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For: Fedorova AV, Chan IS, Shin JA. The GCN4 bZIP can bind to noncognate gene regulatory sequences. Biochim Biophys Acta 2006;1764:1252-9. [PMID: 16784907 PMCID: PMC2600801 DOI: 10.1016/j.bbapap.2006.04.009] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 01/31/2006] [Revised: 04/10/2006] [Accepted: 04/17/2006] [Indexed: 12/27/2022]
Number Cited by Other Article(s)
1
Kamagata K, Murata A, Itoh Y, Takahashi S. Characterization of facilitated diffusion of tumor suppressor p53 along DNA using single-molecule fluorescence imaging. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS 2017. [DOI: 10.1016/j.jphotochemrev.2017.01.004] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
2
Yao Z, Delorme-Axford E, Backues SK, Klionsky DJ. Atg41/Icy2 regulates autophagosome formation. Autophagy 2016;11:2288-99. [PMID: 26565778 DOI: 10.1080/15548627.2015.1107692] [Citation(s) in RCA: 68] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
3
Banerjee A, Herman E, Serif M, Maestre-Reyna M, Hepp S, Pokorny R, Kroth PG, Essen LO, Kottke T. Allosteric communication between DNA-binding and light-responsive domains of diatom class I aureochromes. Nucleic Acids Res 2016;44:5957-70. [PMID: 27179025 PMCID: PMC4937327 DOI: 10.1093/nar/gkw420] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Accepted: 05/04/2016] [Indexed: 12/20/2022]  Open
4
Sánchez MI, Vázquez O, Vázquez ME, Mascareñas JL. Sequence-selective DNA recognition with peptide-bisbenzamidine conjugates. Chemistry 2013;19:9923-9. [PMID: 23780839 DOI: 10.1002/chem.201300519] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2013] [Indexed: 12/15/2022]
5
Basic leucine zipper transcription factor Hac1 binds DNA in two distinct modes as revealed by microfluidic analyses. Proc Natl Acad Sci U S A 2012;109:E3084-93. [PMID: 23054834 DOI: 10.1073/pnas.1212457109] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]  Open
6
Chan IS, Al-Sarraj T, Shahravan SH, Fedorova AV, Shin JA. The bZIP dimer localizes at DNA full-sites where each basic region can alternately translocate and bind to subsites at the half-site. Biochemistry 2012;51:6632-43. [PMID: 22856882 DOI: 10.1021/bi300718f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
7
Shahravan SH, Li ITS, Truong K, Shin JA. FRep: A Fluorescent Protein-Based Bioprobe for in Vivo Detection of Protein–DNA Interactions. Anal Chem 2011;83:9643-50. [DOI: 10.1021/ac2024602] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
8
Chan IS, Shahravan SH, Fedorova AV, Shin JA. The bZIP targets overlapping DNA subsites within a half-site, resulting in increased binding affinities. Biochemistry 2008;47:9646-52. [PMID: 18702507 PMCID: PMC2633644 DOI: 10.1021/bi800355t] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
9
Seong KM, Park H, Kim SJ, Ha HN, Lee JY, Kim J. A new method for the construction of a mutant library with a predictable occurrence rate using Poisson distribution. J Microbiol Methods 2007;69:442-50. [PMID: 17428560 DOI: 10.1016/j.mimet.2007.02.010] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2006] [Revised: 02/15/2007] [Accepted: 02/19/2007] [Indexed: 11/24/2022]
10
Chan IS, Fedorova AV, Shin JA. The GCN4 bZIP targets noncognate gene regulatory sequences: quantitative investigation of binding at full and half sites. Biochemistry 2007;46:1663-71. [PMID: 17279629 PMCID: PMC2435288 DOI: 10.1021/bi0617613] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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