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Wang W, Zhang X, Li M, Liu X, Yang K, Tuovinen OH, Wang H. Ecological adaptation of antimony-oxidizing bacteria (SbOB) drives habitat-specific bioremediation potential. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2025:126529. [PMID: 40425065 DOI: 10.1016/j.envpol.2025.126529] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2025] [Revised: 05/06/2025] [Accepted: 05/23/2025] [Indexed: 05/29/2025]
Abstract
Antimony-oxidizing bacteria (SbOB) play vital roles in Sb detoxification, yet their environmental adaptation mechanisms remain unclear. Through comparative analysis of Sb-contaminated groundwater and soil ecosystems in Xikuangshan mining area, we revealed striking habitat-driven divergence in SbOB survival strategies, focusing on community diversity, ribosomal RNA operon (rrn) copies, niche breadth, and gene profiles. Results showed that SbOB markedly enhanced α-diversity in groundwater but minimally affected soil communities. Taxonomically, Hydrogenophaga, Pseudomonas, and Aeromonas prevailed in groundwater, whereas Acidobacteria, Chloroflexi, and Gemmatimonadaceae dominated soil ecosystems. Genomic traits revealed groundwater SbOB uniquely linked Sb oxidation (aioA) and metabolic pathways for sulfur oxidation (soxB), CO2 fixation (cbbL), and N2 fixation (nifH), enabling versatile energy acquisition. These taxa demonstrated rapid responses to fluctuating organic inputs via higher rrn copies, expanding their niche through autotrophy. Additionally, oxidative stress tolerance genes enabled them to thrive under oxygen fluctuations in groundwater. Conversely, soil SbOB with lower rrn copies prioritized antibiotic resistance for niche competition. These findings establish a habitat-specific framework for Sb bioremediation. Groundwater SbOB consortia, with their multifunctional metabolic toolkit, are prime candidates for engineering bioaugmentation systems to simultaneously detoxify Sb(III) and mitigate co-contaminants (e.g., sulfides, nitrate) in mining-impacted aquifers.
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Affiliation(s)
- Weiqi Wang
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China; Innovation Center of Yangtze River Delta, Zhejiang University, Jiashan, 314100, China; Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China
| | - Xinyue Zhang
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China
| | - Min Li
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China
| | - Xiaoyan Liu
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China
| | - Kang Yang
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China
| | - Olli H Tuovinen
- Department of Microbiology, Ohio State University, Columbus, 43210, USA
| | - Hongmei Wang
- School of Environmental Studies, China University of Geosciences, Wuhan, 430074, China; State Key Laboratory of Geomicrobiology and Environmental Change,China University of Geosciences, Wuhan, 430074, China.
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2
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Huang D, Sun X, Ghani MU, Li B, Yang J, Chen Z, Kong T, Xiao E, Liu H, Wang Q, Sun W. Bacteria associated with Comamonadaceae are key arsenite oxidizer associated with Pteris vittata root. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 349:123909. [PMID: 38582183 DOI: 10.1016/j.envpol.2024.123909] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 03/27/2024] [Accepted: 03/29/2024] [Indexed: 04/08/2024]
Abstract
Pteris vittata (P. vittata), an arsenic (As) hyperaccumulator commonly used in the phytoremediation of As-contaminated soils, contains root-associated bacteria (RAB) including those that colonize the root rhizosphere and endosphere, which can adapt to As contamination and improve plant health. As(III)-oxidizing RAB can convert the more toxic arsenite (As(III)) to less toxic arsenate (As(V)) under As-rich conditions, which may promote plant survial. Previous studies have shown that microbial As(III) oxidation occurs in the rhizospheres and endospheres of P. vittata. However, knowledge of RAB of P. vittata responsible for As(III) oxidation remained limited. In this study, members of the Comamonadaceae family were identified as putative As(III) oxidizers, and the core microbiome associated with P. vittata roots using DNA-stable isotope probing (SIP), amplicon sequencing and metagenomic analysis. Metagenomic binning revealed that metagenome assembled genomes (MAGs) associated with Comamonadaceae contained several functional genes related to carbon fixation, arsenic resistance, plant growth promotion and bacterial colonization. As(III) oxidation and plant growth promotion may be key features of RAB in promoting P. vittata growth. These results extend the current knowledge of the diversity of As(III)-oxidizing RAB and provide new insights into improving the efficiency of arsenic phytoremediation.
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Affiliation(s)
- Duanyi Huang
- College of Environmental Science and Engineering, Hunan University, Changsha 410082, China; Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha 410082, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Xiaoxu Sun
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Muhammad Usman Ghani
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China; Institute of Soil and Environmental Sciences, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Baoqin Li
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Jinchan Yang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China; School of Environment, Henan Normal University, Xinxiang 453007, China
| | - Zhenyu Chen
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China; School of Environment, Henan Normal University, Xinxiang 453007, China
| | - Tianle Kong
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China; College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Enzong Xiao
- Key Laboratory of Water Quality and Conservation in the Pearl River Delta, Ministry of Education, School of Environmental Science and Engineering, Guangzhou University, Guangzhou 510006, China
| | - Huaqing Liu
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Qi Wang
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China
| | - Weimin Sun
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China.
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3
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Han R, Wang Z, Wang S, Sun G, Xiao Z, Hao Y, Nriagu J, Teng HH, Li G. A combined strategy to mitigate the accumulation of arsenic and cadmium in rice (Oryza sativa L.). THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 896:165226. [PMID: 37392888 DOI: 10.1016/j.scitotenv.2023.165226] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 06/12/2023] [Accepted: 06/28/2023] [Indexed: 07/03/2023]
Abstract
Arsenic and cadmium in rice grain are of growing concern in the global food supply chain. Paradoxically, the two elements have contrasting behaviors in soils, making it difficult to develop a strategy that can concurrently reduce their uptake and accumulation by rice plant. This study examined the combined impacts of watering (irrigation) schemes, different fertilizers and microbial populations on the bioaccumulation of arsenic and cadmium by rice as well as on rice grain yield. Compared to drain-flood and flood-drain treatments, continuously flooded condition significantly reduced the accumulation of cadmium in rice plant but the level of arsenic in rice grain remained above 0.2 mg/kg, which exceeded the China national food safety standard. Application of different fertilizers under continuously flooded condition showed that compared to inorganic fertilizer and biochar, manure addition effectively reduced the accumulation of arsenic over three to four times in rice grain and both elements were below the food safety standard (0.2 mg/kg) while significantly increasing the rice yield. Soil Eh was the critical factor in the bioavailability of cadmium, while the behavior of arsenic in rhizosphere was associated with the iron cycle. The results of the multi-parametric experiments can be used as a roadmap for low-cost and in-situ approach for producing safe rice without compromising the yield.
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Affiliation(s)
- Ruixia Han
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China
| | - Zhe Wang
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China
| | - Shuqing Wang
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China
| | - Guoxin Sun
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Zufei Xiao
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China
| | - Yilong Hao
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China
| | - Jerome Nriagu
- Department of Environmental Health Sciences, School of Public Health, University of Michigan, 109 Observatory Street, Ann Arbor, MI 48109-2029, USA
| | - H Henry Teng
- Institute of Surface-Earth System Science, School of Earth System Science, Tianjin University, Tianjin 300072, China
| | - Gang Li
- Key Laboratory of Urban Environment and Health, Ningbo Urban Environment Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, CAS Haixi Industrial Technology Innovation Center in Beilun, Ningbo 315830, China.
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4
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Jiang O, Li L, Duan G, Gustave W, Zhai W, Zou L, An X, Tang X, Xu J. Root exudates increased arsenic mobility and altered microbial community in paddy soils. J Environ Sci (China) 2023; 127:410-420. [PMID: 36522072 DOI: 10.1016/j.jes.2022.05.036] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Revised: 05/23/2022] [Accepted: 05/24/2022] [Indexed: 06/17/2023]
Abstract
Root exudates are crucial for plants returning organic matter to soils, which is assumed to be a major source of carbon for the soil microbial community. This study investigated the influence of root exudates on the fate of arsenic (As) with a lab simulation experiment. Our findings suggested that root exudates had a dose effect on the soil physicochemical properties, As speciation transformation and the microbial community structure at different concentrations. The addition of root exudates increased the soil pH while decreased the soil redox potential (Eh). These changes in the soil pH and Eh increased As and ferrous (Fe(II)) concentrations in soil porewater. Results showed that 40 mg/L exudates addition significantly increased arsenite (As(III)) and arsenate (As(V)) by 541 and 10 times respectively within 30 days in soil porewater. The relative abundance of Fe(III)-reducing bacteria Geobacter and Anaeromyxobacter increased with the addition of root exudates, which enhanced microbial Fe reduction. Together these results suggest that investigating how root exudates affect the mobility and transformation of As in paddy soils is helpful to systematically understand the biogeochemical cycle of As in soil-rice system, which is of great significance for reducing the health risk of soil As contamination.
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Affiliation(s)
- Ouyuan Jiang
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Lvyao Li
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Guilan Duan
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Williamson Gustave
- School of Chemistry, Environmental & Life Sciences, University of The Bahamas, New Providence, Nassau, Bahamas
| | - Weiwei Zhai
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Lina Zou
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China; Zhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Research, Flower Research and Development Centre, Zhejiang Academy of Agricultural Sciences, Hangzhou 311202, China.
| | - Xia An
- Zhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Research, Flower Research and Development Centre, Zhejiang Academy of Agricultural Sciences, Hangzhou 311202, China
| | - Xianjin Tang
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Jianming Xu
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
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5
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Lalinská-Voleková B, Majerová H, Kautmanová I, Brachtýr O, Szabóová D, Arendt D, Brčeková J, Šottník P. Hydrous ferric oxides (HFO's) precipitated from contaminated waters at several abandoned Sb deposits - Interdisciplinary assessment. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 821:153248. [PMID: 35051450 DOI: 10.1016/j.scitotenv.2022.153248] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 01/14/2022] [Accepted: 01/14/2022] [Indexed: 06/14/2023]
Abstract
The presented paper represents a comprehensive analysis of ochre sediments precipitated from Fe rich drainage waters contaminated by arsenic and antimony. Ochre samples from three abandoned Sb deposits were collected in three different seasons and were characterized from the mineralogical, geochemical, and microbiological point of view. They were formed mainly by poorly crystallized 2-line ferrihydrite, with the content of arsenic in samples ranging from 7 g·kg-1 to 130 g·kg-1 and content of antimony ranging from 0.25 g·kg-1 up to 12 g·kg-1. Next-generation sequencing approach with 16S RNA, 18S RNA and ITS markers was used to characterize bacterial, fungal, algal, metazoal and protozoal communities occurring in the HFOs. In the 16S RNA, the analysis dominated bacteria (96.2%) were mainly Proteobacteria (68.8%) and Bacteroidetes (10.2%) and to less extent also Acidobacteria, Actinobacteria, Cyanobacteria, Firmicutes, Nitrosprae and Chloroflexi. Alpha and beta diversity analysis revealed that the bacterial communities of individual sites do not differ significantly, and only subtle seasonal changes were observed. In this As and Sb rich, circumneutral microenvironment, rich in iron, sulfates and carbonates, methylotrophic bacteria (Methylobacter, Methylotenera), metal/reducing bacteria (Geobacter, Rhodoferax), metal-oxidizing and denitrifying bacteria (Gallionella, Azospira, Sphingopyxis, Leptothrix and Dechloromonas), sulfur-oxidizing bacteria (Sulfuricurvum, Desulphobulbaceae) and nitrifying bacteria (Nitrospira, Nitrosospira) accounted for the most dominant ecological groups and their impact over Fe, As, Sb, sulfur and nitrogen geocycles is discussed. This study provides evidence of diverse microbial communities that exist in drainage waters and are highly important in the process of mobilization or immobilization of the potentially toxic elements.
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Affiliation(s)
| | - Hana Majerová
- Hana Majerová, Cancer Research Institute, Department of Tumor Immunology, Biomedical Research Center, Slovak Academy of Sciences, Dubravska cesta 9, 84505 Bratislava, Slovakia
| | - Ivona Kautmanová
- SNM-Natural History Museum, Vajanského náb. 2, P.O. BOX 13, 810 06 Bratislava, Slovakia
| | - Ondrej Brachtýr
- Comenius University in Bratislava, Faculty of Natural Sciences, Department of Mineralogy, Petrology and Economic Geology, Ilkovičova 6, 842 15 Bratislava, Slovakia
| | - Dana Szabóová
- SNM-Natural History Museum, Vajanského náb. 2, P.O. BOX 13, 810 06 Bratislava, Slovakia
| | - Darina Arendt
- SNM-Natural History Museum, Vajanského náb. 2, P.O. BOX 13, 810 06 Bratislava, Slovakia
| | - Jana Brčeková
- Comenius University in Bratislava, Faculty of Natural Sciences, Department of Mineralogy, Petrology and Economic Geology, Ilkovičova 6, 842 15 Bratislava, Slovakia
| | - Peter Šottník
- Comenius University in Bratislava, Faculty of Natural Sciences, Department of Mineralogy, Petrology and Economic Geology, Ilkovičova 6, 842 15 Bratislava, Slovakia
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Deng J, Xiao T, Fan W, Ning Z, Xiao E. Relevance of the microbial community to Sb and As biogeochemical cycling in natural wetlands. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 818:151826. [PMID: 34822895 DOI: 10.1016/j.scitotenv.2021.151826] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 11/07/2021] [Accepted: 11/16/2021] [Indexed: 06/13/2023]
Abstract
Mining activities lead to elevated levels of antimony (Sb) and arsenic (As) in river systems, having adverse effects on the aquatic environment and human health. Microbes inhabiting river sediment can mediate the transformation of Sb and As, thus changing the toxicity and mobility of Sb and As. Compared to river sediments, natural wetlands could introduce distinct geochemical conditions, leading to the formation of different sedimentary microbial compositions between river sediments and wetland sediments. However, whether such changes in microbial composition could influence the microbially mediated geochemical behavior of Sb or As remains poorly understood. In this study, we collected samples from a river contaminated by Sb tailings and a downstream natural wetland to study the influence of microorganisms on the geochemical behavior of Sb and As after the Sb/As-contaminated river entered the natural wetland. We found that the microbial compositions in the natural wetland soil differed from those in the river sediment. The Sb/As contaminant components (Sb(III), As(III), As(V), Asexe) and nutrients (TC) were important determinants of the difference in the compositions of the microbial communities in the two environments. Taxonomic groups were differentially enriched between the river sediment and wetland soil. For example, the taxonomic groups Xanthomonadales, Clostridiales and Desulfuromonadales were important in the wetland and were likely to involve in Sb/As reduction, sulfate reduction and Fe(III) reduction, whereas Burkholderiales, Desulfobacterales, Hydrogenophilales and Rhodocyclales were important taxonomic groups in the river sediments and were reported to involve in Sb/As oxidation and sulfide oxidation. Our results suggest that microorganisms in both river sediments and natural wetlands can affect the geochemical behavior of Sb/As, but the mechanisms of action are different.
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Affiliation(s)
- Jinmei Deng
- Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, School of Environmental Science and Engineering, Guangzhou University, Guangzhou 510006, China
| | - Tangfu Xiao
- Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, School of Environmental Science and Engineering, Guangzhou University, Guangzhou 510006, China; State Key Laboratory of Geohazard Prevention and Geoenvironment Protection, Chengdu University of Technology, Chengdu 610059, China
| | - Wenjun Fan
- Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, School of Environmental Science and Engineering, Guangzhou University, Guangzhou 510006, China
| | - Zengping Ning
- State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, Guiyang 550081, China
| | - Enzong Xiao
- Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, School of Environmental Science and Engineering, Guangzhou University, Guangzhou 510006, China.
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7
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Xu Y, Li H, Zeng XC. A novel biofilm bioreactor derived from a consortium of acidophilic arsenite-oxidizing bacteria for the cleaning up of arsenite from acid mine drainage. ECOTOXICOLOGY (LONDON, ENGLAND) 2021; 30:1437-1445. [PMID: 33040243 DOI: 10.1007/s10646-020-02283-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 09/26/2020] [Indexed: 06/11/2023]
Abstract
Arsenite (As(III)) was considered to be of great concern in acid mine drainage (AMD). A promising approach for cleaning up of arsenite from AMD is microbial oxidation of As(III) followed by adsorptions. However, there is virtually no research about the acidophilic bioreactor for As(III) oxidation so far. In this study, we formed a new biofilm bioreactor with a consortium of acidophilic As(III) oxidation bacteria. It is totally chemoautotrophic, with no need to add any carbon or other materials during the operations. It works well under pH 3.0-4.0, capable of oxidizing 1.0-20.0 mg/L As(III) in 3.0-4.5 h, respectively. A continuous operation of the bioreactor suggests that it is very stable and sustainable. Functional gene detection indicated that the biofilms possessed a unique diversity of As(III) oxidase genes. Taken together, this acidophilic bioreactor has great potential for industrial applications in the cleaning up of As(III) from AMD solution.
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Affiliation(s)
- Yifan Xu
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), 430074, Wuhan, People's Republic of China
| | - Hao Li
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), 430074, Wuhan, People's Republic of China
| | - Xian-Chun Zeng
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), 430074, Wuhan, People's Republic of China.
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8
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Maity JP, Chen CY, Bhattacharya P, Sharma RK, Ahmad A, Patnaik S, Bundschuh J. Advanced application of nano-technological and biological processes as well as mitigation options for arsenic removal. JOURNAL OF HAZARDOUS MATERIALS 2021; 405:123885. [PMID: 33183836 DOI: 10.1016/j.jhazmat.2020.123885] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 08/19/2020] [Accepted: 08/30/2020] [Indexed: 05/04/2023]
Abstract
Arsenic (As) removal is a huge challenge, since several million people are potentially exposed (>10 μg/L World Health Organization guideline limit) through As contaminated drinking water worldwide. Review attempts to address the present situation of As removal, considering key topics on nano-technological and biological process and current progress and future perspectives of possible mitigation options have been evaluated. Different physical, chemical and biological methods are available to remove As from contaminated water/soil/wastes, where removal efficiency mainly depends on absorbent type, initial adsorbate concentration, speciation and interfering species. Oxidation is an important pretreatment step in As removal, which is generally achieved by several media such as O2/O3, HClO, KMnO4 and H2O2. The Fe-based-nanomaterials (α/β/γ-FeOOH, Fe2O3/Fe3O4-γ-Fe2O3), Fe-based-composite-compounds, activated-Al2O3, HFO, Fe-Al2O3, Fe2O3-impregnated-graphene-aerogel, iron-doped-TiO2, aerogel-based- CeTiO2, and iron-oxide-coated-manganese are effective to remove As from contaminated water. Biological processes (phytoremediation/microbiological) are effective and ecofriendly for As removal from water and/or soil environment. Microorganisms remove As from water, sediments and soil by metabolism, detoxification, oxidation-reduction, bio-adsorption, bio-precipitation, and volatilization processes. Ecofriendly As mitigation options can be achieved by utilizing an alternative As-safe-aquifer, surface-water or rainwater-harvesting. Application of hybrid (biological with chemical and physical process) and Best-Available-Technologies (BAT) can be the most effective As removal strategy to remediate As contaminated environments.
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Affiliation(s)
- Jyoti Prakash Maity
- Department of Earth and Environmental Sciences, Center for Innovative Research on Aging Society, AIM-HI, National Chung Cheng University, 168 University Road, Min- Hsiung, Chiayi County 62102, Taiwan; School of Applied Science, KIIT University, Bhubaneswar, 751024, India
| | - Chien-Yen Chen
- Department of Earth and Environmental Sciences, Center for Innovative Research on Aging Society, AIM-HI, National Chung Cheng University, 168 University Road, Min- Hsiung, Chiayi County 62102, Taiwan.
| | - Prosun Bhattacharya
- KTH-International Groundwater Arsenic Research Group, Department of Sustainable Development, Environmental Science and Engineering, KTH Royal Institute of Technology, Teknikringen 76, SE-100 44 Stockholm, Sweden; UNESCO Chair on Groundwater Arsenic Within the 2030 Agenda for Sustainable Development, University of Southern Queensland (USQ), West Street, Toowoomba, QLD 4350, Australia
| | - Raju Kumar Sharma
- Department of Earth and Environmental Sciences, Center for Innovative Research on Aging Society, AIM-HI, National Chung Cheng University, 168 University Road, Min- Hsiung, Chiayi County 62102, Taiwan; Department of Chemistry and Biochemistry, National Chung Cheng University, 168 University Road, Min-Hsiung, Chiayi County 62102, Taiwan
| | - Arslan Ahmad
- KTH-International Groundwater Arsenic Research Group, Department of Sustainable Development, Environmental Science and Engineering, KTH Royal Institute of Technology, Teknikringen 76, SE-100 44 Stockholm, Sweden; KWR Water Research Institute, Groningenhaven 7 3433 PE Nieuwegein, The Netherlands; Department of Environmental Technology, Wageningen University and Research (WUR), Wageningen, The Netherlands; SIBELCO Ankerpoort NV, Op de Bos 300, 6223 EP Maastricht, The Netherlands
| | - Sneha Patnaik
- School of Public Health, KIMS Medical College, KIIT University, Bhubaneswar, 751024, India
| | - Jochen Bundschuh
- UNESCO Chair on Groundwater Arsenic Within the 2030 Agenda for Sustainable Development, University of Southern Queensland (USQ), West Street, Toowoomba, QLD 4350, Australia.
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9
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Li B, Xu R, Sun X, Han F, Xiao E, Chen L, Qiu L, Sun W. Microbiome-environment interactions in antimony-contaminated rice paddies and the correlation of core microbiome with arsenic and antimony contamination. CHEMOSPHERE 2021; 263:128227. [PMID: 33297183 DOI: 10.1016/j.chemosphere.2020.128227] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/25/2019] [Revised: 07/20/2020] [Accepted: 08/31/2020] [Indexed: 05/21/2023]
Abstract
Mining activities of antimony (Sb) and arsenic (As) typically result in severe environmental contamination. These contaminants accumulate in rice and thus threaten the health of local residents, who consume Sb- and As-enriched rice grains. Microorganisms play a critical role in the transformation and transportation of Sb and As in paddy soil. Thus, an understanding of the microbiology of contaminated sites would promote the production of safe agricultural products. In this study, six Sb- and As-contaminated rice fields near an active Sb-mining area were investigated. The Sb and As concentrations of all samples were elevated compared to the background level in China. Nitrate, total As, total Sb, and Fe(III) were the major determinants of the microbial community structure. Seven bacterial taxa (i.e. Bradyrhizobium, Bryobacter, Candidatus Solibacter, Geobacter, Gemmatimonas, Halingium, and Sphingomonas) were identified as the core microbiome. These taxa were strongly correlated with the As and Sb contaminant fractions and likely to metabolize As and Sb. Results imply that many soil microbes can survival in the Sb/As contaminated sites.
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Affiliation(s)
- Baoqin Li
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou, 510650, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou, 510650, China
| | - Rui Xu
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou, 510650, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou, 510650, China
| | - Xiaoxu Sun
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou, 510650, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou, 510650, China
| | - Feng Han
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou, 510650, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou, 510650, China
| | - Enzong Xiao
- Key Laboratory of Water Quality and Conservation in the Pearl River Delta, Ministry of Education, School of Environmental Science and Engineering, Guangzhou University, Guangzhou, 510006, China
| | - Lei Chen
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou, 510650, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou, 510650, China
| | - Lang Qiu
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou, 510650, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou, 510650, China
| | - Weimin Sun
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou, 510650, China; National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou, 510650, China.
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10
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Zhang M, Li Z, Häggblom MM, Young L, He Z, Li F, Xu R, Sun X, Sun W. Characterization of Nitrate-Dependent As(III)-Oxidizing Communities in Arsenic-Contaminated Soil and Investigation of Their Metabolic Potentials by the Combination of DNA-Stable Isotope Probing and Metagenomics. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:7366-7377. [PMID: 32436703 DOI: 10.1021/acs.est.0c01601] [Citation(s) in RCA: 71] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Arsenite (As(III)) oxidation has important environmental implications by decreasing both the mobility and toxicity of As in the environment. Microbe-mediated nitrate-dependent As(III) oxidation (NDAO) may be an important process for As(III) oxidation in anoxic environments. Our current knowledge of nitrate-dependent As(III)-oxidizing bacteria (NDAB), however, is largely based on isolates, and thus, the diversity of NDAB may be underestimated. In this study, DNA-stable isotope probing (SIP) with 13C-labeled NaHCO3 as the sole carbon source, amplicon sequencing, and shotgun metagenomics were combined to identify NDAB and investigate their NDAO metabolism. As(III) oxidation was observed in the treatment amended with nitrate, while no obvious As(III) oxidation was observed without nitrate addition. The increase in the gene copies of aioA in the nitrate-amended treatment suggested that As(III) oxidation was mediated by microorganisms containing the aioA genes. Furthermore, diverse putative NDAB were identified in the As-contaminated soil cultures, such as Azoarcus, Rhodanobacter, Pseudomonas, and Burkholderiales-related bacteria. Metagenomic analysis further indicated that most of these putative NDAB contained genes for As(III) oxidation and nitrate reduction, confirming their roles in NDAO. The identification of novel putative NDAB expands current knowledge regarding the diversity of NDAB. The current study also suggests the proof of concept of using DNA-SIP to identify the slow-growing NDAB.
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Affiliation(s)
- Miaomiao Zhang
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou 510650, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou 510650, China
| | - Zhe Li
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou 510650, China
- School of Chemistry and Environmental Engineering, Wuhan Institute of Technology, Wuhan 430205, China
| | - Max M Häggblom
- Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, New Jersey 08901, United States
| | - Lily Young
- Department of Environmental Sciences, The State University of New Jersey, New Brunswick, New Jersey 08901, United States
| | - Zijun He
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou 510650, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou 510650, China
| | - Fangbai Li
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou 510650, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou 510650, China
| | - Rui Xu
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou 510650, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou 510650, China
| | - Xiaoxu Sun
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou 510650, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou 510650, China
| | - Weimin Sun
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Guangdong Institute of Eco-environmental Science & Technology, Guangdong Academy of Sciences, Guangzhou 510650, China
- National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangzhou 510650, China
- Guangdong-Hong Kong-Macao Joint Laboratory for Environmental Pollution and Control, Guangzhou 510650, China
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11
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Chen X, Zeng XC, Kawa YK, Wu W, Zhu X, Ullah Z, Wang Y. Microbial reactions and environmental factors affecting the dissolution and release of arsenic in the severely contaminated soils under anaerobic or aerobic conditions. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 189:109946. [PMID: 31759742 DOI: 10.1016/j.ecoenv.2019.109946] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2019] [Revised: 11/05/2019] [Accepted: 11/10/2019] [Indexed: 06/10/2023]
Abstract
The soils near the abandoned Shimen Realgar Mine are characterized by containing extremely high contents of total and soluble arsenic. To determine the microbial reactions and environmental factors affecting the mobilization and release of arsenic from soils phase into pore water, we collected 24 soil samples from the representative points around the abandoned Shimen Realgar Mine. They contained 8310.84 mg/kg total arsenic and 703.21 mg/kg soluble arsenic in average. The soluble arsenic in the soils shows significant positive and negative correlations with environmental SO42-/TOC/pH/PO43-, and Fe/Mn, respectively. We found that diverse dissimilatory As(V)-respiring prokaryotes (DARPs) and As(III)-oxidizing bacteria (AOB) exist in all the examined soil samples. The activities of DARPs led to 65-1275% increase of soluble As(III) in the examined soils after 21.0 days of anaerobic incubation, and the microbial dissolution and releases of arsenic show significant positive and negative correlations with the environmental pH/TN and NH4+/PO43-, respectively. In comparison, the activities of AOB led to 24-346% inhibition of the dissolved oxygen-mediated dissolution of arsenic in the soils, and the AOB-mediated releases of As(V) show significant positive and negative correlations with the environmental SO42- and pH/NH4+, respectively. The microbial communities of 24 samples contain 54 phyla of bacteria that show extremely high diversities. Total arsenic, TOC, NO3- and pH are the key environmental factors that indirectly controlled the mobilization and release of arsenic via influencing the structures of the microbial communities in the soils. This work gained new insights into the mechanism for how microbial communities catalyze the dissolution and releases of arsenic from the soils with extremely high contents of arsenic.
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Affiliation(s)
- Xiaoming Chen
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan, People's Republic of China
| | - Xian-Chun Zeng
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan, People's Republic of China.
| | - Yahaya Kudush Kawa
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan, People's Republic of China
| | - Weiwei Wu
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan, People's Republic of China
| | - Xianbin Zhu
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan, People's Republic of China
| | - Zahid Ullah
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan, People's Republic of China
| | - Yanxin Wang
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan, People's Republic of China
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12
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Ngegla JV, Zhou X, Chen X, Zhu X, Liu Z, Feng J, Zeng XC. Unique diversity and functions of the arsenic-methylating microorganisms from the tailings of Shimen Realgar Mine. ECOTOXICOLOGY (LONDON, ENGLAND) 2020; 29:86-96. [PMID: 31832832 DOI: 10.1007/s10646-019-02144-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 01/25/2019] [Indexed: 05/27/2023]
Abstract
Microbial arsenic (As) methylation plays important roles in the As biogeochemical cycle. However, little is known about the diversity and functions of As-methylating microorganisms from the tailings of a Realgar Mine, which is characterized as containing extremely high concentrations of As. To address this issue, we collected five samples (T1-T5) from the tailings of Shimen Realgar Mine. Microcosm assays without addition of exogenous As and carbon indicated that all the five samples possess significant As-methylating activities, producing 0.8-5.7 μg/L DMAsV, and 1.1-10.7 μg/L MMAsV with an exception of T3, from which MMAsV was not detectable after 14.0 days of incubation. In comparison, addition of 20.0 mM lactate to the microcosms significantly enhanced the activities of these samples; the produced DMAsV and MMAsV are 8.0-39.7 μg/L and 5.8-38.3 μg/L, respectively. The biogenic DMAsV shows significant positive correlations with the Fe concentrations and negative correlations with the total nitrogen concentrations in the environment. A total of 63 different arsM genes were identified from the five samples, which code for new or new-type ArsM proteins, suggesting that a unique diversity of As-methylating microbes are present in the environment. The microbial community structures of the samples were significantly shaped by the environmental total organic carbon, total As contents and NO3- contents. These data help to better understand the microorganisms-catalyzed As methylation occurred in the environment with extremely high contents of As.
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Affiliation(s)
- Janet Victoria Ngegla
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences, Wuhan, PR China
| | - Xing Zhou
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences, Wuhan, PR China
| | - Xiaoming Chen
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences, Wuhan, PR China
| | - Xianbin Zhu
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences, Wuhan, PR China
| | - Ziwei Liu
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences, Wuhan, PR China
| | - Jilong Feng
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences, Wuhan, PR China
| | - Xian-Chun Zeng
- State Key Laboratory of Biogeology and Environmental Geology & School of Environmental Studies, China University of Geosciences, Wuhan, PR China.
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13
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Zeng XC, He Z, Chen X, Cao QAD, Li H, Wang Y. Effects of arsenic on the biofilm formations of arsenite-oxidizing bacteria. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2018; 165:1-10. [PMID: 30173020 DOI: 10.1016/j.ecoenv.2018.08.079] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Revised: 08/20/2018] [Accepted: 08/21/2018] [Indexed: 06/08/2023]
Abstract
Arsenite-oxidizing bacteria (AOB) play a key role in the biogeochemical cycle of arsenic in the environment, and are used for the bioremediation of As contaminated groundwater; however, it is not yet known about how arsenic affects biofilm formations of AOB, and how biofilm formations affect bacterial arsenite-oxidizing activities. To address these issues, we isolated seven novel AOB strains from the arsenic-contaminated soils. They can completely oxidize 1.0 mM As(III) in 22-60 h. Their arsenite oxidase sequences show 43-99% identities to those of other known AOB. Strains Cug1, Cug2, Cug3, Cug4, and Cug6 are able to form biofilms with thickness of 15-95 µm, whereas Cug8 and Cug9 cannot form biofilms. It is interesting to see that arsenite inhibited the biofilm formations of heterotrophic AOB strains, but promoted the biofilm formations of autotrophic strains in a concentration-dependent manner. The arsenite-oxidizing rates of Cug1 and Cug4 biofilms are 31.6% and 27.6% lower than those of their suspension cultures, whereas the biofilm activities of other strains are similar to those of their suspension cultures. The biofilm formation significantly promoted the bacterial resistance to arsenic. This work is the first report on the complex correlations among environmental arsenic, bacterial biofilm formations and bacterial arsenite-oxidizing activities. The data highlight the diverse lifestyle of different AOB under arsenic stress, and provide essential knowledge for the screening of efficient AOB strains used for constructions of bioreactors.
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Affiliation(s)
- Xian-Chun Zeng
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China.
| | - Zhong He
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
| | - Xiaoming Chen
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
| | - Qian A D Cao
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
| | - Hao Li
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
| | - Yanxin Wang
- State Key Laboratory of Biogeology and Environmental Geology, School of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430070, People's Republic of China
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14
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Peng L, Dai X, Liu Y, Wei W, Sun J, Xie GJ, Wang D, Song S, Ni BJ. Kinetic assessment of simultaneous removal of arsenite, chlorate and nitrate under autotrophic and mixotrophic conditions. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 628-629:85-93. [PMID: 29428863 DOI: 10.1016/j.scitotenv.2018.02.034] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Revised: 02/01/2018] [Accepted: 02/03/2018] [Indexed: 06/08/2023]
Abstract
In this work, a kinetic model was proposed to evaluate the simultaneous removal of arsenite (As (III)), chlorate (ClO3-) and nitrate (NO3-) in a granule-based mixotrophic As (III) oxidizing bioreactor for the first time. The autotrophic kinetics related to growth-linked As (III) oxidation and ClO3- reduction by As (III) oxidizing bacteria (AsOB) were calibrated and validated based on experimental data from batch test and long-term reactor operation under autotrophic conditions. The heterotrophic kinetics related to non-growth linked As (III) oxidation and ClO3- reduction by heterotrophic bacteria (HB) were evaluated based on the batch experimental data under heterotrophic conditions. The existing kinetics related to As (III) oxidation with NO3- as the electron acceptor together with heterotrophic denitrification were incorporated into the model framework to assess the bioreactor performance in treatment of the three co-occurring contaminants. The results revealed that under autotrophic conditions As (III) was completely oxidized by AsOB (over 99%), while ClO3- and NO3- were poorly removed. Under mixotrophic conditions, the simultaneous removal of the three contaminants was achieved with As (III) oxidized mostly by AsOB and ClO3- and NO3- removed mostly by HB. Both hydraulic retention time (HRT) and influent organic matter (COD) concentration significantly affected the removal efficiency. Above 90% of As (III), ClO3- and NO3- were removed in the mixotrophic bioreactor under optimal operational conditions of HRT and influent COD.
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Affiliation(s)
- Lai Peng
- School of Resources and Environmental Engineering, Wuhan University of Technology, Luoshi Road 122, Wuhan, Hubei, 430070, China
| | - Xiaohu Dai
- State Key Laboratory of Pollution Control and Resources Reuse, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, PR China; Shanghai Institute of Pollution Control and Ecological Security.
| | - Yiwen Liu
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, Sydney, NSW 2007, Australia; Water Chemistry and Water Technology, Engler-Bunte-Institut, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Wei Wei
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin, China
| | - Jing Sun
- State Key Laboratory of Pollution Control and Resources Reuse, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, PR China; Shanghai Institute of Pollution Control and Ecological Security
| | - Guo-Jun Xie
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin, China
| | - Dongbo Wang
- College of Environmental Science and Engineering, Hunan University, Changsha, 410082, China; Key Laboratory of Environmental Biology and Pollution Control, Hunan University, Ministry of Education, Changsha, 410082, China
| | - Shaoxian Song
- School of Resources and Environmental Engineering, Wuhan University of Technology, Luoshi Road 122, Wuhan, Hubei, 430070, China
| | - Bing-Jie Ni
- State Key Laboratory of Pollution Control and Resources Reuse, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, PR China; Shanghai Institute of Pollution Control and Ecological Security.
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15
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Plewniak F, Crognale S, Rossetti S, Bertin PN. A Genomic Outlook on Bioremediation: The Case of Arsenic Removal. Front Microbiol 2018; 9:820. [PMID: 29755441 PMCID: PMC5932151 DOI: 10.3389/fmicb.2018.00820] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2018] [Accepted: 04/10/2018] [Indexed: 01/07/2023] Open
Abstract
Microorganisms play a major role in biogeochemical cycles. As such they are attractive candidates for developing new or improving existing biotechnological applications, in order to deal with the accumulation and pollution of organic and inorganic compounds. Their ability to participate in bioremediation processes mainly depends on their capacity to metabolize toxic elements and catalyze reactions resulting in, for example, precipitation, biotransformation, dissolution, or sequestration. The contribution of genomics may be of prime importance to a thorough understanding of these metabolisms and the interactions of microorganisms with pollutants at the level of both single species and microbial communities. Such approaches should pave the way for the utilization of microorganisms to design new, efficient and environmentally sound remediation strategies, as exemplified by the case of arsenic contamination, which has been declared as a major risk for human health in various parts of the world.
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Affiliation(s)
- Frédéric Plewniak
- Génétique Moléculaire, Génomique et Microbiologie, UMR7156 CNRS, Université de Strasbourg, Strasbourg, France
| | - Simona Crognale
- Istituto di Ricerca sulle Acque, Consiglio Nazionale delle Ricerche, Rome, Italy
| | - Simona Rossetti
- Istituto di Ricerca sulle Acque, Consiglio Nazionale delle Ricerche, Rome, Italy
| | - Philippe N Bertin
- Génétique Moléculaire, Génomique et Microbiologie, UMR7156 CNRS, Université de Strasbourg, Strasbourg, France
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16
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Guan X, Yan X, Li Y, Jiang B, Luo X, Chi X. Diversity and arsenic-tolerance potential of bacterial communities from soil and sediments along a gold tailing contamination gradient. Can J Microbiol 2017; 63:788-805. [DOI: 10.1139/cjm-2017-0214] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Gold tailings often release arsenic (As) contaminants into the surrounding environment. Microorganisms play an important role in the As cycle, whereas the effects of As on bacterial communities remain unclear. To reveal the effects of As on the diversity of bacterial communities and their As-tolerance potential, farmland soil and river sediment samples were collected at various distances from tailings in the Dandong area of northeastern China. The bacterial communities were analyzed using high-throughput sequencing of 16S rRNA genes. The membrane transport proteins ArsB and (or) ACR3 pump As(III) out of the cell to resist As toxicity. We studied the abundance and phylogeny of ArsB and ACR3 using PCR-based clone libraries and quantitative PCR. The bacterial community was divided into 10 phyla and 59 genera. The transformation from As(V) to As(III) was predominant, which was coupled with denitrification. Both ArsB and ACR3 likely evolved from different orders of Proteobacteria. The arsB gene seems to be more stable in bestowing bacteria with the capability to respond to the As concentration. Moreover, As with iron, manganese, and total organic carbon also influenced the clustering relationships of samples and bacterial distribution.
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Affiliation(s)
- Xiangyu Guan
- School of Ocean Sciences, China University of Geosciences, Beijing 100083, People’s Republic of China
| | - Xu Yan
- School of Ocean Sciences, China University of Geosciences, Beijing 100083, People’s Republic of China
- Beijing Key Laboratory of Water Resources and Environmental Engineering, China University of Geosciences, Beijing 100083, People’s Republic of China
| | - Youxun Li
- Beijing Key Laboratory of Water Resources and Environmental Engineering, China University of Geosciences, Beijing 100083, People’s Republic of China
- National Oceanographic Center, Qingdao 266071, People’s Republic of China
| | - Bo Jiang
- School of Ocean Sciences, China University of Geosciences, Beijing 100083, People’s Republic of China
| | - Ximing Luo
- School of Ocean Sciences, China University of Geosciences, Beijing 100083, People’s Republic of China
| | - Xiaoyuan Chi
- Shandong Peanut Research Institute, Qingdao 266100, People’s Republic of China
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17
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Li H, Zeng XC, He Z, Chen X, E G, Han Y, Wang Y. Long-term performance of rapid oxidation of arsenite in simulated groundwater using a population of arsenite-oxidizing microorganisms in a bioreactor. WATER RESEARCH 2016; 101:393-401. [PMID: 27288673 DOI: 10.1016/j.watres.2016.05.058] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2015] [Revised: 05/12/2016] [Accepted: 05/17/2016] [Indexed: 06/06/2023]
Abstract
A population of arsenite-oxidizing microorganisms enriched from the tailing of the Shimen realgar mine was used to generate biofilms on the surfaces of perlites. This bioreactor is able to completely oxidize 1100 μg/L As(III) dissolved in simulated groundwater into As(V) within 10 min; after 140 days of operation, approximately 20 min were required to completely oxidize the same concentration of As(III). Analysis for the 16S rRNA genes of the microbial community showed that Bacteroidetes and Proteobacteria are dominant in the reactor. Six different bacterial strains were randomly isolated from the reactor. Function and gene analysis indicated that all the isolates possess arsenite-oxidizing activity, and five of them are chemoautotrophic. Further analysis showed that a large diversity of AioAs and two types of RuBisCOs are present in the microbial community. This suggests that many chemoautotrophic arsenite-oxidizing microorganisms were responsible for quick oxidation of arsenite in the reactor. We also found that the reactor is easily regenerated and its number is readily expanded. To the best of our knowledge, the arsenite-oxidizing efficiency, which was expressed as the minimum time for complete oxidization of a certain concentration of As(III) under a single operation, of this bioreactor is the highest among the described bioreactors; it is also the most stable, economic and environment-friendly.
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Affiliation(s)
- Hao Li
- Department of Biological Science and Technology, School of Environmental Studies & State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences (Wuhan), Wuhan 430074, People's Republic of China
| | - Xian-Chun Zeng
- Department of Biological Science and Technology, School of Environmental Studies & State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences (Wuhan), Wuhan 430074, People's Republic of China.
| | - Zhong He
- Department of Biological Science and Technology, School of Environmental Studies & State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences (Wuhan), Wuhan 430074, People's Republic of China
| | - Xiaoming Chen
- Department of Biological Science and Technology, School of Environmental Studies & State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences (Wuhan), Wuhan 430074, People's Republic of China
| | - Guoji E
- Department of Biological Science and Technology, School of Environmental Studies & State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences (Wuhan), Wuhan 430074, People's Republic of China
| | - Yiyang Han
- Department of Biological Science and Technology, School of Environmental Studies & State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences (Wuhan), Wuhan 430074, People's Republic of China
| | - Yanxin Wang
- Department of Biological Science and Technology, School of Environmental Studies & State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences (Wuhan), Wuhan 430074, People's Republic of China
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Purification of high ammonia wastewater in a biofilm airlift loop bioreactor with microbial communities analysis. World J Microbiol Biotechnol 2014; 31:49-57. [DOI: 10.1007/s11274-014-1763-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2014] [Accepted: 10/20/2014] [Indexed: 10/24/2022]
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19
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Kruger MC, Bertin PN, Heipieper HJ, Arsène-Ploetze F. Bacterial metabolism of environmental arsenic--mechanisms and biotechnological applications. Appl Microbiol Biotechnol 2013; 97:3827-41. [PMID: 23546422 DOI: 10.1007/s00253-013-4838-5] [Citation(s) in RCA: 104] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2013] [Revised: 03/05/2013] [Accepted: 03/06/2013] [Indexed: 01/13/2023]
Abstract
Arsenic causes threats for environmental and human health in numerous places around the world mainly due to its carcinogenic potential at low doses. Removing arsenic from contaminated sites is hampered by the occurrence of several oxidation states with different physicochemical properties. The actual state of arsenic strongly depends on its environment whereby microorganisms play important roles in its geochemical cycle. Due to its toxicity, nearly all organisms possess metabolic mechanisms to resist its hazardous effects, mainly by active extrusion, but also by extracellular precipitation, chelation, and intracellular sequestration. Some microbes are even able to actively use various arsenic compounds in their metabolism, either as an electron donor or as a terminal electron acceptor for anaerobic respiration. Some microorganisms can also methylate inorganic arsenic, probably as a resistance mechanism, or demethylate organic arsenicals. Bioavailability of arsenic in water and sediments is strongly influenced by such microbial activities. Therefore, understanding microbial reactions to arsenic is of importance for the development of technologies for improved bioremediation of arsenic-contaminated waters and environments. This review gives an overview of the current knowledge on bacterial interactions with arsenic and on biotechnologies for its detoxification and removal.
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Affiliation(s)
- Martin C Kruger
- Department of Environmental Biotechnology, Helmholtz Centre for Environmental Research-UFZ, Permoserstr. 15, 04318 Leipzig, Germany
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Zhang W, Zhang X, Wang D, Koga Y, Rouse JD, Furukawa K. Trace elements enhance biofilm formation in UASB reactor for solo simple molecule wastewater treatment. BIORESOURCE TECHNOLOGY 2011; 102:9296-9299. [PMID: 21775133 DOI: 10.1016/j.biortech.2011.06.095] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2011] [Revised: 06/27/2011] [Accepted: 06/28/2011] [Indexed: 05/31/2023]
Abstract
In this paper, trace elements (TE) adding was investigated in one bench-scale UASB reactor treating solo simple molecule wastewater with the aim of evaluating its effect on enhancing biofilm formation. After adding sufficient TE (3 mL/L) in the influent, during 3 days, COD removal efficiency increased from 74% to 90% comparing to no adding TE. Over 55 days of operation, the organic loading rate (OLR) reached 11 g/L/day with COD removal efficiencies greater than 90%. While in the steady running period no effect even improvement on treatment performance was observed without any TE adding. The results illuminated that TE accounted for quick start-up of the UASB biofilm system rather than ever known biocatalyst.
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Affiliation(s)
- Wenjie Zhang
- The Guangxi Key Laboratory of Environmental Engineering, Protection and Assessment, College of Environmental Science and Engineering, Guilin University of Technology, 12 Jiangan Road, Guilin 541004, PR China.
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