From spoken narratives to domain knowledge: mining linguistic data for medical image understanding

Predicting pregnancy test results after embryo transfer by image feature extraction and analysis using machine learning

Assessing the viability of a blastosyst is still empirical and non-reproducible nowadays. We developed an algorithm based on artificial vision and machine learning (and other classifiers) that predicts pregnancy using the beta human chorionic gonadotropin (b-hCG) test from both the morphology of an embryo and the age of the patients. We employed two high-quality databases with known pregnancy outcomes (n = 221). We created a system consisting of different classifiers that is feed with novel morphometric features extracted from the digital micrographs, along with other non-morphometric data to predict pregnancy. It was evaluated using five different classifiers: probabilistic bayesian, Support Vector Machines (SVM), deep neural network, decision tree, and Random Forest (RF), using a k-fold cross validation to assess the model's generalization capabilities. In the database A, the SVM classifier achieved an F1 score of 0.74, and AUC of 0.77. In the database B the RF classifier obtained a F1 score of 0.71, and AUC of 0.75. Our results suggest that the system is able to predict a positive pregnancy test from a single digital image, offering a novel approach with the advantages of using a small database, being highly adaptable to different laboratory settings, and easy integration into clinical practice.

Using Machine Learning to Assess Physician Competence: A Systematic Review

PURPOSE

To identify the different machine learning (ML) techniques that have been applied to automate physician competence assessment and evaluate how these techniques can be used to assess different competence domains in several medical specialties.

METHOD

In May 2017, MEDLINE, EMBASE, PsycINFO, Web of Science, ACM Digital Library, IEEE Xplore Digital Library, PROSPERO, and Cochrane Database of Systematic Reviews were searched for articles published from inception to April 30, 2017. Studies were included if they applied at least one ML technique to assess medical students', residents', fellows', or attending physicians' competence. Information on sample size, participants, study setting and design, medical specialty, ML techniques, competence domains, outcomes, and methodological quality was extracted. MERSQI was used to evaluate quality, and a qualitative narrative synthesis of the medical specialties, ML techniques, and competence domains was conducted.

RESULTS

Of 4,953 initial articles, 69 met inclusion criteria. General surgery (24; 34.8%) and radiology (15; 21.7%) were the most studied specialties; natural language processing (24; 34.8%), support vector machine (15; 21.7%), and hidden Markov models (14; 20.3%) were the ML techniques most often applied; and patient care (63; 91.3%) and medical knowledge (45; 65.2%) were the most assessed competence domains.

CONCLUSIONS

A growing number of studies have attempted to apply ML techniques to physician competence assessment. Although many studies have investigated the feasibility of certain techniques, more validation research is needed. The use of ML techniques may have the potential to integrate and analyze pragmatic information that could be used in real-time assessments and interventions.

Intelligent medical image grouping through interactive learning

Image grouping in knowledge-rich domains is challenging, since domain knowledge and human expertise are key to transform image pixels into meaningful content. Manually marking and annotating images is not only labor-intensive but also ineffective. Furthermore, most traditional machine learning approaches cannot bridge this gap for the absence of experts' input. We thus present an interactive machine learning paradigm that allows experts to become an integral part of the learning process. This paradigm is designed for automatically computing and quantifying interpretable grouping of dermatological images. In this way, the computational evolution of an image grouping model, its visualization, and expert interactions form a loop to improve image grouping. In our paradigm, dermatologists encode their domain knowledge about the medical images by grouping a small subset of images via a carefully designed interface. Our learning algorithm automatically incorporates these manually specified connections as constraints for reorganizing the whole image dataset. Performance evaluation shows that this paradigm effectively improves image grouping based on expert knowledge.