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Blood and urine biomarkers in invasive ductal breast cancer: Mass spectrometry applied to identify metabolic alterations. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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Eniu DT, Romanciuc F, Moraru C, Goidescu I, Eniu D, Staicu A, Rachieriu C, Buiga R, Socaciu C. The decrease of some serum free amino acids can predict breast cancer diagnosis and progression. Scandinavian Journal of Clinical and Laboratory Investigation 2019; 79:17-24. [PMID: 30880483 DOI: 10.1080/00365513.2018.1542541] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
This study was targeted on a metabolomic approach to compare the blood serum free amino acid profiles and concentration of confirmed breast cancer (stages I-III) patients to healthy controls in order to establish reliable biomarkers of early detection and prediction of breast cancer. The ultra-high-performance liquid chromatography coupled with mass spectrometry using positive ionization electrospray was applied for the picoline-derivatized serum free amino acids using the EZ:faastTM kit. Multivariate statistical analysis principal component analysis, partial least squares discrimination analysis and univariate analysis were applied in order to discriminate between patient groups and putative amino acid biomarkers for breast cancer. A significant decrease of amino acid concentrations between the breast cancer group and the control group was positively correlated with breast cancer progression. Arginine, Alanine, Isoleucine, Tyrosine and Tryptophan were identified as being good potential discriminants (AUROC ≥0.85) and suitable candidates to diagnose and predict the breast cancer progression.
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Affiliation(s)
- Dan Tudor Eniu
- a Department of Surgical Oncology , Iuliu Hatieganu University of Medicine and Pharmacy , Cluj-Napoca , Romania
| | - Florina Romanciuc
- b University of Agricultural Sciences and Veterinary Medicine , Department of Biotechnologies Cluj-Napoca , Romania.,c RTD Center for Applied Biotechnology in Diagnosis and Molecular Therapy, Cluj-Napoca, Romania
| | - Corina Moraru
- c RTD Center for Applied Biotechnology in Diagnosis and Molecular Therapy, Cluj-Napoca, Romania
| | - Iulian Goidescu
- d 1st Department of Obstetrics and Gynecology , Iuliu Haţieganu University of Medicine and Pharmacy , Cluj-Napoca , Romania
| | - Daniela Eniu
- e Department of Biophysics , Iuliu Hatieganu University of Medicine and Pharmacy , Cluj-Napoca , Romania
| | - Adelina Staicu
- d 1st Department of Obstetrics and Gynecology , Iuliu Haţieganu University of Medicine and Pharmacy , Cluj-Napoca , Romania
| | - Claudiu Rachieriu
- a Department of Surgical Oncology , Iuliu Hatieganu University of Medicine and Pharmacy , Cluj-Napoca , Romania
| | - Rareş Buiga
- f Department of Pathology , Iuliu Hatieganu University of Medicine and Pharmacy , Cluj-Napoca , Romania
| | - Carmen Socaciu
- b University of Agricultural Sciences and Veterinary Medicine , Department of Biotechnologies Cluj-Napoca , Romania.,c RTD Center for Applied Biotechnology in Diagnosis and Molecular Therapy, Cluj-Napoca, Romania
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Carotenuto D, Luchinat C, Marcon G, Rosato A, Turano P. The Da Vinci European BioBank: A Metabolomics-Driven Infrastructure. J Pers Med 2015; 5:107-19. [PMID: 25913579 PMCID: PMC4493490 DOI: 10.3390/jpm5020107] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2015] [Revised: 04/02/2015] [Accepted: 04/16/2015] [Indexed: 11/16/2022] Open
Abstract
We present here the organization of the recently-constituted da Vinci European BioBank (daVEB, https://www.davincieuropeanbiobank.org/it). The biobank was created as an infrastructure to support the activities of the Fiorgen Foundation (http://www.fiorgen.net/), a nonprofit organization that promotes research in the field of pharmacogenomics and personalized medicine. The way operating procedures concerning samples and data have been developed at daVEB largely stems from the strong metabolomics connotation of Fiorgen and from the involvement of the scientific collaborators of the foundation in international/European projects aimed to tackle the standardization of pre-analytical procedures and the promotion of data standards in metabolomics.
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Affiliation(s)
- Dario Carotenuto
- Da Vinci European BioBank, FiorGen Foundation, via Sacconi 6, 50019 Sesto Fiorentino, Florence, Italy.
| | - Claudio Luchinat
- Magnetic Resonance Center (CERM), University of Florence, Via L. Sacconi 6, 50019 Sesto Fiorentino, Italy.
- Department of Chemistry, University of Florence, Via della Lastruccia 3, 50019 Sesto Fiorentino, Italy.
| | - Giordana Marcon
- Da Vinci European BioBank, FiorGen Foundation, via Sacconi 6, 50019 Sesto Fiorentino, Florence, Italy.
| | - Antonio Rosato
- Magnetic Resonance Center (CERM), University of Florence, Via L. Sacconi 6, 50019 Sesto Fiorentino, Italy.
- Department of Chemistry, University of Florence, Via della Lastruccia 3, 50019 Sesto Fiorentino, Italy.
| | - Paola Turano
- Da Vinci European BioBank, FiorGen Foundation, via Sacconi 6, 50019 Sesto Fiorentino, Florence, Italy.
- Magnetic Resonance Center (CERM), University of Florence, Via L. Sacconi 6, 50019 Sesto Fiorentino, Italy.
- Department of Chemistry, University of Florence, Via della Lastruccia 3, 50019 Sesto Fiorentino, Italy.
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