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Pohuliai S, Kanapelka M, Lupilov A. Comparison of MCC-MT and EffMAKER software packages for in SITU field measurements with Monte Carlo simulations. Appl Radiat Isot 2023; 199:110901. [PMID: 37364424 DOI: 10.1016/j.apradiso.2023.110901] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 06/13/2023] [Accepted: 06/13/2023] [Indexed: 06/28/2023]
Abstract
This work is devoted to comparing the Monte Carlo simulation tools: Monte Carlo Calculation-Multi Track (MCC-MT) software and EffMaker software, in terms of the efficiency when using them in field applications for measurement of radioactive waste or their free release from control. The detection efficiency of volumetric gamma sources' reference samples in the form of a metal cylinder, a rod, and a rod placed in a 200-L barrel with sand, in the energy range of 50-1500 keV, has been simulated. Comparison of simulation results with in-situ measurements by a mobile HPGe spectrometer showed that the discrepancy between calculation and experiment for all measurement geometries is larger for EffMaker, which is associated with a less accurate detector model than in MCC-MT. Both programs give acceptable results in terms of accuracy and are recommended for calibrating gamma spectrometers in the case of field measurements.
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Affiliation(s)
- S Pohuliai
- Baltic Scientific Instruments, Riga, Latvia.
| | | | - A Lupilov
- Baltic Scientific Instruments, Riga, Latvia
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Crozet M, Rivier C, Lourenço V, Demeyer S. New approaches for interlaboratory comparisons analysis using dark uncertainty applied to radioactive materials. Talanta 2022; 250:123394. [DOI: 10.1016/j.talanta.2022.123394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 03/15/2022] [Accepted: 03/16/2022] [Indexed: 10/18/2022]
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Peyres V, Marijuán MJ, Šuráň J, Šolc J, Kovář P, Skála L, Grísa T, Gómez Caloca C, Saez Vergara JC. Validation of a free release measurement facility on a decommissioning site. Appl Radiat Isot 2021; 178:109968. [PMID: 34619627 DOI: 10.1016/j.apradiso.2021.109968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Accepted: 09/26/2021] [Indexed: 11/30/2022]
Abstract
The paper summarizes measurements and the Monte Carlo simulations performed to adapt the high purity germanium (HPGe) detectors of the system to the particular tasks of the decommissioning site. The work carried out for the installation and adaptation in CIEMAT of the prototype 'SuperMum', developed in the framework of the European MetroDecom II project for segregation and declassification of materials is described. The activities related to the validation of the prototype for the specific needs of a real Waste Management Unit are presented. Monte Carlo models of the SuperMum have been developed at CIEMAT and CMI using different codes and adapted to the geometries used (big-bag containers with the material volume of up to 0.5 m3). Uncertainty budget reporting tailored for the possible deviations between Monte Carlo assumptions and real waste have been analyzed. Data for several filling levels and activity distributions have been measured with reference sources and a good agreement has been obtained with calculated values.
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Affiliation(s)
- V Peyres
- CIEMAT, Avenida Complutense 40, Madrid, 28040, Spain.
| | - M J Marijuán
- CIEMAT, Avenida Complutense 40, Madrid, 28040, Spain
| | - J Šuráň
- CMI, Okruzni 31, 638 00, Brno, Czech Republic
| | - J Šolc
- CMI, Okruzni 31, 638 00, Brno, Czech Republic
| | - P Kovář
- CMI, Okruzni 31, 638 00, Brno, Czech Republic
| | - L Skála
- Nuvia, Modrinova 1094, 674 01, Trebic, Czech Republic
| | - T Grísa
- Nuvia, Modrinova 1094, 674 01, Trebic, Czech Republic
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Benoni R, Krafcikova P, Baranowski MR, Kowalska J, Boura E, Cahová H. Substrate Specificity of SARS-CoV-2 Nsp10-Nsp16 Methyltransferase. Viruses 2021; 13:v13091722. [PMID: 34578302 PMCID: PMC8472550 DOI: 10.3390/v13091722] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Revised: 08/20/2021] [Accepted: 08/21/2021] [Indexed: 01/18/2023] Open
Abstract
The ongoing COVID-19 pandemic exemplifies the general need to better understand viral infections. The positive single-strand RNA genome of its causative agent, the SARS coronavirus 2 (SARS-CoV-2), encodes all viral enzymes. In this work, we focused on one particular methyltransferase (MTase), nsp16, which, in complex with nsp10, is capable of methylating the first nucleotide of a capped RNA strand at the 2′-O position. This process is part of a viral capping system and is crucial for viral evasion of the innate immune reaction. In light of recently discovered non-canonical RNA caps, we tested various dinucleoside polyphosphate-capped RNAs as substrates for nsp10-nsp16 MTase. We developed an LC-MS-based method and discovered four types of capped RNA (m7Gp3A(G)- and Gp3A(G)-RNA) that are substrates of the nsp10-nsp16 MTase. Our technique is an alternative to the classical isotope labelling approach for the measurement of 2′-O-MTase activity. Further, we determined the IC50 value of sinefungin to illustrate the use of our approach for inhibitor screening. In the future, this approach may be an alternative technique to the radioactive labelling method for screening inhibitors of any type of 2′-O-MTase.
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Affiliation(s)
- Roberto Benoni
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, 16610 Prague, Czech Republic; (R.B.); (P.K.)
| | - Petra Krafcikova
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, 16610 Prague, Czech Republic; (R.B.); (P.K.)
| | - Marek R. Baranowski
- Division of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Ludwika Pasteura 5, 02-093 Warsaw, Poland; (M.R.B.); (J.K.)
| | - Joanna Kowalska
- Division of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Ludwika Pasteura 5, 02-093 Warsaw, Poland; (M.R.B.); (J.K.)
| | - Evzen Boura
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, 16610 Prague, Czech Republic; (R.B.); (P.K.)
- Correspondence: (E.B.); (H.C.)
| | - Hana Cahová
- Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, 16610 Prague, Czech Republic; (R.B.); (P.K.)
- Correspondence: (E.B.); (H.C.)
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Suran J, Kovar P, Smoldasova J, Solc J, Van Ammel R, Garcia Miranda M, Russell B, Arnold D, Zapata-García D, Boden S, Rogiers B, Sand J, Peräjärvi K, Holm P, Hay B, Failleau G, Plumeri S, Laurent Beck Y, Grisa T. Metrology for decommissioning nuclear facilities: Partial outcomes of joint research project within the European Metrology Research Program. Appl Radiat Isot 2017; 134:351-357. [PMID: 28899615 DOI: 10.1016/j.apradiso.2017.08.032] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2017] [Revised: 08/30/2017] [Accepted: 08/30/2017] [Indexed: 10/18/2022]
Abstract
Decommissioning of nuclear facilities incurs high costs regarding the accurate characterisation and correct disposal of the decommissioned materials. Therefore, there is a need for the implementation of new and traceable measurement technologies to select the appropriate release or disposal route of radioactive wastes. This paper addresses some of the innovative outcomes of the project "Metrology for Decommissioning Nuclear Facilities" related to mapping of contamination inside nuclear facilities, waste clearance measurement, Raman distributed temperature sensing for long term repository integrity monitoring and validation of radiochemical procedures.
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Affiliation(s)
- Jiri Suran
- Czech Metrology Institute, Okruzni 31, 638 00 Brno, Czech Republic.
| | - Petr Kovar
- Czech Metrology Institute, Okruzni 31, 638 00 Brno, Czech Republic
| | - Jana Smoldasova
- Czech Metrology Institute, Okruzni 31, 638 00 Brno, Czech Republic
| | - Jaroslav Solc
- Czech Metrology Institute, Okruzni 31, 638 00 Brno, Czech Republic
| | - Raf Van Ammel
- European Commission, Joint Research Centre (JRC), Directorate for Nuclear Safety and Security, Retieseweg 111, 2440 Geel, Belgium
| | | | - Ben Russell
- National Physical Laboratory, Hampton Road, TW11 0LW Teddington, United Kingdom
| | - Dirk Arnold
- Physikalisch-Technische Bundesanstalt, Bundesallee 100, 38116 Braunschweig, Germany
| | - Daniel Zapata-García
- Physikalisch-Technische Bundesanstalt, Bundesallee 100, 38116 Braunschweig, Germany
| | - Sven Boden
- Studiecentrum Voor Kernenergie, Boeretang 200, BE-2400 MOL, Belgium
| | - Bart Rogiers
- Studiecentrum Voor Kernenergie, Boeretang 200, BE-2400 MOL, Belgium
| | - Johan Sand
- Sateilyturvakeskus, Laippatie 4, P.O. Box 14, 00881 Helsinki, Finland
| | - Kari Peräjärvi
- Sateilyturvakeskus, Laippatie 4, P.O. Box 14, 00881 Helsinki, Finland
| | - Philip Holm
- Sateilyturvakeskus, Laippatie 4, P.O. Box 14, 00881 Helsinki, Finland
| | - Bruno Hay
- Laboratoire National de Métrologie et d´essais, Avenue Roger Hennequin 29, 78197 Trappes, France
| | - Guillaume Failleau
- Laboratoire National de Métrologie et d´essais, Avenue Roger Hennequin 29, 78197 Trappes, France
| | - Stephane Plumeri
- Agence Nationale Pour la Gestion des Dechets Radioactifs, Rue Jean Monnet 1/7, 92 298 Chatenay-Malabry Cedex, France
| | - Yves Laurent Beck
- Electricite de France S.A., Avenue de Wagram 22-30, 75008 Paris, France
| | - Tomas Grisa
- NUVIA a.s., Modrinova 1094, 67401 Trebic, Czech Republic
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