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Abadjieva D, Georgiev B, Gerzilov V, Tsvetkova I, Taushanova P, Todorova K, Hayrabedyan S. Machine Learning Approach for Muscovy Duck ( Cairina moschata) Semen Quality Assessment. Animals (Basel) 2023; 13:ani13101596. [PMID: 37238026 DOI: 10.3390/ani13101596] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Revised: 04/30/2023] [Accepted: 05/08/2023] [Indexed: 05/28/2023] Open
Abstract
This study aimed to develop a comprehensive approach for assessing fresh ejaculate from Muscovy duck (Cairina moschata) drakes to fulfil the requirements of artificial insemination in farm practices. The approach combines sperm kinetics (CASA) with non-kinetic parameters, such as vitality, enzyme activities (alkaline phosphatase (AP), creatine kinase (CK), lactate dehydrogenase (LDH), and γ-glutamyl-transferase (GGT)), and total DNA methylation as training features for a set of machine learning (ML) models designed to enhance the predictive capacity of sperm parameters. Samples were classified based on their progressive motility and DNA methylation features, exhibiting significant differences in total and progressive motility, curvilinear velocity (VCL), velocity of the average path (VAP), linear velocity (VSL), amplitude of lateral head displacement (ALH), beat-cross frequency (BCF), and live normal sperm cells in favour of fast motility ones. Additionally, there were significant differences in enzyme activities for AP and CK, with correlations to LDH and GGT levels. Although motility showed no correlation with total DNA methylation, ALH, wobble of the curvilinear trajectory (WOB), and VCL were significantly different in the newly introduced classification for "suggested good quality", where both motility and methylation were high. The performance differences observed while training various ML classifiers using different feature subsets highlight the importance of DNA methylation for achieving more accurate sample quality classification, even though there is no correlation between motility and DNA methylation. The parameters ALH, VCL, triton extracted LDH, and VAP were top-ranking for "suggested good quality" predictions by the neural network and gradient boosting models. In conclusion, integrating non-kinetic parameters into machine-learning-based sample classification offers a promising approach for selecting kinetically and morphologically superior duck sperm samples that might otherwise be hindered by a predominance of lowly methylated cells.
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Affiliation(s)
- Desislava Abadjieva
- Department of Immunoneuroendocrinology, Institute of Biology and Immunology of Reproduction, Bulgarian Academy of Sciences, Bul. Tzarigradsko Shosse 73, 1113 Sofia, Bulgaria
| | - Boyko Georgiev
- Department of Immunoneuroendocrinology, Institute of Biology and Immunology of Reproduction, Bulgarian Academy of Sciences, Bul. Tzarigradsko Shosse 73, 1113 Sofia, Bulgaria
| | - Vasko Gerzilov
- Department of Animal Science, Agricultural University, 12, Mendeleev Str., 4000 Plovdiv, Bulgaria
| | - Ilka Tsvetkova
- Reproductive OMICS Laboratory, Institute of Biology and Immunology of Reproduction, Bulgarian Academy of Sciences, Bul. Tzarigradsko Shosse 73, 1113 Sofia, Bulgaria
| | - Paulina Taushanova
- Department of Immunoneuroendocrinology, Institute of Biology and Immunology of Reproduction, Bulgarian Academy of Sciences, Bul. Tzarigradsko Shosse 73, 1113 Sofia, Bulgaria
| | - Krassimira Todorova
- Reproductive OMICS Laboratory, Institute of Biology and Immunology of Reproduction, Bulgarian Academy of Sciences, Bul. Tzarigradsko Shosse 73, 1113 Sofia, Bulgaria
| | - Soren Hayrabedyan
- Reproductive OMICS Laboratory, Institute of Biology and Immunology of Reproduction, Bulgarian Academy of Sciences, Bul. Tzarigradsko Shosse 73, 1113 Sofia, Bulgaria
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Valkova E, Atanasov V, Vlaykova T, Tacheva T, Zhelyazkova Y, Dimov D, Yakimov K. The Serum Levels of the Heavy Metals Cu, Zn, Cd, and Pb and Progression of COPD-A Preliminary Study. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2023; 20:1427. [PMID: 36674183 PMCID: PMC9858954 DOI: 10.3390/ijerph20021427] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 01/06/2023] [Accepted: 01/11/2023] [Indexed: 06/17/2023]
Abstract
There is evidence in previous studies that high levels of heavy metals may play a key role in the development of COPD due to the induction of chronic inflammation and oxidative stress. In this preliminary study, we used atomic absorption spectrophotometry to measure the levels of four heavy metals (Cu, Zn, Cd, and Pb) in blood serum of COPD patients and controls over 2 years. Clinical data on disease progression or absence were collected in patients living in the industrial region of Stara Zagora, Bulgaria. The mean values of Cu in the serum of patients with COPD and the control group were 374.29 ± 15.03 μg/L and 238.55 ± 175.31 μg/L, Zn—2010.435 ± 670.006 μg/L and 1672.78 ± 934.27 μg/L, Cd—0.334 ± 0.0216 μg/L and 0.395 ± 0.110 μg/L and Pb—0.0732 ± 0.009 μg/L and 0.075 ± 0.0153 μg/L. This is probably because these elements are biogenic and are used in the body for its anti-oxidant protection. In fact, it cannot be stated with certainty that elevated levels of Cu and Zn in the environment have a negative impact in COPD patients. There was a trend towards higher levels of the toxicants lead and cadmium in COPD patients compared to the control group of patients. There is a statistically unproven trend toward higher levels of lead and cadmium in COPD patients compared to controls, which to some extent supports our hypothesis that there is a relationship between environmental lead and cadmium levels and the COPD manifested. In COPD patients, a positive correlation was found between BMI and serum Cu levels (r = 0.413, p = 0.005). A higher concentration of serum Cu was found in men with BMI ≥ 30, compared to those with BMI < 30. There is also a positive correlation to a lesser extent between CRP and cadmium (r = 0.380; p = 0.019) and lead (r = 0.452; p = 0.004). The correlation of lead and cadmium with PSA also shows that these elements may also be associated with the presence of inflammatory processes. A significant negative correlation exists between Pb in the serum of patients with COPD and their blood hemoglobin (r = −356; p = 0.028). The results of our study suggest that higher doses of the trace elements Cu and Zn do not always have a negative effect in patients with COPD, while the toxicants Pb and Cd may be involved in COPD exacerbation and can be used as prognostic biomarkers for progression. Further studies are warranted to confirm these preliminary results.
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Affiliation(s)
- Elica Valkova
- Department of Biological Sciences, Agriculture Faculty, Trakia University, 6000 Stara Zagora, Bulgaria
| | - Vasil Atanasov
- Department of Biological Sciences, Agriculture Faculty, Trakia University, 6000 Stara Zagora, Bulgaria
| | - Tatyana Vlaykova
- Department of Medical Chemistry and Biochemistry, Medical Faculty, Trakia University, 6000 Stara Zagora, Bulgaria
- Department of Medical Biochemistry, Medical University of Plovdiv, 4002 Plovdiv, Bulgaria
| | - Tanya Tacheva
- Department of Medical Chemistry and Biochemistry, Medical Faculty, Trakia University, 6000 Stara Zagora, Bulgaria
| | - Yanitsa Zhelyazkova
- Department of Medical Chemistry and Biochemistry, Medical Faculty, Trakia University, 6000 Stara Zagora, Bulgaria
| | - Dimo Dimov
- Department of Medical Chemistry and Biochemistry, Medical Faculty, Trakia University, 6000 Stara Zagora, Bulgaria
| | - Kristian Yakimov
- Department of Biological Sciences, Agriculture Faculty, Trakia University, 6000 Stara Zagora, Bulgaria
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Gerzilov V, Alexandrova A, Andreeva M, Tsvetanova E, Georgieva A, Petrov P, Stefanov R. Effect of prooxidants and chelator Desferal on the oxidative status and sperm motility of Muscovy semen. Toxicol Rep 2022; 9:276-283. [PMID: 35256999 PMCID: PMC8897696 DOI: 10.1016/j.toxrep.2022.02.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Revised: 12/14/2021] [Accepted: 02/06/2022] [Indexed: 11/24/2022] Open
Abstract
This study aimed to establish the sensitivity of Muscovy duck semen to oxidative stress (OS) and the effect of Desferal, applied as an antioxidant. The effect of three prooxidant systems in presence and absence of Desferal were tested on the motility and kinetic parameters (determined using CASA system), as well as the level of lipid peroxidation (LPO) and glutathione (tGSH) of Muscovy semen. The semen was diluted (1:3 v/v) with four extenders (saline solution, IMV Canadyl, HIA-1, and AU) and stored at 4 °C for 6 h. The cooled semen was divided into aliquots (50 × 106 sperm cells/mL), which were incubated at 37 °C for 30 min with one of the following prooxidative agents: ferrous sulfate (FeSO4, 0.1 mM), hydrogen peroxide (H2O2, 1 mM), and Fenton system (FeSO4(Fe2+), 0.1 mM + H2O2, 1 mM), in the presence or absence of Desferal (0.1 mM). The addition of FeSO4 + H2O2 or FeSO4 regardless of the used extender, as well as the addition of H2O2 to the diluted semen with saline solution significantly increased the levels of LPO (P < 0.05). With the lowest prooxidant effect was H2O2. The application of Desferal reduced significantly (P < 0.05) the LPO levels induced by FeSO4 + H2O2 or FeSO4 and in a weaker degree by H2O2. Among all prooxidants, FeSO4 + H2O2 decreased in the greatest extent the tGSH concentration in semen diluted with each used extenders in comparison to the relevant control. The addition of Desferal in semen diluted with HIA-1 extender and incubated with FeSO4, and H2O2, showed the best restoration of tGSH level, close to that of respectively controls. The studied prooxidants significantly reduced total, progressive, and kinetic sperm motility (P < 0.05). Although the inclusion of Desferal reduced the sperm OS, it did not improve the impaired by OS sperm motility.
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Affiliation(s)
- Vasko Gerzilov
- Department of Animal Science, Agricultural University, 12, Mendeleev Str., Plovdiv, 4000, Bulgaria
| | - Albena Alexandrova
- Laboratory of Free Radical Processes, Institute of Neurobiology, Bulgarian Academy of Sciences, 23, Acad. G. Bonchev Str., Sofia, 1113, Bulgaria
- Department of Physiology and Biochemistry, National Sports Academy, 21, Acad. S. Mladenov Str., Sofia, 1700, Bulgaria
| | - Madlena Andreeva
- Laboratory of Free Radical Processes, Institute of Neurobiology, Bulgarian Academy of Sciences, 23, Acad. G. Bonchev Str., Sofia, 1113, Bulgaria
- Institute of Biology and Immunology of Reproduction "Acad. Kiril Bratanov", Bulgarian Academy of Sciences, 73, Tzarigradsko Shosse Blvd., Sofia, 1113, Bulgaria
| | - Elina Tsvetanova
- Laboratory of Free Radical Processes, Institute of Neurobiology, Bulgarian Academy of Sciences, 23, Acad. G. Bonchev Str., Sofia, 1113, Bulgaria
| | - Almira Georgieva
- Laboratory of Free Radical Processes, Institute of Neurobiology, Bulgarian Academy of Sciences, 23, Acad. G. Bonchev Str., Sofia, 1113, Bulgaria
| | - Petar Petrov
- Department of Animal Science, Agricultural University, 12, Mendeleev Str., Plovdiv, 4000, Bulgaria
| | - Rossen Stefanov
- Institute of Biology and Immunology of Reproduction "Acad. Kiril Bratanov", Bulgarian Academy of Sciences, 73, Tzarigradsko Shosse Blvd., Sofia, 1113, Bulgaria
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Łukaszewicz E, Jerysz A, Chełmońska B. Effect of semen extenders and storage time on quality of Muscovy duck (Cairina moschata) drake semen during the entire reproductive season. Reprod Domest Anim 2020; 55:943-950. [PMID: 32452061 DOI: 10.1111/rda.13731] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Revised: 05/12/2020] [Accepted: 05/19/2020] [Indexed: 11/27/2022]
Abstract
Avian semen dilution with appropriate extender allows to prolong the fertilizing ability of sperm stored in vitro. In the present study, the impact of extenders and time of storage on morphology of Muscovy duck (Cairina moschata) drake semen were examined. Semen was collected twice a week, using male stimulation by a female method, from 12 adults (29 weeks old) drakes kept individually in cages, under controlled environmental conditions. Freshly collected, pooled ejaculates were divided into three part: neat undiluted sample, and diluted 1:1 with Schramm (SCH) or Watanabe (W) extender and stored at 4°C. Morphological examination of all samples was conducted after dilution and then, after 3 and 6 hr of storage. The storage of undiluted semen caused decrease (p ≤ .01) in live morphologically normal sperm, from 79.73% in the freshly collected ejaculates to 55.75% and to 12.12% after 3 and 6 hr of storage, respectively (average calculated for the entire reproductive season). In the semen diluted with Schramm's extender the adequate values attained 86.84, 79.65 and 61.66%, and using Watanabe extender 84.77, 83.58 and 75.25%, respectively. The period of semen storage and the type of extender caused significant (p ≤ 0,05; p ≤ 0,01) changes in sperm morphology. The longer period of storage contributed to the decrease in number of morphologically normal sperm, whereas their content in Watanabe extender after 3 and 6 hr of storage was higher (p ≤ .01) than in semen diluted in Schramm extender.
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Affiliation(s)
- Ewa Łukaszewicz
- Division of Poultry Breeding, Institute of Animal Breeding, Wroclaw University of Environmental and Life Sciences, Wroclaw, Poland
| | - Anna Jerysz
- Division of Poultry Breeding, Institute of Animal Breeding, Wroclaw University of Environmental and Life Sciences, Wroclaw, Poland
| | - Bronisława Chełmońska
- Division of Poultry Breeding, Institute of Animal Breeding, Wroclaw University of Environmental and Life Sciences, Wroclaw, Poland
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Ostrich specific semen diluent and sperm motility characteristics during in vitro storage. Anim Reprod Sci 2018; 193:107-116. [DOI: 10.1016/j.anireprosci.2018.04.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2018] [Revised: 03/17/2018] [Accepted: 04/05/2018] [Indexed: 02/06/2023]
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Mineral profiling of ostrich (Struthio camelus) seminal plasma and its relationship with semen traits and collection day. Anim Reprod Sci 2018; 193:98-106. [PMID: 29653829 DOI: 10.1016/j.anireprosci.2018.04.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2018] [Revised: 03/17/2018] [Accepted: 04/05/2018] [Indexed: 11/24/2022]
Abstract
Successful assisted reproduction techniques, with specific focus on in vitro semen storage for artificial insemination, are dependent on certain key elements which includes the biochemical profiling of semen. The objective of this study was to complete an ostrich seminal plasma (SP) evaluation by inductively coupled plasma mass spectrometry (ICP-MS) among seven males at different daily intervals (day 1, 3, 7, 11, 15, 19, 21, 23, 25, 26, 27, 28) for a period of 28 days during spring (August to September) for mineral profiling. The effect of collection day and male on sperm concentration, semen volume and seminal plasma volume, was explored as well as the relationships amongst these specific sperm traits and SP minerals. Variation amongst SP mineral concentrations, accounted for by the fixed effects of sperm concentration, semen volume, seminal plasma volume, collection day and male, ranged from 18% to 77%. Male had the largest effect on variation in SP minerals, namely: phosphorus (P), potassium (K), calcium (Ca), sodium (Na), boron (B), iron (Fe), cobalt (Co), nickel (Ni), copper (Cu), molybdenum (Mo), barium (Ba), arsenic (As) and selenium (Se). Sperm concentration instigated fluctuations of P, magnesium (Mg), B, zinc (Zn), Fe, aluminium (Al), Se, manganese (Mn) and lead (Pb). Semen volume had an effect on Na, K, B, Pb and Ba while seminal plasma volume only influenced variation in Na. There were fluctuations among collection days of specific micro minerals, Ni and Mo, with initial Ni concentrations being relatively greater and Mo at lesser concentrations. Semen volume, seminal plasma volume and sperm concentration varied amongst males. Sperm concentrations during the initial collection days, 1 and 3, were less than that for days 7 to 28. Significant variation of SP minerals and sperm characteristics among ejaculates and males suggest an association of these specific elements with sperm function and are, therefore, considered to be of potential importance to success of assisted reproduction technology for the ostrich. The relationship amongst sperm concentration and collection day confirms the need to conduct an initial period of collection to stabilise a greater sperm concentration to optimise sperm numbers for artificial insemination purposes.
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