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Singh S, Nara R, Yadav M, Sharma C, Agrawal S, Kumar A. Oil palm biomass: a potential feedstock for lignocellulolytic enzymes and biofuels production. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2025; 32:11791-11814. [PMID: 40234315 DOI: 10.1007/s11356-025-36379-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Accepted: 04/02/2025] [Indexed: 04/17/2025]
Abstract
The availability of low-cost feedstocks for the production of lignocellulolytic enzymes and bioenergy products is a major challenge for biofuel industry. Oil palm processing generates huge amount of residual biomass that can be utilized for cost-effective production of lignocellulolytic enzymes and second-generation biofuels. The cultivation of oil palm and extraction of oil generates residues in the form of oil palm empty fruit bunches, oil palm frond, and oil palm trunk that are rich source of cellulose and hemicelluloses. The integration of these oil palm-based residues to circular economy mitigates wastes disposal problems and provides clean energy. Oil palm biomass has also been proved as cost-effective substrates for the production enzymes under solid-state and submerged fermentation especially using fungi. The rapidly increasing global renewable energy demand requires the potential sources. The oil palm biomass can be suitable resource for generation of renewable energy. The conversion of oil palm biomass into biofuels requires efficient, cost-effective, and environmentally friendly pretreatment. Physical, chemical, and biological pretreatments and their combinations have been employed to remove lignin and to enhance the digestibility of carbohydrates available in oil palm-based residues. The advancement in pretreatment technologies and enzymatic hydrolysis resulted in release of maximum amount of sugars for biofuels production. This paper investigates the recent research progress on valorization of oil palm-based residues into cellulases, xylanases, ligninolytic enzymes, bioethanol, biobutanol, biomethane, bio-oil, and xylitol.
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Affiliation(s)
- Shivam Singh
- Department of Biotechnology, Sharda School of Engineering and Technology, Sharda University, Greater Noida, India
| | - Rachna Nara
- Department of Bio-Sciences and Technology, MMEC, Maharishi Markandeshwar (Deemed to be University), Mullana-Ambala, Haryana, India
| | - Mukesh Yadav
- Department of Bio-Sciences and Technology, MMEC, Maharishi Markandeshwar (Deemed to be University), Mullana-Ambala, Haryana, India
| | - Chhavi Sharma
- University Centre for Research and Development (UCRD), University Institute of Biotechnology, Chandigarh University, Mohali, Punjab, India
| | - Sharad Agrawal
- Department of Life Sciences, SBSR, Sharda University, Greater Noida, UP, India
| | - Amit Kumar
- Department of Biotechnology, Sharda School of Engineering and Technology, Sharda University, Greater Noida, India.
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Infante-Neta AA, de Carvalho ÁAO, D'Almeida AP, Gonçalves LRB, de Albuquerque TL. Xylitol production from passion fruit peel hydrolysate: Optimization of hydrolysis and fermentation processes. BIORESOURCE TECHNOLOGY 2024; 414:131628. [PMID: 39396579 DOI: 10.1016/j.biortech.2024.131628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 09/06/2024] [Accepted: 10/10/2024] [Indexed: 10/15/2024]
Abstract
The passion fruit peel (PFP) has a high cellulose and hemicellulose content, which can be used to produce fermentable sugars. In this context, this study aims to optimize the release of xylose and the production of xylitol from PFP. The optimized conditions were 0.71 M dilute sulfuric acid and a 21.84-minute treatment, yielding 19.03 g/L of xylose (PFP-1). Different PFP hydrolysates were evaluated to improve xylitol production by the yeast Kluyveromyces marxianus ATCC 36907: PFP-2 (PFP1 treated with Ca(OH)2), PFP-3 (PFP-1 treated with Ca(OH)2 and activated carbon), PFP-4 (PFP-3 with biological elimination of glucose with S. cerevisiae, and concentrated at different xylose concentrations). The applied methods resulted in higher xylitol production (14.97 g/L), when PFP hydrolysate was detoxified with Ca(OH)2, treated with activated charcoal for 1 h, biotreated for glucose removal, and concentrated to 40 g/L of xylose.
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Affiliation(s)
- Aida Aguilera Infante-Neta
- Federal University of Ceará, Department of Food Engineering, Center for Agricultural Sciences, Fortaleza, CE 60020-181, Brazil
| | | | - Alan Portal D'Almeida
- Federal University of Ceará, Department of Chemical Engineering, Technology Center, Fortaleza, CE 60455-760, Brazil
| | | | - Tiago Lima de Albuquerque
- Federal University of Ceará, Department of Food Engineering, Center for Agricultural Sciences, Fortaleza, CE 60020-181, Brazil.
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Rüllke M, Schönrock V, Schmitz K, Oreb M, Tamayo E, Benz JP. Engineering of Aspergillus niger for efficient production of D-xylitol from L-arabinose. Microb Cell Fact 2024; 23:262. [PMID: 39367393 PMCID: PMC11452932 DOI: 10.1186/s12934-024-02526-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2024] [Accepted: 09/11/2024] [Indexed: 10/06/2024] Open
Abstract
D-Xylitol is a naturally occurring sugar alcohol present in diverse plants that is used as an alternative sweetener based on a sweetness similar to sucrose and several health benefits compared to conventional sugar. However, current industrial methods for D-xylitol production are based on chemical hydrogenation of D-xylose, which is energy-intensive and environmentally harmful. However, efficient conversion of L-arabinose as an additional highly abundant pentose in lignocellulosic materials holds great potential to broaden the range of applicable feedstocks. Both pentoses D-xylose and L-arabinose are converted to D-xylitol as a common metabolic intermediate in the native fungal pentose catabolism.To engineer a strain capable of accumulating D-xylitol from arabinan-rich agricultural residues, pentose catabolism was stopped in the ascomycete filamentous fungus Aspergillus niger at the stage of D-xylitol by knocking out three genes encoding enzymes involved in D-xylitol degradation (ΔxdhA, ΔsdhA, ΔxkiA). Additionally, to facilitate its secretion into the medium, an aquaglyceroporin from Saccharomyces cerevisiae was tested. In S. cerevisiae, Fps1 is known to passively transport glycerol and is regulated to convey osmotic stress tolerance but also exhibits the ability to transport other polyols such as D-xylitol. Thus, a constitutively open version of this transporter was introduced into A. niger, controlled by multiple promoters with varying expression strengths. The strain expressing the transporter under control of the PtvdA promoter in the background of the pentose catabolism-deficient triple knock-out yielded the most favorable outcome, producing up to 45% D-xylitol from L-arabinose in culture supernatants, while displaying minimal side effects during osmotic stress. Due to its additional ability to extract D-xylose and L-arabinose from lignocellulosic material via the production of highly active pectinases and hemicellulases, A. niger emerges as an ideal candidate cell factory for D-xylitol production from lignocellulosic biomasses rich in both pentoses.In summary, we are showing for the first time an efficient biosynthesis of D-xylitol from L-arabinose utilizing a filamentous ascomycete fungus. This broadens the potential resources to include also arabinan-rich agricultural waste streams like sugar beet pulp and could thus help to make alternative sweetener production more environmentally friendly and cost-effective.
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Affiliation(s)
- Marcel Rüllke
- Fungal Biotechnology in Wood Science, Holzforschung München, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany
| | - Veronika Schönrock
- Fungal Biotechnology in Wood Science, Holzforschung München, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany
| | - Kevin Schmitz
- Fungal Biotechnology in Wood Science, Holzforschung München, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany
| | - Mislav Oreb
- Faculty of Biological Sciences, Institute of Molecular Biosciences, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany
| | - Elisabeth Tamayo
- Fungal Biotechnology in Wood Science, Holzforschung München, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany
| | - J Philipp Benz
- Fungal Biotechnology in Wood Science, Holzforschung München, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany.
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Mueller A, Xu L, Heine C, Flach T, Mäkelä MR, de Vries RP. Genome Mining Reveals a Surprising Number of Sugar Reductases in Aspergillus niger. J Fungi (Basel) 2023; 9:1138. [PMID: 38132739 PMCID: PMC10744612 DOI: 10.3390/jof9121138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 11/21/2023] [Accepted: 11/22/2023] [Indexed: 12/23/2023] Open
Abstract
Metabolic engineering of filamentous fungi has received increasing attention in recent years, especially in the context of creating better industrial fungal cell factories to produce a wide range of valuable enzymes and metabolites from plant biomass. Recent studies into the pentose catabolic pathway (PCP) in Aspergillus niger have revealed functional redundancy in most of the pathway steps. In this study, a closer examination of the A. niger genome revealed five additional paralogs for the three original pentose reductases (LarA, XyrA, XyrB). Analysis of these genes using phylogeny, in vitro and in vivo functional analysis of the enzymes, and gene expression revealed that all can functionally replace LarA, XyrA, and XyrB. However, they are also active on several other sugars, suggesting a role for them in other pathways. This study therefore reveals the diversity of primary carbon metabolism in fungi, suggesting an intricate evolutionary process that distinguishes different species. In addition, through this study, the metabolic toolkit for synthetic biology and metabolic engineering of A. niger and other fungal cell factories has been expanded.
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Affiliation(s)
- Astrid Mueller
- Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; (A.M.); (L.X.); (C.H.); (T.F.)
| | - Li Xu
- Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; (A.M.); (L.X.); (C.H.); (T.F.)
| | - Claudia Heine
- Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; (A.M.); (L.X.); (C.H.); (T.F.)
| | - Tila Flach
- Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; (A.M.); (L.X.); (C.H.); (T.F.)
| | - Miia R. Mäkelä
- Department of Microbiology, University of Helsinki, Viikinkaari 9, 00014 Helsinki, Finland;
| | - Ronald P. de Vries
- Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; (A.M.); (L.X.); (C.H.); (T.F.)
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Ying W, Li X, Lian Z, Xu Y, Zhang J. An integrated process using acetic acid hydrolysis and deep eutectic solvent pretreatment for xylooligosaccharides and monosaccharides production from wheat bran. BIORESOURCE TECHNOLOGY 2022; 363:127966. [PMID: 36113818 DOI: 10.1016/j.biortech.2022.127966] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 09/08/2022] [Accepted: 09/09/2022] [Indexed: 06/15/2023]
Abstract
Organic acid hydrolysis for xylooligosaccharides (XOS) production from lignocelluloses provides the benefits of simple operation, rapid reaction and high XOS yield. However, no literature reported the XOS production from wheat bran (WB) by organic acid hydrolysis. In this paper, acetic acid (AA) hydrolysis was employed to produce XOS from WB. After AA hydrolysis (5 %, v/v, 170 °C, 20 min) of 100 g/L WB, the concentrations of X2, X3, X4, X5 and X6 were 2.4, 5.0, 1.9, 1.9 and 1.4 g/L respectively and the total XOS yield was 62.9 %, which was the highest among the previous researches. The arabinose yield reached 76.1 %. Then, AA-hydrolyzed WB was delignified by deep eutectic solvent (DES) pretreatment and the resulting residue had the glucose and xylose yields of 83.8 % and 54.8 %, respectively. This work offers a productive method for the conversion of WB into XOS, arabinose and glucose by AA hydrolysis and DES pretreatment.
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Affiliation(s)
- Wenjun Ying
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, China
| | - Xudong Li
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, China
| | - Zhina Lian
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Forestry Genetics & Biotechnology (Nanjing Forestry University), Ministry of Education, Nanjing 210037, China
| | - Yong Xu
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Forestry Genetics & Biotechnology (Nanjing Forestry University), Ministry of Education, Nanjing 210037, China
| | - Junhua Zhang
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, China; Key Laboratory of Forestry Genetics & Biotechnology (Nanjing Forestry University), Ministry of Education, Nanjing 210037, China.
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Saha BC, Kennedy GJ, Bowman MJ, Qureshi N, Nichols NN. Itaconic acid production by Aspergillus terreus from glucose up to pilot scale and from corn stover and wheat straw hydrolysates using new manganese tolerant medium. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2022. [DOI: 10.1016/j.bcab.2022.102418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Xylitol Production by Candida Species from Hydrolysates of Agricultural Residues and Grasses. FERMENTATION-BASEL 2021. [DOI: 10.3390/fermentation7040243] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Xylitol is an industrially important chemical due to its commercial applications. The use of xylitol as a sweetener as well as its utilization in biomedical applications has made it a high value specialty chemical. Although several species of yeast synthesize xylitol, this review focusses on the species of the genus Candida. The importance of the enzyme xylitol reductase present in Candida species as it relates to their ability to synthesize xylitol was examined. Another focus of this work was to review prior studies examining the ability of the Candida species to synthesize xylitol effectively from hydrolysates of agricultural residues and grasses. An advantage of utilizing such a hydrolysate as a substrate for yeast xylitol production would be decreasing the overall cost of synthesizing xylitol. The intent of this review was to learn if such hydrolysates could substitute for xylose as a substrate for the yeast when producing xylitol. In addition, a comparison of xylitol production by Candida species should indicate which hydrolysate of agricultural residues and grasses would be the best substrate for xylitol production. From studies analyzing previous hydrolysates of agricultural residues and grasses, it was concluded that a hydrolysate of sugarcane bagasse supported the highest level of xylitol by Candida species, although corncob hydrolysates also supported significant yeast xylitol production. It was also concluded that fewer studies examined yeast xylitol production on hydrolysates of grasses and that further research on grasses may provide hydrolysates with a higher xylose content, which could support greater yeast xylitol production.
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Saha BC, Kennedy GJ. Optimization of xylitol production from xylose by a novel arabitol limited co-producing Barnettozyma populi NRRL Y-12728. Prep Biochem Biotechnol 2020; 51:761-768. [PMID: 33305654 DOI: 10.1080/10826068.2020.1855443] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
Xylitol is a widely marketed sweetener with good functionality and health-promoting properties. It can be synthetized by many yeast species in a one-step reduction of xylose. Arabinose is a common contaminant found in xylose and there is ongoing interest in finding biocatalysts that selectively produce xyltiol. From a screen of 99 yeasts, Barnettozyma populi Y-12728 was found to selectively produce xylitol from both mixed sugars and corn stover hemicellulosic hydrolysate. Here, fermentation conditions for xylitol production from xylose by B. populi were optimized. The medium for xylitol production was optimized through response surface methodology. The yeast produced 31.2 ± 0.4 g xylitol from xylose (50 g L-1) in 62 h using the optimized medium. The optimal pH for xylitol production was 6.0. Glucose (10 g L-1), acetic acid (6.0 g L-1), HMF (4 mM) and ethanol (2.0 g L-1) inhibited the xylitol production. The glucose inhibition was entirely mitigated by using a 2-stage aeration strategy, indicating that the yeast was inhibited by ethanol produced from glucose under low aeration. This culture strategy will greatly benefit xylitol production from hemicellulosic hydrolysates, which often contain glucose. This is the first report on optimization of xylitol production by a Barnettozyma species.
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Affiliation(s)
- Badal C Saha
- Bioenergy Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, U. S. Department of Agriculture, Peoria, IL, USA
| | - Gregory J Kennedy
- Bioenergy Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, U. S. Department of Agriculture, Peoria, IL, USA
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