Risk assessment for precise intervention of COVID-19 epidemic based on available big data and spatio-temporal simulation method: Empirical evidence from different public places in Guangzhou, China

Evolution of COVID-19 dynamics in Guangdong Province, China: an endemic-epidemic modeling study

BACKGROUND

From January 2020 to June 2022, strict interventions against COVID-19 were implemented in Guangdong Province, China. However, the evolution of COVID-19 dynamics remained unclear in this period.

OBJECTIVES

This study aims to investigate the evolution of within- and between-city COVID-19 dynamics in Guangdong, specifically during the implementation of rigorous prevention and control measures. The intent is to glean valuable lessons that can be applied to refine and optimize targeted interventions for future crises.

METHODS

Data of COVID-19 cases and synchronous interventions from January 2020 to June 2022 in Guangdong Province were collected. The epidemiological characteristics were described, and the effective reproduction number (Rt) was estimated using a sequential Bayesian method. Endemic-epidemic multivariate time-series model was employed to quantitatively analyze the spatiotemporal component values and variations, to identify the evolution of within- and between-city COVID-19 dynamics.

RESULTS

The incidence of COVID-19 in Guangdong Province was 12.6/100,000 population (15,989 cases) from January 2020 to June 2022. The Rt predominantly remained below 1 and increased to a peak of 1.39 in Stage 5. As for the evolution of variations during the study period, there were more spatiotemporal components in stage 1 and 5. All components were fewer from Stage 2 to Stage 4. Results from the endemic-epidemic multivariate time-series model revealed a strong follow-up impact from previous infections in Dongguan, Guangzhou and Zhanjiang, with autoregressive components of 0.48, 0.45 and 0.36, respectively. Local risk was relatively high in Yunfu, Shanwei and Shenzhen, with endemic components of 1.17, 1.04 and 0.71, respectively. The impact of the epidemic on the neighboring regions was significant in Zhanjiang, Shenzhen and Zhuhai, with epidemic components of 2.14, 1.92, and 1.89, respectively.

CONCLUSION

The findings indicate the presence of spatiotemporal variation of COVID-19 in Guangdong Province, even with the implementation of strict interventions. It's significant to prevent transmissions within cities with dense population. Preventing spatial transmissions between cities is necessary when the epidemic is severe. To better cope with future crises, interventions including vaccination, medical resource allocation and coordinated non-pharmaceutical interventions were suggested.

A data-driven framework to assess population dynamics during novel coronavirus outbreaks: A case study on Xiamen Island, China

The outbreak of the Coronavirus Disease 2019 (COVID-19) has profoundly influenced daily life, necessitating the understanding of the relationship between the epidemic's progression and population dynamics. In this study, we present a data-driven framework that integrates GIS-based data mining technology and a Susceptible, Exposed, Infected and Recovered (SEIR) model. This approach helps delineate population dynamics at the grid and community scales and analyze the impacts of government policies, urban functional areas, and intercity flows on population dynamics during the pandemic. Xiamen Island was selected as a case study to validate the effectiveness of the data-driven framework. The results of the high/low cluster analysis provide 99% certainty (P < 0.01) that the population distribution between January 23 and March 16, 2020, was not random, a phenomenon referred to as high-value clustering. The SEIR model predicts that a ten-day delay in implementing a lockdown policy during an epidemic can lead to a significant increase in the number of individuals infected by the virus. Throughout the epidemic prevention and control period (January 23 to February 21, 2020), residential and transportation areas housed more residents. After the resumption of regular activities, the population was mainly concentrated in residential, industrial, and transportation, as well as road facility areas. Notably, the migration patterns into and out of Xiamen were primarily centered on neighboring cities both before and after the outbreak. However, migration indices from cities outside the affected province drastically decreased and approached zero following the COVID-19 outbreak. Our findings offer new insights into the interplay between the epidemic's development and population dynamics, which enhances the prevention and control of the coronavirus epidemic.

COVID-19 modeling based on real geographic and population data

BACKGROUND

: Intercity travel is one of the most important parameters for combating a pandemic. The ongoing COVID-19 pandemic has resulted in different computational studies involving intercity connections. In this study, the effects of intercity connections during an epidemic such as COVID-19 are evaluated using a new network model.

METHODS

This model considers the actual geographic neighborhood and population density data. This new model is applied to actual Turkish data by means of provincial connections and populations. A Monte Carlo algorithm with a hybrid lattice model is applied to a lattice with 8802 data points.

RESULTS

Around Monte Carlo step 70, the number of active cases in Türkiye reaches up to 8.0% of the total population, which is followed by a second wave at around Monte Carlo step 100. The number of active cases vanishes around Monte Carlo step 160. Starting with İstanbul, the epidemic quickly expands between steps 60 and 100. Simulation results fit the actual mortality data in Türkiye.

DISCUSSION

This model is quantitatively very efficient in modeling real-world COVID-19 epidemic data based on populations and geographical intercity connections, by means of estimating the number of deaths, disease spread, and epidemic termination.

Assessment of Regional Health Resource Carrying Capacity and Security in Public Health Emergencies Based on the COVID-19 Outbreak

The Omicron variant of COVID-19, which emerged at the end of 2021, has caused a new wave of infections around the world and is causing a new wave of the crisis due to the extreme variability of the pathogen. In response to public health emergencies such as SARS and COVID-19, the first task is to identify the vulnerabilities of regional health systems and perform a comprehensive assessment of the region's resilience. In this paper, we take the carrying capacity of medical resources as the focus; evaluate the medical, human, and financial resources of various regions; and construct an epidemic safety index based on the actual situation or future trend of the epidemic outbreak to evaluate and predict the risk level of each region in response to the epidemic. The study firstly evaluates the epidemic safety index for each province and city in China and 150 countries around the world, using the first wave of the COVID-19 epidemic in 2020 and the Omicron variant virus in 2022 as the background, respectively, and justifies the index through the actual performance in terms of epidemic prevention and control, based on which the epidemic safety index for 150 countries in the next year is predicted. The conclusions show that Europe, the Americas, and parts of Asia will face a significant risk of epidemic shocks in the coming period and that countries need to formulate policies in response to the actual situation of the epidemic.

Agent Simulation Model of COVID-19 Epidemic Agent-Based on GIS: A Case Study of Huangpu District, Shanghai

Since the COVID-19 outbreak was detected and reported at the end of 2019, the pandemic continues worldwide, with public health authorities and the general public in each country struggling to balance safety and normal travel activities. However, the complex public health environment and the complexity of human behaviors, as well as the constant mutation of the COVID-19 virus, requires the development of theoretical and simulation tools to accurately model all segments of society. In this paper, an agent-based model is proposed, the model constructs the real geographical environment of Shanghai Huangpu District based on the building statistics data of Shanghai Huangpu District, and the real population data of Shanghai Huangpu District based on the data of China's seventh Population census in 2020. After incorporating the detailed elements of COVID-19 transmission and the real data of WHO, the model forms various impact parameters. Finally, the model was validated according to the COVID-19 data reported by the official, and the model is applied to a hypothetical scenario. Shanghai is one of the places hardest hit by the current outbreak, Huangpu District is the "heart, window and name card" of Shanghai, and its importance to Shanghai is self-evident. so we used one-to-one population modeling to simulate the spread of COVID-19 in Huangpu District of Shanghai, In addition to the conventional functions of crowd movement, detection and treatment, the model also takes into account the burden of nucleic acid detection on the model caused by diseases similar to COVID-19, such as seasonal cold. The model validation results show that we have constructed a COVID-19 epidemic agent risk assessment system suitable for the individual epidemiological characteristics of COVID-19 in China, which can adjust and reflect on the existing COVID-19 epidemic intervention strategies and individual health behaviors. To provide scientific theoretical basis and information decision-making tools for effective prevention and control of COVID-19 and public health intervention in China.