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Chen B, Zhou Z, Shi Y, Gong J, Li C, Zhou T, Li Y, Zhang D, Xu P. Genome-wide evolutionary signatures of climate adaptation in spotted sea bass inhabiting different latitudinal regions. Evol Appl 2023; 16:1029-1043. [PMID: 37216029 PMCID: PMC10197228 DOI: 10.1111/eva.13551] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 04/02/2023] [Accepted: 04/12/2023] [Indexed: 05/24/2023] Open
Abstract
Consideration of the thermal adaptation of species is essential in both evolutionary biology and climate-change biology because it frequently leads to latitudinal gradients of various phenotypes among populations. The spotted sea bass (Lateolabrax maculatus) has a broad latitudinal distribution range along the marginal seas of the Northwest Pacific and thus provides an excellent teleost model for population genetic and climate adaptation studies. We generated over 8.57 million SNP loci using whole-genome resequencing from 100 samples collected at 14 geographic sites (five or ten samples per site). We estimated the genetic structure of the sampled fish and clustered them into three highly differentiated populations. The genetic differentiation pattern estimated by multivariable models combining geographic distance and sea surface temperature differences suggests that isolation by distance and isolation by environment both have significant effects on this species. Further investigation of genome-wide evolutionary signatures of climate adaptation identified many genes related to growth, muscle contraction, and vision that are under positive natural selection. Moreover, the contrasting patterns of natural selection in high-latitude and low-latitude populations prompted different strategies of trade-offs between growth rate and other traits that may play an essential role in adaptation to different local climates. Our results offer an opportunity to better understand the genetic basis of the phenotypic variation in eurythermal fishes inhabiting different climatic regions.
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Affiliation(s)
- Baohua Chen
- State Key Laboratory of Mariculture Breeding, College of Ocean and Earth Sciences Xiamen University Xiamen China
- Shenzhen Research Institute of Xiamen University Shenzhen China
| | - Zhixiong Zhou
- State Key Laboratory of Mariculture Breeding, College of Ocean and Earth Sciences Xiamen University Xiamen China
- Shenzhen Research Institute of Xiamen University Shenzhen China
| | - Yue Shi
- State Key Laboratory of Mariculture Breeding, College of Ocean and Earth Sciences Xiamen University Xiamen China
- Shenzhen Research Institute of Xiamen University Shenzhen China
| | - Jie Gong
- State Key Laboratory of Mariculture Breeding, College of Ocean and Earth Sciences Xiamen University Xiamen China
- Shenzhen Research Institute of Xiamen University Shenzhen China
| | - Chengyu Li
- State Key Laboratory of Mariculture Breeding, College of Ocean and Earth Sciences Xiamen University Xiamen China
- Shenzhen Research Institute of Xiamen University Shenzhen China
| | - Tao Zhou
- State Key Laboratory of Mariculture Breeding, College of Ocean and Earth Sciences Xiamen University Xiamen China
- Fujian Key Laboratory of Genetics and Breeding of Marine Organisms, College of Ocean and Earth Sciences Xiamen University Xiamen China
| | - Yun Li
- The Key Laboratory of Mariculture, Ministry of Education Ocean University of China Qingdao China
| | - Dianchang Zhang
- South China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences Guangzhou China
| | - Peng Xu
- Shenzhen Research Institute of Xiamen University Shenzhen China
- Fujian Key Laboratory of Genetics and Breeding of Marine Organisms, College of Ocean and Earth Sciences Xiamen University Xiamen China
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2
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Beckermann AJ, Medley KA, Adalsteinsson SA, Westby KM. The final countdown: presence of an invasive mosquito extends time to predation for a native mosquito. Biol Invasions 2023. [DOI: 10.1007/s10530-023-03051-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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3
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Santamaría J, Golo R, Verdura J, Tomas F, Ballesteros E, Alcoverro T, Arthur R, Cebrian E. Learning takes time: Biotic resistance by native herbivores increases through the invasion process. Ecol Lett 2022; 25:2525-2539. [PMID: 36209457 PMCID: PMC9828756 DOI: 10.1111/ele.14115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 08/08/2022] [Accepted: 09/08/2022] [Indexed: 01/12/2023]
Abstract
As invasive species spread, the ability of local communities to resist invasion depends on the strength of biotic interactions. Evolutionarily unused to the invader, native predators or herbivores may be initially wary of consuming newcomers, allowing them to proliferate. However, these relationships may be highly dynamic, and novel consumer-resource interactions could form as familiarity grows. Here, we explore the development of effective biotic resistance towards a highly invasive alga using multiple space-for-time approaches. We show that the principal native Mediterranean herbivore learns to consume the invader within less than a decade. At recently invaded sites, the herbivore actively avoided the alga, shifting to distinct preference and high consumptions at older sites. This rapid strengthening of the interaction contributed to the eventual collapse of the alga after an initial dominance. Therefore, our results stress the importance of conserving key native populations to allow communities to develop effective resistance mechanisms against invaders.
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Affiliation(s)
- Jorge Santamaría
- Centre d'Estudis Avançats de Blanes, Consejo Superior de Investigaciones Científicas (CEAB‐CSIC)BlanesSpain,GRMAR, Institut d'Ecologia Aquàtica, Universitat de GironaGironaSpain
| | - Raül Golo
- GRMAR, Institut d'Ecologia Aquàtica, Universitat de GironaGironaSpain
| | - Jana Verdura
- Centre d'Estudis Avançats de Blanes, Consejo Superior de Investigaciones Científicas (CEAB‐CSIC)BlanesSpain,Université Côte d'Azur, CNRSECOSEASNiceFrance
| | - Fiona Tomas
- Marine Ecosystems Dynamics Group—Instituto Mediterráneo de Estudios Avanzados (IMEDEA), Universitat de les Illes Balears (UIB) – Consejo Superior de Investigaciones Científicas (CSIC)EsporlesBalearic IslandsSpain
| | - Enric Ballesteros
- Centre d'Estudis Avançats de Blanes, Consejo Superior de Investigaciones Científicas (CEAB‐CSIC)BlanesSpain
| | - Teresa Alcoverro
- Centre d'Estudis Avançats de Blanes, Consejo Superior de Investigaciones Científicas (CEAB‐CSIC)BlanesSpain
| | - Rohan Arthur
- Centre d'Estudis Avançats de Blanes, Consejo Superior de Investigaciones Científicas (CEAB‐CSIC)BlanesSpain,Nature Conservation FoundationMysoreIndia
| | - Emma Cebrian
- Centre d'Estudis Avançats de Blanes, Consejo Superior de Investigaciones Científicas (CEAB‐CSIC)BlanesSpain,GRMAR, Institut d'Ecologia Aquàtica, Universitat de GironaGironaSpain
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4
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Laskowski KL, Alirangues Nuñez MM, Hilt S, Gessner MO, Mehner T. Predator Group Composition Indirectly Influences Food Web Dynamics through Predator Growth Rates. Am Nat 2022; 199:330-344. [DOI: 10.1086/717812] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Kate L. Laskowski
- Department of Biology and Ecology of Fishes, Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, 12587 Berlin, Germany
- Department of Evolution and Ecology, University of California, Davis, California 95616
| | - Marta M. Alirangues Nuñez
- Department of Ecosystem Research, Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, 12587 Berlin, Germany
| | - Sabine Hilt
- Department of Ecosystem Research, Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, 12587 Berlin, Germany
| | - Mark O. Gessner
- Department of Experimental Limnology, Leibniz Institute of Freshwater Ecology and Inland Fisheries, Alte Fischerhütte 2, 16775 Stechlin, Germany; and Department of Ecology, Berlin Institute of Technology, Ernst-Reuter-Platz 1, 10587 Berlin, Germany
| | - Thomas Mehner
- Department of Biology and Ecology of Fishes, Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, 12587 Berlin, Germany
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5
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Kerr NR, Ingram T. Personality does not predict individual niche variation in a freshwater fish. Behav Ecol 2020. [DOI: 10.1093/beheco/araa117] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Animal populations can exhibit considerable interindividual variation in both behavioral traits and niche use, but the potential connections between these characteristics are rarely compared for the same individuals. We aimed to test whether behavioral syndromes were predictive of individual diet or microhabitat in a native New Zealand freshwater fish, Gobiomorphus cotidianus. We carried out laboratory behavioral assays and repeated habitat and diet measurements in a seminatural mesocosm system. We found considerable repeatability in individual behavior, largely consistent with a proactive/reactive behavioral syndrome. We also found modest individual repeatability in microhabitat use and relatively strong individual specialization in diet. However, no measure of niche use in the mesocosms was significantly predicted by individual personality. Further studies of this type will be needed to assess whether links between individual behavior and resource use are more important in other species or ecological contexts.
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Affiliation(s)
- Nicky R Kerr
- Department of Zoology, University of Otago, Dunedin, New Zealand
| | - Travis Ingram
- Department of Zoology, University of Otago, Dunedin, New Zealand
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Ruland F, Jeschke JM. How biological invasions affect animal behaviour: A global, cross-taxonomic analysis. J Anim Ecol 2020; 89:2531-2541. [PMID: 32745238 DOI: 10.1111/1365-2656.13306] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2019] [Accepted: 06/29/2020] [Indexed: 12/20/2022]
Abstract
In the Anthropocene, species are faced with drastic challenges due to rapid, human-induced changes, such as habitat destruction, pollution and biological invasions. In the case of invasions, native species may change their behaviour to minimize the impacts they sustain from invasive species, and invaders may also adapt to the conditions in their new environment in order to survive and establish self-sustaining populations. We aimed at giving an overview of which changes in behaviour are studied in invasions, and what is known about the types of behaviour that change, the underlying mechanisms and the speed of behavioural changes. Based on a review of the literature, we identified 191 studies and 360 records (some studies reported multiple records) documenting behavioural changes caused by biological invasions in native (236 records from 148 species) or invasive (124 records from 50 species) animal species. This global dataset, which we make openly available, is not restricted to particular taxonomic groups. We found a mild taxonomic bias in the literature towards mammals, birds and insects. In line with the enemy release hypothesis, native species changed their anti-predator behaviour more frequently than invasive species. Rates of behavioural change were evenly distributed across taxa, but not across the types of behaviour. Our findings may help to better understand the role of behaviour in biological invasions as well as temporal changes in both population densities and traits of invasive species, and of native species affected by them.
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Affiliation(s)
- Florian Ruland
- Department of Biology, Chemistry, Pharmacy, Institute of Biology, Freie Universität Berlin, Berlin, Germany.,Leibniz-Institute of Freshwater Ecology and Inland Fisheries (IGB), Berlin, Germany.,Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
| | - Jonathan M Jeschke
- Department of Biology, Chemistry, Pharmacy, Institute of Biology, Freie Universität Berlin, Berlin, Germany.,Leibniz-Institute of Freshwater Ecology and Inland Fisheries (IGB), Berlin, Germany.,Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
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Liss KCM, Lopez LK, Donelson JM, Wong MYL. Predator–prey interactions and metabolic rates are altered in stable and unstable groups in a social fish. OIKOS 2020. [DOI: 10.1111/oik.06690] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Katharina C. M. Liss
- Centre for Sustainable Ecosystems Solutions, School of Earth, Atmospheric and Life Sciences, Univ. of Wollongong Wollongong NSW 2522 Australia
| | - Laura K. Lopez
- LSA Ecology and Evolutionary Biology, Univ. of Michigan MI USA
| | - Jennifer M. Donelson
- ARC Centre of Excellence for Coral Reef Studies, James Cook Univ. Townsville QLD Australia
| | - Marian Y. L. Wong
- Centre for Sustainable Ecosystems Solutions, School of Earth, Atmospheric and Life Sciences, Univ. of Wollongong Wollongong NSW 2522 Australia
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9
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Damas-Moreira I, Oliveira D, Santos JL, Riley JL, Harris DJ, Whiting MJ. Learning from others: an invasive lizard uses social information from both conspecifics and heterospecifics. Biol Lett 2018; 14:rsbl.2018.0532. [PMID: 30333265 DOI: 10.1098/rsbl.2018.0532] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Accepted: 09/14/2018] [Indexed: 11/12/2022] Open
Abstract
Species that are able to solve novel problems through social learning from either a conspecific or a heterospecific may gain a significant advantage in new environments. We tested the ability of a highly successful invasive species, the Italian wall lizard Podarcis sicula, to solve a novel foraging task when social information was available from both a conspecific and an unfamiliar heterospecific (Podarcis bocagei). We found that Italian wall lizards that had access to social information made fewer errors, regardless of whether the demonstrator was a conspecific or a heterospecific, compared to Italian wall lizards that individually learnt the same task. We suggest that social learning could be a previously underappreciated, advantageous mechanism facilitating invasions.
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Affiliation(s)
- Isabel Damas-Moreira
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
| | - Daniel Oliveira
- CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Porto 4485-661, Portugal
| | - Joana L Santos
- CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Porto 4485-661, Portugal
| | - Julia L Riley
- Ecology and Evolution Research Centre, School of Biological, Earth, and Environmental Sciences, The University of New South Wales, Sydney, New South Wales 2052, Australia.,Department of Botany and Zoology, Stellenbosch University, Stellenbosch 7600, South Africa
| | - D James Harris
- CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Porto 4485-661, Portugal
| | - Martin J Whiting
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
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