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For: Allen MW, Urbauer RJB, Zaidi A, Williams TD, Urbauer JL, Johnson CK. Fluorescence labeling, purification, and immobilization of a double cysteine mutant calmodulin fusion protein for single-molecule experiments. Anal Biochem 2005;325:273-84. [PMID: 14751262 DOI: 10.1016/j.ab.2003.10.045] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Number Cited by Other Article(s)
1
Samarasinghe TN, Zeng Y, Johnson CK. Microchip Electrophoresis Assay for Calmodulin Binding Proteins. J Sep Sci 2021;44:895-902. [PMID: 34321981 DOI: 10.1002/jssc.202000884] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
2
YUCA ESRA, TAMERLER CANDAN. Self Assembled Recombinant Proteins on Metallic Nanoparticles As Bimodal Imaging Probes. JOM (WARRENDALE, PA. : 1989) 2019;71:1281-1290. [PMID: 34149269 PMCID: PMC8211090 DOI: 10.1007/s11837-018-03325-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2018] [Accepted: 12/28/2018] [Indexed: 05/12/2023]
3
Arnett DC, Bailey SK, Johnson CK. Exploring the conformations of nitric oxide synthase with fluorescence. Front Biosci (Landmark Ed) 2018;23:2133-2145. [PMID: 29772550 DOI: 10.2741/4694] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
4
Xiong Y, Ford NR, Hecht KA, Roesijadi G, Squier TC. Hydrogel Tethering Enhances Interdomain Stabilization of Single-Chain Antibodies. Bioconjug Chem 2017;28:2804-2814. [DOI: 10.1021/acs.bioconjchem.7b00512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
5
Sadoine M, Cerminara M, Kempf N, Gerrits M, Fitter J, Katranidis A. Selective Double-Labeling of Cell-Free Synthesized Proteins for More Accurate smFRET Studies. Anal Chem 2017;89:11278-11285. [DOI: 10.1021/acs.analchem.7b01639] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
6
Kim TJ, Yoo JY, Shim WS. Substitution with a Single Cysteine in the Green Fluorescent Protein-Based Calcium Indicator GCaMP3 Enhances Calcium Sensitivity. J Fluoresc 2017;27:2187-2193. [PMID: 28791525 DOI: 10.1007/s10895-017-2159-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2017] [Accepted: 07/31/2017] [Indexed: 11/25/2022]
7
Hedison TM, Hay S, Scrutton NS. A perspective on conformational control of electron transfer in nitric oxide synthases. Nitric Oxide 2017;63:61-67. [PMID: 27619338 PMCID: PMC5295631 DOI: 10.1016/j.niox.2016.09.002] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2016] [Revised: 09/05/2016] [Accepted: 09/06/2016] [Indexed: 01/20/2023]
8
Hedison TM, Leferink NGH, Hay S, Scrutton NS. Correlating Calmodulin Landscapes with Chemical Catalysis in Neuronal Nitric Oxide Synthase using Time-Resolved FRET and a 5-Deazaflavin Thermodynamic Trap. ACS Catal 2016;6:5170-5180. [PMID: 27563493 PMCID: PMC4993522 DOI: 10.1021/acscatal.6b01280] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2016] [Revised: 06/23/2016] [Indexed: 11/28/2022]
9
Johnson CK, Harms GS. Tracking and localization of calmodulin in live cells. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2016;1863:2017-26. [DOI: 10.1016/j.bbamcr.2016.04.021] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2016] [Revised: 04/19/2016] [Accepted: 04/20/2016] [Indexed: 01/20/2023]
10
DeVore MS, Braimah A, Benson DR, Johnson CK. Single-Molecule FRET States, Conformational Interchange, and Conformational Selection by Dye Labels in Calmodulin. J Phys Chem B 2016;120:4357-64. [PMID: 27111039 DOI: 10.1021/acs.jpcb.6b00864] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
11
Arnett DC, Persechini A, Tran QK, Black DJ, Johnson CK. Fluorescence quenching studies of structure and dynamics in calmodulin-eNOS complexes. FEBS Lett 2015;589:1173-8. [PMID: 25871521 DOI: 10.1016/j.febslet.2015.03.035] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2015] [Revised: 03/17/2015] [Accepted: 03/31/2015] [Indexed: 10/23/2022]
12
Orevi T, Lerner E, Rahamim G, Amir D, Haas E. Ensemble and single-molecule detected time-resolved FRET methods in studies of protein conformations and dynamics. Methods Mol Biol 2014;1076:113-169. [PMID: 24108626 DOI: 10.1007/978-1-62703-649-8_7] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
13
DeVore MS, Gull SF, Johnson CK. Reconstruction of Calmodulin Single-Molecule FRET States, Dye-Interactions, and CaMKII Peptide Binding by MultiNest and Classic Maximum Entropy. Chem Phys 2013;422:10.1016/j.chemphys.2012.11.018. [PMID: 24223465 PMCID: PMC3819237 DOI: 10.1016/j.chemphys.2012.11.018] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
14
Hellstrand E, Kukora S, Shuman CF, Steenbergen S, Thulin E, Kohli A, Krouse B, Linse S, Åkerfeldt KS. Förster resonance energy transfer studies of calmodulin produced by native protein ligation reveal inter-domain electrostatic repulsion. FEBS J 2013;280:2675-87. [DOI: 10.1111/febs.12269] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2012] [Revised: 03/11/2013] [Accepted: 03/26/2013] [Indexed: 12/15/2022]
15
Structural insights into neuronal K+ channel-calmodulin complexes. Proc Natl Acad Sci U S A 2012;109:13579-83. [PMID: 22869708 DOI: 10.1073/pnas.1207606109] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
16
Observation of protein folding/unfolding dynamics of ubiquitin trapped in agarose gel by single-molecule FRET. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2011;41:189-98. [DOI: 10.1007/s00249-011-0772-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2011] [Revised: 10/13/2011] [Accepted: 10/24/2011] [Indexed: 11/27/2022]
17
Backović M, Price ES, Johnson CK, Ralston JP. A distribution-based method to resolve single-molecule Förster resonance energy transfer observations. J Chem Phys 2011;134:145101. [PMID: 21495770 DOI: 10.1063/1.3568946] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
18
Price ES, Aleksiejew M, Johnson CK. FRET-FCS detection of intralobe dynamics in calmodulin. J Phys Chem B 2011;115:9320-6. [PMID: 21688835 PMCID: PMC3151148 DOI: 10.1021/jp203743m] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
19
Chang WH, Liu Y. Bio-Orthogonal Protein Labeling Methods for Single Molecule FRET. J CHIN CHEM SOC-TAIP 2010. [DOI: 10.1002/jccs.201000073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
20
Price ES, DeVore MS, Johnson CK. Detecting intramolecular dynamics and multiple Förster resonance energy transfer states by fluorescence correlation spectroscopy. J Phys Chem B 2010;114:5895-902. [PMID: 20392129 PMCID: PMC2910717 DOI: 10.1021/jp912125z] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
21
Homouz D, Sanabria H, Waxham MN, Cheung MS. Modulation of calmodulin plasticity by the effect of macromolecular crowding. J Mol Biol 2009;391:933-43. [PMID: 19577574 PMCID: PMC2728162 DOI: 10.1016/j.jmb.2009.06.073] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2009] [Revised: 06/24/2009] [Accepted: 06/28/2009] [Indexed: 11/20/2022]
22
Kuiper JM, Pluta R, Huibers WHC, Fusetti F, Geertsma ER, Poolman B. A method for site-specific labeling of multiple protein thiols. Protein Sci 2009;18:1033-41. [PMID: 19388048 DOI: 10.1002/pro.113] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
23
González-Andrade M, Figueroa M, Rodríguez-Sotres R, Mata R, Sosa-Peinado A. An alternative assay to discover potential calmodulin inhibitors using a human fluorophore-labeled CaM protein. Anal Biochem 2009;387:64-70. [DOI: 10.1016/j.ab.2009.01.002] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2008] [Revised: 12/11/2008] [Accepted: 01/09/2009] [Indexed: 10/21/2022]
24
Fekner T, Li X, Lee MM, Chan MK. A pyrrolysine analogue for protein click chemistry. Angew Chem Int Ed Engl 2009;48:1633-5. [PMID: 19156778 DOI: 10.1002/anie.200805420] [Citation(s) in RCA: 106] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
25
Fekner T, Li X, Lee M, Chan M. A Pyrrolysine Analogue for Protein Click Chemistry. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200805420] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
26
Liyanage MR, Zaidi A, Johnson CK. Fluorescence polarization assay for calmodulin binding to plasma membrane Ca2+-ATPase: dependence on enzyme and Ca2+ concentrations. Anal Biochem 2008;385:1-6. [PMID: 19000896 DOI: 10.1016/j.ab.2008.10.022] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2008] [Revised: 10/17/2008] [Accepted: 10/18/2008] [Indexed: 10/21/2022]
27
Spratt DE, Taiakina V, Palmer M, Guillemette JG. FRET conformational analysis of calmodulin binding to nitric oxide synthase peptides and enzymes. Biochemistry 2008;47:12006-17. [PMID: 18947187 DOI: 10.1021/bi801418s] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
28
Priddy TS, Price ES, Johnson CK, Carlson GM. Single molecule analyses of the conformational substates of calmodulin bound to the phosphorylase kinase complex. Protein Sci 2007;16:1017-23. [PMID: 17525461 PMCID: PMC2206654 DOI: 10.1110/ps.062747407] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
29
Slaughter BD, Bieber-Urbauer RJ, Johnson CK. Single-molecule tracking of sub-millisecond domain motion in calmodulin. J Phys Chem B 2007;109:12658-62. [PMID: 16852567 DOI: 10.1021/jp051666o] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
30
Slaughter BD, Bieber Urbauer RJ, Urbauer JL, Johnson CK. Mechanism of calmodulin recognition of the binding domain of isoform 1b of the plasma membrane Ca(2+)-ATPase: kinetic pathway and effects of methionine oxidation. Biochemistry 2007;46:4045-54. [PMID: 17343368 PMCID: PMC2597417 DOI: 10.1021/bi602481u] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
31
Quantitative Colocalisation Imaging: Concepts, Measurements, and Pitfalls. ACTA ACUST UNITED AC 2007. [DOI: 10.1007/978-3-540-71331-9_5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023]
32
Unruh JR, Price ES, Molla RG, Hui R, Johnson CK. Evaluation of a femtosecond fiber laser for two-photon fluorescence correlation spectroscopy. Microsc Res Tech 2006;69:891-3. [PMID: 16886226 DOI: 10.1002/jemt.20358] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
33
Johnson CK. Calmodulin, conformational states, and calcium signaling. A single-molecule perspective. Biochemistry 2006;45:14233-46. [PMID: 17128963 PMCID: PMC2533622 DOI: 10.1021/bi061058e] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
34
Lyubchenko YL, Sherman S, Shlyakhtenko LS, Uversky VN. Nanoimaging for protein misfolding and related diseases. J Cell Biochem 2006;99:52-70. [PMID: 16823798 PMCID: PMC1557678 DOI: 10.1002/jcb.20989] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
35
Sharov V, Dremina E, Galeva N, Williams T, Schöneich C. Quantitative mapping of oxidation-sensitive cysteine residues in SERCA in vivo and in vitro by HPLC-electrospray-tandem MS: selective protein oxidation during biological aging. Biochem J 2006;394:605-15. [PMID: 16307534 PMCID: PMC1383710 DOI: 10.1042/bj20051214] [Citation(s) in RCA: 88] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
36
Slaughter BD, Unruh JR, Price ES, Huynh JL, Bieber Urbauer RJ, Johnson CK. Sampling unfolding intermediates in calmodulin by single-molecule spectroscopy. J Am Chem Soc 2005;127:12107-14. [PMID: 16117552 DOI: 10.1021/ja0526315] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
37
Allen MW, Urbauer RJB, Johnson CK. Single-molecule assays of calmodulin target binding detected with a calmodulin energy-transfer construct. Anal Chem 2005;76:3630-7. [PMID: 15228334 DOI: 10.1021/ac0497656] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
38
Johnson CK, Osborn KD, Allen MW, Slaughter BD. Single-molecule fluorescence spectroscopy: new probes of protein function and dynamics. Physiology (Bethesda) 2005;20:10-4. [PMID: 15653834 DOI: 10.1152/physiol.00037.2004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
39
Osborn KD, Zaidi A, Mandal A, Urbauer RJB, Johnson CK. Single-molecule dynamics of the calcium-dependent activation of plasma-membrane Ca2+-ATPase by calmodulin. Biophys J 2005;87:1892-9. [PMID: 15446271 PMCID: PMC1304593 DOI: 10.1529/biophysj.103.039404] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
40
Smith JJ, Conrad DW, Cuneo MJ, Hellinga HW. Orthogonal site-specific protein modification by engineering reversible thiol protection mechanisms. Protein Sci 2004;14:64-73. [PMID: 15576565 PMCID: PMC2253321 DOI: 10.1110/ps.04965405] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
41
Tang J, Mei E, Green C, Kaplan J, DeGrado WF, Smith AB, Hochstrasser RM. Probing Structural Dynamics of Individual Calmodulin:Peptide Complexes in Hydrogels by Single-Molecule Confocal Microscopy. J Phys Chem B 2004. [DOI: 10.1021/jp0480798] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
42
Slaughter BD, Allen MW, Unruh JR, Bieber Urbauer RJ, Johnson CK. Single-Molecule Resonance Energy Transfer and Fluorescence Correlation Spectroscopy of Calmodulin in Solution. J Phys Chem B 2004. [DOI: 10.1021/jp040098u] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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