1
|
Sánchez C. Fusarium as a promising fungal genus with potential application in bioremediation for pollutants mitigation: A review. Biotechnol Adv 2024; 77:108476. [PMID: 39536920 DOI: 10.1016/j.biotechadv.2024.108476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2024] [Revised: 10/29/2024] [Accepted: 11/08/2024] [Indexed: 11/16/2024]
Abstract
Fusarium is genetically diverse and widely distributed geographically. It is one of the genera with more endophytes (which cause no damage to the host plants). This review highlights the capability of Fusarium species to degrade environmental pollutants and describes the biodegradation pathways of some of the emerging environmental contaminants. Some Fusarium species use metabolic strategies enabling them to efficiently mineralize high concentrations of toxic environmental pollutants. These fungi can degrade hydrocarbons, pesticides, herbicides, dyes, pharmaceutical compounds, explosives, plastics, and plastic additives, among other pollutants, and possess high metal biosorption capabilities. According to data from consulted reports, Fusarium strains showed a percentage of biodegradation of a variety of contaminants ranging between 30 % and 100 % for different tested concentrations (from 1 mg to 10 g/L) in a time range between 10 h and 90 d. Enzymes such as esterase, cutinase, laccase, lignin peroxidase, manganese peroxidase, dehydrogenase, lipase, dioxygenase, and phosphoesterase were detected during the pollutant biodegradation process. Fusarium oxysporum, Fusarium solani, and Fusarium culmorum are the most studied species of this genus. Owing to their metabolic versatility, these fungal species and their enzymes represent promising tools for bioremediation applications to mitigate the adverse effects of environmental pollution.
Collapse
Affiliation(s)
- Carmen Sánchez
- Laboratory of Biotechnology, Research Centre for Biological Sciences, Universidad Autónoma de Tlaxcala, Ixtacuixtla, Tlaxcala 90120, Mexico.
| |
Collapse
|
2
|
Chen Y, Wang Y, Xu Y, Sun J, Yang L, Feng C, Wang J, Zhou Y, Zhang ZM, Wang Y. Molecular insights into the catalytic mechanism of plasticizer degradation by a monoalkyl phthalate hydrolase. Commun Chem 2023; 6:45. [PMID: 36859434 PMCID: PMC9977937 DOI: 10.1038/s42004-023-00846-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Accepted: 02/22/2023] [Indexed: 03/03/2023] Open
Abstract
Phthalate acid esters (PAEs), a group of xenobiotic compounds used extensively as plasticizers, have attracted increasing concern for adverse effects to human health and the environment. Microbial degradation relying on PAE hydrolases is a promising treatment. However, only a limited number of PAE hydrolases were characterized to date. Here we report the structures of MehpH, a monoalkyl phthalate (MBP) hydrolase that catalyzes the reaction of MBP to phthalic acid and the corresponding alcohol, in apo and ligand-bound form. The structures reveal a positively-charged catalytic center, complementary to the negatively-charged carboxyl group on MBP, and a penetrating tunnel that serves as exit of alcohol. The study provides a first glimpse into the enzyme-substrate binding model for PAE hydrolases, leading strong support to the development of better enzymes in the future.
Collapse
Affiliation(s)
- Yebao Chen
- grid.79703.3a0000 0004 1764 3838School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006 China
| | - Yongjin Wang
- grid.258164.c0000 0004 1790 3548International Cooperative Laboratory of Traditional Chinese Medicine Modernization and Innovative Drug Development of Chinese Ministry of Education (MOE), College of Pharmacy, Jinan University, Guangzhou, 510632 China
| | - Yang Xu
- grid.79703.3a0000 0004 1764 3838School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640 China
| | - Jiaojiao Sun
- grid.79703.3a0000 0004 1764 3838School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640 China
| | - Liu Yang
- grid.79703.3a0000 0004 1764 3838School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640 China
| | - Chenhao Feng
- grid.79703.3a0000 0004 1764 3838School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640 China
| | - Jia Wang
- grid.79703.3a0000 0004 1764 3838School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640 China
| | - Yang Zhou
- International Cooperative Laboratory of Traditional Chinese Medicine Modernization and Innovative Drug Development of Chinese Ministry of Education (MOE), College of Pharmacy, Jinan University, Guangzhou, 510632, China.
| | - Zhi-Min Zhang
- International Cooperative Laboratory of Traditional Chinese Medicine Modernization and Innovative Drug Development of Chinese Ministry of Education (MOE), College of Pharmacy, Jinan University, Guangzhou, 510632, China.
| | - Yonghua Wang
- School of Food Science and Engineering, South China University of Technology, Guangzhou, 510640, China. .,Guangdong Youmei Institute of Inteligent Bio-manufacturing, Foshan, Guangdong, 528200, China.
| |
Collapse
|
3
|
Savinova OS, Shabaev AV, Glazunova OA, Moiseenko KV, Fedorova TV. Benzyl Butyl Phthalate and Diisobutyl Phthalate Biodegradation by White-rot Fungus Trametes hirsuta. APPL BIOCHEM MICRO+ 2022. [DOI: 10.1134/s0003683822100118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/01/2023]
|
4
|
González-Márquez A, Volke-Sepulveda T, Díaz R, Sánchez C. Enhanced esterase activity during the degradation of dibutyl phthalate by Fusarium species in liquid fermentation. J Ind Microbiol Biotechnol 2021; 48:6371103. [PMID: 34529076 PMCID: PMC8788865 DOI: 10.1093/jimb/kuab062] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Accepted: 09/13/2021] [Indexed: 12/03/2022]
Abstract
Dibutyl phthalate (DBP) is one of the most abundantly produced and used plasticizers and is incorporated into plastic to make it more flexible and malleable. DBP has been found to be an environmental contaminant and reported as an endocrine disruptor. Therefore, it is crucial to develop ecofriendly alternatives to eliminate phthalate pollution. In the present research, the growth of F. culmorum and F. oxysporum in the presence of DBP was studied in liquid fermentation. The esterase activity, specific growth rate, and growth and enzymatic yield parameters were determined in DBP-supplemented media (1,500 or 2,000 mg/L) and in control medium (lacking DBP). These results show that in general, for both Fusarium species, the highest esterase activities, specific growth rates, and yield parameters were observed in media supplemented with DBP. It was observed that 1,500 and 2,000 mg of DBP/L did not inhibit F. culmorum or F. oxysporum growth and that DBP induced esterase production in both fungi. These organisms have much to offer in the mitigation of environmental pollution caused by the endocrine disruptor DBP. This study reports, for the first time, esterase production during the degradation of high concentrations (i.e., 1,500 and 2,000 mg/L) of DBP by F. culmorum F. oxysporum.
Collapse
Affiliation(s)
- Angel González-Márquez
- Maestría en Ciencias Biológicas, Universidad Autónoma de Tlaxcala, Tlaxcala, CP 90000, Mexico
| | - Tania Volke-Sepulveda
- Departamento de Biotecnología, Universidad Autónoma Metropolitana-Iztapalapa, Av. San Rafael Atlixco N° 186, Col. Vicentina C.P. 09340, Iztapalapa, CDMX, Mexico
| | - Rubén Díaz
- Laboratory of Biotechnology, Research Centre for Biological Sciences, Universidad Autónoma de Tlaxcala, Ixtacuixtla, CP. 90062, Tlaxcala, Mexico
| | - Carmen Sánchez
- Laboratory of Biotechnology, Research Centre for Biological Sciences, Universidad Autónoma de Tlaxcala, Ixtacuixtla, CP. 90062, Tlaxcala, Mexico
| |
Collapse
|
5
|
Lumio RT, Tan MA, Magpantay HD. Biotechnology-based microbial degradation of plastic additives. 3 Biotech 2021; 11:350. [PMID: 34221820 PMCID: PMC8217394 DOI: 10.1007/s13205-021-02884-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Accepted: 06/06/2021] [Indexed: 10/21/2022] Open
Abstract
Plastic additives are agents responsible to the flame resistance, durability, microbial resistance, and flexibility of plastic products. High demand for production and use of plastic additives is associated with environmental accumulation and various health hazards. One of the suitable methods of depleting plastic additive in the environment is bioremediation as it offers cost-efficiency, convenience, and sustainability. Microbial activity is one of the effective ways of detoxifying various compounds as microorganisms can adapt in an environment with high prevalence of pollutants. The present review discusses the use and abundance of these plastic additives, their health-related risks, the microorganisms capable of degrading them, the proposed mechanism of biodegradation, and current innovations capable of improving the efficiency of bioremediation.
Collapse
Affiliation(s)
- Rob T. Lumio
- Chemistry Department, De La Salle University, 2401 Taft Avenue, 0922 Manila, Philippines
| | - Mario A. Tan
- The Graduate School, University of Santo Tomas, Manila, Philippines
- College of Science and Research Center for the Natural and Applied Sciences, University of Santo, Tomas, Manila, Philippines
| | - Hilbert D. Magpantay
- Chemistry Department, De La Salle University, 2401 Taft Avenue, 0922 Manila, Philippines
| |
Collapse
|
6
|
Amobonye A, Bhagwat P, Ranjith D, Mohanlall V, Pillai S. Characterisation, pathogenicity and hydrolytic enzyme profiling of selected Fusarium species and their inhibition by novel coumarins. Arch Microbiol 2021; 203:3495-3508. [PMID: 33912984 DOI: 10.1007/s00203-021-02335-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Revised: 04/12/2021] [Accepted: 04/13/2021] [Indexed: 11/30/2022]
Abstract
Three Fusarium species isolated locally were characterised by the amplification of their rDNA ITS region, host specificity, and hydrolytic enzyme production. The strains were identified as Fusarium pseudoanthophilum, which is being reported for the first time in South Africa, as well as F. foetens and F. fujikuroi. All the three strains were capable of infecting vegetables such as tomatoes, bell and cayenne peppers, belonging to the Solanaceae family. The Fusarium strains also showed significant production of cell wall degrading enzymes in vitro, such as amylase, cellulase, xylanase, and polygalacturonase, thus highlighting the possibilities of these enzymes as pathogenic factors. Subsequently, the strains were discovered to be susceptible to three halogenated coumarins. The most effective of the tested coumarins, 6-bromo3-2,2-dibromoacetyl-2H-chromen-2-one, showed MIC values of 0.125, 0.0625 and 0.125 mg/ml against F. foetens, F. pseudoanthophilum and F. fujikuroi, respectively. The antifungal potentials of the halogenated coumarins were confirmed in silico through PASS analysis, toxicity prediction and docking studies. Findings from this study demonstrate the use of these coumarins as potential control agents against the Fusarium species and other pathogenic fungi in general.
Collapse
Affiliation(s)
- Ayodeji Amobonye
- Department of Biotechnology and Food Science, Faculty of Applied Sciences, Durban University of Technology, P.O. BOX 1334, Durban, 4000, South Africa
| | - Prashant Bhagwat
- Department of Biotechnology and Food Science, Faculty of Applied Sciences, Durban University of Technology, P.O. BOX 1334, Durban, 4000, South Africa
| | - Divona Ranjith
- Department of Biotechnology and Food Science, Faculty of Applied Sciences, Durban University of Technology, P.O. BOX 1334, Durban, 4000, South Africa
| | - Viresh Mohanlall
- Department of Biotechnology and Food Science, Faculty of Applied Sciences, Durban University of Technology, P.O. BOX 1334, Durban, 4000, South Africa
| | - Santhosh Pillai
- Department of Biotechnology and Food Science, Faculty of Applied Sciences, Durban University of Technology, P.O. BOX 1334, Durban, 4000, South Africa.
| |
Collapse
|