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Giesecke Y, Soete S, MacKinnon K, Tsiaras T, Ward M, Althobaiti M, Suveges T, Lucocq JE, McKenna SJ, Lucocq JM. Developing Electron Microscopy Tools for Profiling Plasma Lipoproteins Using Methyl Cellulose Embedment, Machine Learning and Immunodetection of Apolipoprotein B and Apolipoprotein(a). Int J Mol Sci 2020; 21:ijms21176373. [PMID: 32887372 PMCID: PMC7503711 DOI: 10.3390/ijms21176373] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 07/26/2020] [Accepted: 08/06/2020] [Indexed: 01/17/2023] Open
Abstract
Plasma lipoproteins are important carriers of cholesterol and have been linked strongly to cardiovascular disease (CVD). Our study aimed to achieve fine-grained measurements of lipoprotein subpopulations such as low-density lipoprotein (LDL), lipoprotein(a) (Lp(a), or remnant lipoproteins (RLP) using electron microscopy combined with machine learning tools from microliter samples of human plasma. In the reported method, lipoproteins were absorbed onto electron microscopy (EM) support films from diluted plasma and embedded in thin films of methyl cellulose (MC) containing mixed metal stains, providing intense edge contrast. The results show that LPs have a continuous frequency distribution of sizes, extending from LDL (> 15 nm) to intermediate density lipoprotein (IDL) and very low-density lipoproteins (VLDL). Furthermore, mixed metal staining produces striking “positive” contrast of specific antibodies attached to lipoproteins providing quantitative data on apolipoprotein(a)-positive Lp(a) or apolipoprotein B (ApoB)-positive particles. To enable automatic particle characterization, we also demonstrated efficient segmentation of lipoprotein particles using deep learning software characterized by a Mask Region-based Convolutional Neural Networks (R-CNN) architecture with transfer learning. In future, EM and machine learning could be combined with microarray deposition and automated imaging for higher throughput quantitation of lipoproteins associated with CVD risk.
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Affiliation(s)
- Yvonne Giesecke
- Structural Cell Biology Group, School of Medicine, University of St Andrews, North Haugh, St Andrews KY16 9TF, UK; (Y.G.); (S.S.); (M.W.); (M.A.)
| | - Samuel Soete
- Structural Cell Biology Group, School of Medicine, University of St Andrews, North Haugh, St Andrews KY16 9TF, UK; (Y.G.); (S.S.); (M.W.); (M.A.)
| | - Katarzyna MacKinnon
- CVIP, School of Science and Engineering, University of Dundee, Dundee DD1 4HN, UK; (K.M.); (T.T.); (T.S.); (S.J.M.)
| | - Thanasis Tsiaras
- CVIP, School of Science and Engineering, University of Dundee, Dundee DD1 4HN, UK; (K.M.); (T.T.); (T.S.); (S.J.M.)
| | - Madeline Ward
- Structural Cell Biology Group, School of Medicine, University of St Andrews, North Haugh, St Andrews KY16 9TF, UK; (Y.G.); (S.S.); (M.W.); (M.A.)
| | - Mohammed Althobaiti
- Structural Cell Biology Group, School of Medicine, University of St Andrews, North Haugh, St Andrews KY16 9TF, UK; (Y.G.); (S.S.); (M.W.); (M.A.)
| | - Tamas Suveges
- CVIP, School of Science and Engineering, University of Dundee, Dundee DD1 4HN, UK; (K.M.); (T.T.); (T.S.); (S.J.M.)
| | - James E. Lucocq
- Department of Orthopaedics, Ninewells Hospital, James Arrott Drive, Dundee DD1 9SY, UK;
| | - Stephen J. McKenna
- CVIP, School of Science and Engineering, University of Dundee, Dundee DD1 4HN, UK; (K.M.); (T.T.); (T.S.); (S.J.M.)
| | - John M. Lucocq
- Structural Cell Biology Group, School of Medicine, University of St Andrews, North Haugh, St Andrews KY16 9TF, UK; (Y.G.); (S.S.); (M.W.); (M.A.)
- Correspondence:
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Schmidt HH, Genschel JC, Wagner S, Manns MP. Quantification of lipoprotein(a): comparison of an automated latex-enhanced nephelometric assay with an immunoenzymometric method. EUROPEAN JOURNAL OF CLINICAL CHEMISTRY AND CLINICAL BIOCHEMISTRY : JOURNAL OF THE FORUM OF EUROPEAN CLINICAL CHEMISTRY SOCIETIES 1996; 34:119-24. [PMID: 8833643 DOI: 10.1515/cclm.1996.34.2.119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
Several studies indicate the relevance of lipoprotein(a) (Lp(a)) in the genesis of premature coronary artery disease. A simple method for determining the concentration of Lp(a) is therefore of great interest for assessing the risk of coronary artery disease in patients. We compared a new latex-enhanced immunonephelometric assay (Behringwerke AG, Marburg, Germany), using the Behring Nephelometer System 100, with an established immunoenzymometric assay (Immuno, Heidelberg, Germany). A total of 163 patients was studied. Intra- and inter-assay coefficients of variation were between 2.2% and 7.1%, and between 3.4% and 8.6%, depending on the concentration of Lp(a). The correlation between the studied assays was excellent (r = 0.93, y = 0.98x -1.57, Spearman rank, Passing & Bablok). When values above 1000 mg/l for Lp(a) were excluded, the correlation was even higher. Increased light scattering with particle size, which hitherto has been a disadvantage of the nephelometric technique, seems to be negligible using the improved latex-enhanced approach. In patients with triacylglycerol values above 4.5 mmol/l (n = 19) there was no interference with the Behring system, i.e. the results of the nephelometric method were not increasing, and they agreed with those of the immunoenzymometric assay. In conclusion, this new latex-enhanced nephelometric immunoassay represents a rapid and precise method for the quantification of Lp(a).
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Affiliation(s)
- H H Schmidt
- Abt. Gastroenterologie und Hepatologie, Medizinische Hochschule Hannover, Germany
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