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Lv YB, Chen C, Yu QM, Lyu L, Peng YF, Tan XD. Synthesis and biological evaluation of novel pentanediamide derivatives as S-adenosyl-l-homocysteine hydrolase inhibitors. Bioorg Med Chem Lett 2022; 72:128880. [PMID: 35809817 DOI: 10.1016/j.bmcl.2022.128880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Revised: 06/21/2022] [Accepted: 07/04/2022] [Indexed: 11/29/2022]
Abstract
A series of novel pentanediamide derivatives were designed, synthesized and evaluated as S-adenosyl-l-homocysteine hydrolase (SAHase) inhibitors in this study. Some compounds showed good inhibitory activity against SAHase. The optimal compound 7i showed good inhibitory activity against SAHase with IC50 value of 3.58 ± 0.19 μM, cytotoxicity with IC50 values ranging from 13.16 ± 1.44 to 21.23 ± 0.73 μM against four tumor cell lines (MCF-7, A549, MGC-803, Hela) and very weak cytotoxicity (IC50 = 84.22 ± 1.89 μM) on normal LO2 cells. In addition, compound 7i showed potency against respiratory syncytial virus with EC50 value of 27.4 μM and selectivity index of 6.84. Further molecular simulation study suggested that compound 7i had good ADMET properties, and strongly binds to the active site of SAHase. In summary, compound 7i could serve as a new lead compound for further screening novel non-adenosine SAHase inhibitors.
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Affiliation(s)
- Yu-Bin Lv
- College of Pharmacy, Guilin Medical University, Guilin 541199, China; The First People's Hospital of Fangchenggang, Fangchenggang 538021, China
| | - Cong Chen
- College of Pharmacy, Guilin Medical University, Guilin 541199, China
| | - Qi-Ming Yu
- College of Pharmacy, Guilin Medical University, Guilin 541199, China
| | - Liang Lyu
- College of Pharmacy, Guilin Medical University, Guilin 541199, China
| | - Yan-Fen Peng
- College of Pharmacy, Guilin Medical University, Guilin 541199, China.
| | - Xiang-Duan Tan
- College of Pharmacy, Guilin Medical University, Guilin 541199, China.
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Biosynthesis of Methoxymalonyl-acyl Carrier Protein (ACP) as an Extender Unit for Bafilomycin Polyketide in Streptomyces griseus DSM 2608. BIOTECHNOL BIOPROC E 2019. [DOI: 10.1007/s12257-018-0427-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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3
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High throughput detection of deamidation using S-(5′-adenosyl)- l -homocysteine hydrolase and a fluorogenic reagent. J Pharm Biomed Anal 2018; 156:323-327. [DOI: 10.1016/j.jpba.2018.04.051] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2018] [Revised: 04/26/2018] [Accepted: 04/29/2018] [Indexed: 01/03/2023]
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Lee HO, Wang L, Kuo YM, Andrews AJ, Gupta S, Kruger WD. S-adenosylhomocysteine hydrolase over-expression does not alter S-adenosylmethionine or S-adenosylhomocysteine levels in CBS deficient mice. Mol Genet Metab Rep 2018; 15:15-21. [PMID: 30023284 PMCID: PMC6047060 DOI: 10.1016/j.ymgmr.2018.01.002] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2017] [Revised: 01/08/2018] [Accepted: 01/08/2018] [Indexed: 11/29/2022] Open
Abstract
Elevated plasma total homocysteine (tHcy) is associated with a number of human diseases including coronary artery disease, stroke, osteoporosis and dementia. It is highly correlated with intracellular S-adenosylhomocysteine (SAH). Since SAH is a strong inhibitor of methyl-transfer reactions involving the methyl-donor S-adenosylmethionine (SAM), elevation in SAH could be an explanation for the wide association of tHcy and human disease. Here, we have created a transgenic mouse (Tg-hAHCY) that expresses human S-adenosylhomocysteine hydrolase (AHCY) from a zinc-inducible promoter in the liver and kidney. Protein analysis shows that human AHCY is expressed well in both liver and kidney, but elevated AHCY enzyme activity (131% increase) is only detected in the kidney due to the high levels of endogenous mouse AHCY expression in liver. Tg-hAHCY mice were crossed with mice lacking cystathionine β-synthase activity (Tg-I278T Cbs−/−) to explore the effect to AHCY overexpression in the context of elevated serum tHcy and elevated tissue SAM and SAH. Overexpression of AHCY had no significant effect on the phenotypes of Tg-I278T Cbs−/− mice or any effect on the steady state concentrations of methionine, total homocysteine, SAM, SAH, and SAM/SAH ratio in the liver and kidney. Furthermore, enhanced AHCY activity did not lower serum and tissue tHcy or methionine levels. Our data suggests that enhancing AHCY activity does not alter the distribution of methionine recycling metabolites, even when they are greatly elevated by Cbs mutations.
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Key Words
- AHCY, S-adenosylhomocysteine hydrolase
- CBS, cystathionine beta synthase
- CMC, carboxymethylcellulose
- Cbs−, CBS knockout allele
- HA, hemagglutinin
- HHcy, hyperhomocysteinemia
- Hcy, homocysteine
- Met, methionine
- Metabolism
- Methionine
- SAH, S-adenosyl homocysteine
- SAM, S-adenosyl methionine
- Tg-I278T, transgene human CBS containing the I278T mutation
- Transgenic
- Zn, zinc water
- tHcy, total homocysteine
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Affiliation(s)
- Hyung-Ok Lee
- Cancer Biology Program, Fox Chase Cancer Center, Philadelphia, PA, USA
| | - Liqun Wang
- Cancer Biology Program, Fox Chase Cancer Center, Philadelphia, PA, USA
| | - Yin-Ming Kuo
- Cancer Epigenetics Program, Fox Chase Cancer Center, Philadelphia, PA, USA
| | - Andrew J Andrews
- Cancer Epigenetics Program, Fox Chase Cancer Center, Philadelphia, PA, USA
| | - Sapna Gupta
- Cancer Biology Program, Fox Chase Cancer Center, Philadelphia, PA, USA
| | - Warren D Kruger
- Cancer Biology Program, Fox Chase Cancer Center, Philadelphia, PA, USA
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Puri A, Quan Y, Narang AS, Adams M, Gandhi R, Nashine VC. A Fluorescence-Based High-Throughput Coupled Enzymatic Assay for Quantitation of Isoaspartate in Proteins and Peptides. AAPS PharmSciTech 2017; 18:803-808. [PMID: 27342117 DOI: 10.1208/s12249-016-0570-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2016] [Accepted: 06/07/2016] [Indexed: 01/02/2023] Open
Abstract
Formation of isoaspartate (IsoAsp) from spontaneous asparagine (Asn) deamidation or aspartate (Asp) isomerization is one of the most common non-enzymatic pathways of chemical degradation of protein and peptide pharmaceuticals. Rapid quantitation of IsoAsp formation can enable rank-ordering of potential drug candidates, mutants, and formulations as well as support shelf life prediction and stability requirements. A coupled enzymatic fluorescence-based IsoAsp assay (CEFIA) was developed as a high-throughput method for quantitation of IsoAsp in peptides and proteins. In this note, application of this method to two therapeutic candidate proteins with distinct structural scaffolds is described. In addition, the results obtained with this method are compared to those from conventional assays.
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Jia Y, Li P, Song W, Zhao G, Zheng D, Li D, Wang Y, Wang J, Li C, Han K. Rational Design of a Profluorescent Substrate for S-adenosylhomocysteine Hydrolase and its Applications in Bioimaging and Inhibitor Screening. ACS APPLIED MATERIALS & INTERFACES 2016; 8:25818-25824. [PMID: 27626909 DOI: 10.1021/acsami.6b09190] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
S-Adenosylhomocysteine hydrolase (SAHase) is a cellular enzyme that plays a key role in the methylation process, and a potential drug target in the discovery of antiviral and anticancer agents. There is increasing interest in determining its activity in the biological and clinical fields with chemosensors but with limited success so far. Herein, we designed and developed for the first time an off/on-type of fluorogenic substrate (NADE) that is directly responsive to SAHase activity. NADE used 1,8-naphthalimide as the signal reporter and adenosine (Ade) as the reaction center; removal of the Ade moiety enhanced the fluorescence by >10-fold. Kinetic study showed that NADE followed a non-Michaelis-Menten pattern that corresponded to the allosteric behavior of SAHase. NADE showed excellent selectivity and functioned efficiently in cells, allowing the microscopic imaging of SAHase activity. NADE can also be used to identify and measure the effectiveness of inhibitors in a markedly superior way. In a word, NADE would be broadly useful in clinical applications and academic studies.
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Affiliation(s)
- Yan Jia
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences (CAS) , 457 Zhongshan Road, Dalian 116023, P. R. China
- Graduate School of the Chinese Academy of Sciences , Beijing, P. R. China
| | - Peng Li
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences (CAS) , 457 Zhongshan Road, Dalian 116023, P. R. China
| | - Wei Song
- The First Affiliated Hospital of Dalian Medical University , Dalian 116023, P. R. China
| | - Guangjiu Zhao
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences (CAS) , 457 Zhongshan Road, Dalian 116023, P. R. China
| | - Daoyuan Zheng
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences (CAS) , 457 Zhongshan Road, Dalian 116023, P. R. China
| | - Dongmei Li
- College of Pharmacy, Nankai University , Haihe Education Park, 38 Tongyan Road, Tianjin 300353, People's Republic of China
| | - Yanni Wang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences (CAS) , 457 Zhongshan Road, Dalian 116023, P. R. China
- Graduate School of the Chinese Academy of Sciences , Beijing, P. R. China
| | - Jiayue Wang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences (CAS) , 457 Zhongshan Road, Dalian 116023, P. R. China
| | - Chunyan Li
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences (CAS) , 457 Zhongshan Road, Dalian 116023, P. R. China
| | - Keli Han
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences (CAS) , 457 Zhongshan Road, Dalian 116023, P. R. China
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Tan XD, Mao LG, Wu W, Nian SY, Wang GP. Synthesis and biological evaluation of substituted indazolyl amide derivatives as S -adenosyl- l -homocysteine hydrolase inhibitors. CHINESE CHEM LETT 2016. [DOI: 10.1016/j.cclet.2016.03.028] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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8
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Tan X, Wang P, Nian S, Wang G. Design and Synthesis of Amide Derivatives as S-Adenosyl-L-Homocysteine Hydrolase Inhibitors. Chem Pharm Bull (Tokyo) 2014; 62:112-7. [DOI: 10.1248/cpb.c13-00623] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Xiangduan Tan
- Shanghai Institute of Pharmaceutical Industry, China State Institute of Pharmaceutical Industry
| | | | - Siyun Nian
- Shanghai Institute of Pharmaceutical Industry, China State Institute of Pharmaceutical Industry
| | - Guoping Wang
- Shanghai Institute of Pharmaceutical Industry, China State Institute of Pharmaceutical Industry
- Shanghai Shyndec Pharmaceutical Co., Ltd
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