compared with M. micrantha, D. heterocarpon and S. tora have higher photosynthetic efficiency and lower dark respiration efficiency under low-light conditions, thus maintaining positive plant carbon balance capacity in the low-light understory and becoming more shade-tolerant. Besides, the water stress experiment found that M. micrantha had the lowest tolerance to drought stress, followed by S. tora, and D. heterocarpon was the most drought tolerant. These results showed that D. heterocarpon and S. tora can effectively prevent and control M. micrantha, mainly due to their higher competitiveness, shade tolerance, and drought tolerance. The control effect of D. heterocarpon is better than that of S. tora which is an alien species. Therefore, we believed that the replacement control of the invasive weed M. micrantha by D. heterocarpon is expected to be a sustainable ecological management strategy for M. micrantha biocontrol in the dryland orchard habitat. These findings provide a theoretical basis for the selection of species for alternative control in the future and provide new ideas for solving the problem of repeated regeneration in the existing M. micrantha control process.
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Astakhova TY, Kashin VA, Likhachev VN, Vinogradov GA. Exact solution for polarons on the anharmonic lattice and charge transfer in biopolymers. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY A 2014. [DOI: 10.1134/s0036024414110028] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Hałas A, Orzechowska A, Derrien V, Chumakov AI, Sebban P, Fiedor J, Lipińska M, Zając M, Ślęzak T, Strzałka K, Matlak K, Korecki J, Fiedor L, Burda K. The dynamics of the non-heme iron in bacterial reaction centers from Rhodobacter sphaeroides. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2012; 1817:2095-102. [PMID: 22921693 DOI: 10.1016/j.bbabio.2012.08.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2011] [Revised: 08/06/2012] [Accepted: 08/09/2012] [Indexed: 11/28/2022]
Abstract
We investigate the dynamical properties of the non-heme iron (NHFe) in His-tagged photosynthetic bacterial reaction centers (RCs) isolated from Rhodobacter (Rb.) sphaeroides. Mössbauer spectroscopy and nuclear inelastic scattering of synchrotron radiation (NIS) were applied to monitor the arrangement and flexibility of the NHFe binding site. In His-tagged RCs, NHFe was stabilized only in a high spin ferrous state. Its hyperfine parameters (IS=1.06±0.01mm/s and QS=2.12±0.01mm/s), and Debye temperature (θ(D0)~167K) are comparable to those detected for the high spin state of NHFe in non-His-tagged RCs. For the first time, pure vibrational modes characteristic of NHFe in a high spin ferrous state are revealed. The vibrational density of states (DOS) shows some maxima between 22 and 33meV, 33 and 42meV, and 53 and 60meV and a very sharp one at 44.5meV. In addition, we observe a large contribution of vibrational modes at low energies. This iron atom is directly connected to the protein matrix via all its ligands, and it is therefore extremely sensitive to the collective motions of the RC protein core. A comparison of the DOS spectra of His-tagged and non-His-tagged RCs from Rb. sphaeroides shows that in the latter case the spectrum was overlapped by the vibrations of the heme iron of residual cytochrome c(2), and a low spin state of NHFe in addition to its high spin one. This enabled us to pin-point vibrations characteristic for the low spin state of NHFe.
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Affiliation(s)
- A Hałas
- AGH University of Science and Technology, Faculty of Physics and Applied Computer Science, al. Mickiewicza 30, 30-059 Kraków, Poland
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Chemical proprieties of the iron-quinone complex in mutated reaction centers of Rb. sphaeroides. ACTA ACUST UNITED AC 2011. [DOI: 10.1007/s10751-011-0451-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
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Grobbelaar JU. Microalgal biomass production: challenges and realities. PHOTOSYNTHESIS RESEARCH 2010; 106:135-144. [PMID: 20582473 DOI: 10.1007/s11120-010-9573-5] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2010] [Accepted: 06/08/2010] [Indexed: 05/29/2023]
Abstract
The maximum quantum yield (Φ (max)), calculated from the maximum chlorophyll a specific photosynthetic rate divided by the quantum absorption per unit chlorophyll a, is 8 photons or 0.125 mol C per mol Quanta light energy. For the average solar radiation that reaches the earth's surface this relates to a photosynthetic yield of 1.79 g(dw) m(-2) day(-1) per percentage photosynthetic efficiency and it could be doubled for sunny, dry and hot areas. Many factors determine volumetric yields of mass algal cultures and it is not simply a question of extrapolating controlled laboratory rates to large scale outdoor production systems. This is an obvious mistake many algal biotechnology start-up companies make. Closed photobioreactors should be able to outperform open raceway pond cultures because of the synergistic enhancement of a reduced boundary layer and short light/dark fluctuations at high turbulences. However, this has not been shown on any large scale and to date the industrial norm for very large production systems is open raceway production ponds. Microalgal biomass production offers real opportunities for addressing issues such as CO(2) sequestration, biofuel production and wastewater treatment, and it should be the preferred research emphasis.
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Affiliation(s)
- Johan U Grobbelaar
- Department of Plant Sciences, University of the Free State, Bloemfontein 9300, South Africa.
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Orzechowska A, Lipińska M, Fiedor J, Chumakov A, Zając M, Ślęzak T, Matlak K, Strzałka K, Korecki J, Fiedor L, Burda K. Coupling of collective motions of the protein matrix to vibrations of the non-heme iron in bacterial photosynthetic reaction centers. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2010; 1797:1696-704. [DOI: 10.1016/j.bbabio.2010.06.012] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2009] [Revised: 06/23/2010] [Accepted: 06/26/2010] [Indexed: 10/19/2022]
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Lipińska M, Orzechowska A, Fiedor J, Chumakov AI, Ślȩzak T, Zaja̧c M, Matlak K, Korecki J, Hałas A, Strzałka K, Fiedor L, Burda K. Influence of Cd2+on the spin state of non-heme iron and on protein local motions in reactions centers from purple photosynthetic bacteriumRhodospirilium rubrum. ACTA ACUST UNITED AC 2010. [DOI: 10.1088/1742-6596/217/1/012021] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Fragata M, Viruvuru V. Temperature Dependence of Oxygen Evolution in the Thylakoid Membrane: Thermal Transitions above 273 K in Steady-State Conditions. J Phys Chem B 2009; 113:15392-8. [DOI: 10.1021/jp9071586] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mário Fragata
- Département de Chimie-Biologie, Section de Chimie et Biochimie, et Groupe de Recherche en Biologie Végétale, Université du Québec à Trois-Rivières, Trois-Rivières (Québec), G9A5H7, Canada
| | - Venkataramanaiah Viruvuru
- Département de Chimie-Biologie, Section de Chimie et Biochimie, et Groupe de Recherche en Biologie Végétale, Université du Québec à Trois-Rivières, Trois-Rivières (Québec), G9A5H7, Canada
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Abstract
Electron transfer (ET) processes in proteins drive the energy conversion processes in cells and are also involved in metabolic catalysis. In this tutorial review, the models explaining ET through peptides and proteins are discussed and the biological relevance of ET is elucidated.
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Affiliation(s)
- Meike Cordes
- Department of Chemistry, University of Basel, St. Johanns Ring 19, CH-4056 Basel, Switzerland
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