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Ariaeenejad S, Motamedi E, Kavousi K, Ghasemitabesh R, Goudarzi R, Salekdeh GH, Zolfaghari B, Roy S. Enhancing the ethanol production by exploiting a novel metagenomic-derived bifunctional xylanase/β-glucosidase enzyme with improved β-glucosidase activity by a nanocellulose carrier. Front Microbiol 2023; 13:1056364. [PMID: 36687660 PMCID: PMC9845577 DOI: 10.3389/fmicb.2022.1056364] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 11/21/2022] [Indexed: 01/06/2023] Open
Abstract
Some enzymes can catalyze more than one chemical conversion for which they are physiologically specialized. This secondary function, which is called underground, promiscuous, metabolism, or cross activity, is recognized as a valuable feature and has received much attention for developing new catalytic functions in industrial applications. In this study, a novel bifunctional xylanase/β-glucosidase metagenomic-derived enzyme, PersiBGLXyn1, with underground β-glucosidase activity was mined by in-silico screening. Then, the corresponding gene was cloned, expressed and purified. The PersiBGLXyn1 improved the degradation efficiency of organic solvent pretreated coffee residue waste (CRW), and subsequently the production of bioethanol during a separate enzymatic hydrolysis and fermentation (SHF) process. After characterization, the enzyme was immobilized on a nanocellulose (NC) carrier generated from sugar beet pulp (SBP), which remarkably improved the underground activity of the enzyme up to four-fold at 80°C and up to two-fold at pH 4.0 compared to the free one. The immobilized PersiBGLXyn1 demonstrated 12 to 13-fold rise in half-life at 70 and 80°C for its underground activity. The amount of reducing sugar produced from enzymatic saccharification of the CRW was also enhanced from 12.97 g/l to 19.69 g/l by immobilization of the enzyme. Bioethanol production was 29.31 g/l for free enzyme after 72 h fermentation, while the immobilized PersiBGLXyn1 showed 51.47 g/l production titre. Overall, this study presented a cost-effective in-silico metagenomic approach to identify novel bifunctional xylanase/β-glucosidase enzyme with underground β-glucosidase activity. It also demonstrated the improved efficacy of the underground activities of the bifunctional enzyme as a promising alternative for fermentable sugars production and subsequent value-added products.
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Affiliation(s)
- Shohreh Ariaeenejad
- Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), Karaj, Iran,*Correspondence: Shohreh Ariaeenejad, ;
| | - Elaheh Motamedi
- Department of Nanotechnology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), Karaj, Iran
| | - Kaveh Kavousi
- Laboratory of Complex Biological Systems and Bioinformatics (CBB), Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, Iran
| | - Rezvaneh Ghasemitabesh
- Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), Karaj, Iran
| | - Razieh Goudarzi
- Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), Karaj, Iran
| | - Ghasem Hosseini Salekdeh
- Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), Karaj, Iran,Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia,Ghasem Hosseini Salekdeh,
| | - Behrouz Zolfaghari
- Department of Integrated Art and Sciences, Faculty of Education, Waseda University, Tokyo, Japan
| | - Swapnoneel Roy
- School of Computing, University of North Florida, Jacksonville, FL, United States
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Choi IS, Ko SH, Kim HM, Yang JE, Jeong SG, Chang JY, Lee KH, Qi SB, Xin Q, Cui CB, Moon JH, Park HW. Coffee residue as a valorization bio-agent for shelf-life extension of lactic acid bacteria under cryopreservation. WASTE MANAGEMENT (NEW YORK, N.Y.) 2020; 118:585-590. [PMID: 33010689 DOI: 10.1016/j.wasman.2020.09.025] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2020] [Revised: 08/11/2020] [Accepted: 09/15/2020] [Indexed: 05/24/2023]
Abstract
The present work describes the feasibility of coffee residue extracts as cryoprotective agents in the storage stability of freeze-dried lactic acid bacteria. Coffee residue extracts were extracted from coffee residue, produced after coffee extraction for coffee powder and instant coffee preparation, using an autoclave. Leuconostoc mesenteroides WiKim32 was selected to evaluate the ability of coffee residue extracts to protect bacteria during freeze-dried storage. The storage stability of freeze-dried Leu. mesenteroides WiKim32 with coffee residue extracts was comparable to those with commercial cryoprotective agents. Coffee residue extracts contributed to storage stability immediately after freeze-drying (61.2%) and subsequent storage (48.7%). Our data indicate that the protective effect of the coffee residue extracts is associated with ions, carbohydrates, and phenolic compounds. Coffee residue extracts are feasible materials, which can reduce the storage and distribution costs compared to commercial agents currently available.
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Affiliation(s)
- In Seong Choi
- R&D Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Seung Hee Ko
- R&D Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea; Department of Food Science and Technology, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Ho Myeong Kim
- R&D Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Jung Eun Yang
- R&D Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Seul-Gi Jeong
- R&D Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Ji Yoon Chang
- R&D Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Kwang Ho Lee
- Center for Research Facilities, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Shi-Bo Qi
- Key Laboratory of Natural Resources of Changbai Mountain and Functional Molecules, Yanbian University, Ministry of Education, Yanji, Jilin 133002, China
| | - Qi Xin
- College of Pharmacy, Yanbian University, Yanji, Jilin 133002, China
| | - Cheng-Bi Cui
- Key Laboratory of Natural Resources of Changbai Mountain and Functional Molecules, Yanbian University, Ministry of Education, Yanji, Jilin 133002, China
| | - Jae-Hak Moon
- Department of Food Science and Technology, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Hae Woong Park
- R&D Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea.
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Kim HM, Choi IS, Lee S, Yang JE, Jeong SG, Park JH, Ko SH, Hwang IM, Chun HH, Wi SG, Kim JC, Park HW. Biorefining Process of Carbohydrate Feedstock (Agricultural Onion Waste) to Acetic Acid. ACS OMEGA 2019; 4:22438-22444. [PMID: 31909326 PMCID: PMC6941178 DOI: 10.1021/acsomega.9b03093] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2019] [Accepted: 11/27/2019] [Indexed: 06/10/2023]
Abstract
The biorefining of agricultural waste into green chemicals has clear potential for improving global environmental sustainability. In this study, we evaluated the potential of acetic acid production from carbohydrate feedstock (onion waste, OW) as a more environmentally friendly source than feedstock produced from natural gas. In particular, OW is an ideal feedstock for the biorefining process as it contains a sufficient amount of carbohydrates (69.7%). Five days of the simultaneous saccharification and two-step fermentation (SSTF) process produced acetic acid from OW more efficiently than the simultaneous saccharification and cofermentation (SSCF) process. SSTF produced 19.3 g/L acetic acid and recorded the highest conversion yield (90.5%) from OW (6% substrate loading, w/v). These results suggested that acetic acid can be efficiently and sustainably produced from OW by the SSTF process.
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Affiliation(s)
- Ho Myeong Kim
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - In Seong Choi
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Seoyoun Lee
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Jung Eun Yang
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Seul-Gi Jeong
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Ji Hye Park
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Seung Hee Ko
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - In Min Hwang
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Ho Hyun Chun
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Seung Gon Wi
- Asian Pear Research
Institute and Division of Applied Bioscience & Biotechnology, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Jin-Cheol Kim
- Asian Pear Research
Institute and Division of Applied Bioscience & Biotechnology, Chonnam National University, Gwangju 61186, Republic of Korea
| | - Hae Woong Park
- R&D
Division, World Institute of Kimchi, Gwangju 61755, Republic of Korea
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Kim HM, Choi IS, Lee S, Hwang IM, Chun HH, Wi SG, Kim JC, Shin TY, Kim JC, Kim JS, Kim J, Park HW. Advanced strategy to produce insecticidal destruxins from lignocellulosic biomass Miscanthus. BIOTECHNOLOGY FOR BIOFUELS 2019; 12:188. [PMID: 31367233 PMCID: PMC6657178 DOI: 10.1186/s13068-019-1530-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 07/18/2019] [Indexed: 06/01/2023]
Abstract
BACKGROUND Biorefineries are widely recognized as the most feasible solution to the problem of achieving environmental sustainability along with economic growth. Furthermore, pine wilt disease has caused severe environmental and economic damage worldwide to date. Herein, a highly efficient, advanced process for producing destruxins (DTXs) from Miscanthus (MCT) is reported, along with an application strategy. RESULTS The acetic acid-sodium chlorite pretreatment of MCT (AASC-MCT) is found to improve the monosaccharide production. Through biocatalytic conversion processes (simultaneous saccharification and cultivation), Metarhizium anisopliae JEF-279 can efficiently produce DTXs from 1% (w/v) AASC-MCT, i.e., DTX E (334.8 mg/L), A (288.8 mg/L), and B (48.6 mg/L). Monochamus alternatus (MA, Japanese pine sawyer) is known to act as a mediator transferring Bursaphelenchus xylophilus to pinewood. As B. xylophilus is associated with the occurrence of pine wilt disease, biological control of MA is a major strategy or controlling this disease. In this study, upon the application of a mixture of DTXs and protease-containing culture filtrate (PCF), complete mortality of MA is observed after a 5-day incubation. The MA immune system response is believed to cause an overexpression of actin and tropomyosin as a defense mechanism against the flaccid paralysis induced by the DTXs and PCF treatment. CONCLUSIONS These results suggest that MCT can be used as a major feedstock in the biorefinery industry and that DTXs can be applied as an insecticide for biological control of pine wilt disease via MA termination.
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Affiliation(s)
- Ho Myeong Kim
- R&D Division, World Institute of Kimchi, 86 Kimchi-ro, Nam-gu, Gwangju, 61755 Republic of Korea
| | - In Seong Choi
- R&D Division, World Institute of Kimchi, 86 Kimchi-ro, Nam-gu, Gwangju, 61755 Republic of Korea
| | - Seoyoun Lee
- R&D Division, World Institute of Kimchi, 86 Kimchi-ro, Nam-gu, Gwangju, 61755 Republic of Korea
| | - In Min Hwang
- R&D Division, World Institute of Kimchi, 86 Kimchi-ro, Nam-gu, Gwangju, 61755 Republic of Korea
| | - Ho Hyun Chun
- R&D Division, World Institute of Kimchi, 86 Kimchi-ro, Nam-gu, Gwangju, 61755 Republic of Korea
| | - Seung Gon Wi
- Asian Pear Research Institute, Chonnam National University, Gwangju, 61186 Republic of Korea
| | - Jin-Cheol Kim
- Division of Applied Bioscience & Biotechnology, Chonnam National University, Gwangju, 61186 Republic of Korea
| | - Tae Young Shin
- Department of Agricultural Biology, College of Agricultural and Life Sciences, Chonbuk National University, Jeonju, 54896 Republic of Korea
| | - Jong Cheol Kim
- Department of Agricultural Biology, College of Agricultural and Life Sciences, Chonbuk National University, Jeonju, 54896 Republic of Korea
| | - Jae Su Kim
- Department of Agricultural Biology, College of Agricultural and Life Sciences, Chonbuk National University, Jeonju, 54896 Republic of Korea
| | - Junheon Kim
- National Institute of Forest Science, Seoul, 02455 Republic of Korea
| | - Hae Woong Park
- R&D Division, World Institute of Kimchi, 86 Kimchi-ro, Nam-gu, Gwangju, 61755 Republic of Korea
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Cao X, Zhang M, Chitrakar B, Mujumdar AS, Zhong Q, Wang Z, Wang L. Radiofrequency heating for powder pasteurization of barley grass: antioxidant substances, sensory quality, microbial load and energy consumption. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2019; 99:4460-4467. [PMID: 30868590 DOI: 10.1002/jsfa.9683] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2018] [Revised: 02/28/2019] [Accepted: 03/08/2019] [Indexed: 06/09/2023]
Abstract
BACKGROUND Young barley grass powder contains abundant nutrition and its antioxidant substances are severely impaired by radiation (60 Co) sterilization. To overcome product quality degradation, radiofrequency pasteurization was conducted using pilot-scale radiofrequency equipment (27 MHz, 6 kW) with electrode gaps of 12, 14 and 16 cm, while hot-air (80 °C) pasteurization was used for comparison. RESULTS Assessment suggested that uneven radiofrequency heating was improved for the 14 cm electrode gap. With an increase of electrode gap, microbial inactivation needs more energy consumption. A minimum energy consumption of 970 J g-1 was required for 1 log-reduction of colonies. Radiofrequency pasteurization retained better antioxidant substances, lightness (L*), green color (a*) and odors in barley grass powder, compared with hot-air sterilization. Contents of flavonoid and chlorophyll were 5.82 and 4.87 g kg-1 respectively, using the 14 cm electrode gap. Additionally, radiofrequency pasteurization led to an improvement in sourness, bitterness and umami tastes. CONCLUSIONS Radiofrequency pasteurization would be a superior alternative for the pasteurization of barley grass powder. © 2019 Society of Chemical Industry.
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Affiliation(s)
- Xiaohuang Cao
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China
- International Joint Laboratory on Food Safety, Jiangnan University, Wuxi city, Jiangsu Province, China
- Jiangsu Province Key Laboratory of Advanced Food Manufacturing Equipment and Technology, Jiangnan University, Wuxi city, Jiangsu Province, China
| | - Min Zhang
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China
- International Joint Laboratory on Food Safety, Jiangnan University, Wuxi city, Jiangsu Province, China
| | - Bimal Chitrakar
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China
| | - Arun S Mujumdar
- Department of Bioresource Engineering, Macdonald Campus, McGill University, Sainte-Anne-e de Bellevue, Canada
| | | | | | - Liping Wang
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, China
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Yu N, Tan L, Sun ZY, Nishimura H, Takei S, Tang YQ, Kida K. Bioethanol from sugarcane bagasse: Focused on optimum of lignin content and reduction of enzyme addition. WASTE MANAGEMENT (NEW YORK, N.Y.) 2018; 76:404-413. [PMID: 29625877 DOI: 10.1016/j.wasman.2018.03.047] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2017] [Revised: 03/16/2018] [Accepted: 03/28/2018] [Indexed: 05/16/2023]
Abstract
To investigate the effect of delignification on enzymatic saccharification and ethanol fermentation of sugarcane bagasse (SCB), NaClO, NaOH, and Na2CO3 were used to prepare SCB with different lignin contents. We found that a lignin content of approximately 11% was sufficient for enzymatic saccharification and fermentation. Based on this result, an economical delignification pretreatment method using a combination of acid and alkali (CAA) was applied. Lignin content of 11.7% was obtained after CAA pretreatment with 0.5% w/v H2SO4 at 140 °C for 10 min and 1.0% w/v NaOH at 90 °C for 60 min. Presaccharification-simultaneous saccharification and fermentation (P-SSF) of the CAA-pretreated SCB resulted in an ethanol concentration of 43.8 g/L and an ethanol yield of 81.7%, with an enzyme loading of 15 FPU/g-CAA-pretreated SCB. Enzyme activities (filter paper, carboxymethyl cellulase, and β-glucosidase activities) were determined in liquid phase during P-SSF, indicating that the residual cellulase activity could be further used. Thus, fed-batch P-SSF was carried out, and an ethanol concentration of 43.1 g/L and an ethanol yield of 80.4% were obtained with an enzyme loading of 10 FPU/g-CAA-pretreated SCB. Fed-batch P-SSF was found to be effective to reduce enzyme loading.
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Affiliation(s)
- Na Yu
- College of Architecture and Environment, Sichuan University, No. 24 South Section 1, First Ring Road, Chengdu 610065, China; Civil Engineering Department, Sichuan Engineering Technical College, Deyang 618000, China
| | - Li Tan
- Key Laboratory of Environmental and Applied Microbiology, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China; Environmental Microbiology Key Laboratory of Sichuan Province, Chengdu 610041, China.
| | - Zhao-Yong Sun
- College of Architecture and Environment, Sichuan University, No. 24 South Section 1, First Ring Road, Chengdu 610065, China.
| | - Hiroto Nishimura
- Graduate School of Science and Technology, Kumamoto University, 2-39-1 Kurokami, Kumamoto 860-8555, Japan
| | - Shouta Takei
- Graduate School of Science and Technology, Kumamoto University, 2-39-1 Kurokami, Kumamoto 860-8555, Japan
| | - Yue-Qin Tang
- College of Architecture and Environment, Sichuan University, No. 24 South Section 1, First Ring Road, Chengdu 610065, China
| | - Kenji Kida
- College of Architecture and Environment, Sichuan University, No. 24 South Section 1, First Ring Road, Chengdu 610065, China
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Wang Z, Hou X, Sun J, Li M, Chen Z, Gao Z. Comparison of ultrasound-assisted ionic liquid and alkaline pretreatment of Eucalyptus for enhancing enzymatic saccharification. BIORESOURCE TECHNOLOGY 2018; 254:145-150. [PMID: 29413915 DOI: 10.1016/j.biortech.2018.01.021] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2017] [Revised: 01/03/2018] [Accepted: 01/04/2018] [Indexed: 05/14/2023]
Abstract
Two ultrasound-assisted pretreatment technologies, ultrasound-assisted alkaline and ultrasound-assisted aqueous ionic liquid tetrabutylammonium hydroxide ([TBA][OH]), are compared systematically in regard to enzymatic saccharification. Pretreated Eucalyptus samples were characterized by powder X-ray diffraction, 13C cross polarization/magic-angle spinning solid state NMR spectroscopy, Fourier transform infrared spectroscopy, Scanning electron microscope (SEM) and chemistry composition analysis. These results not only explain the enzymatic saccharification difference between samples from the microstructure level, but also provide helpful information for relevant pretreatment research. Ultrasound-assisted [TBA][OH] pretreatment acquired a significant enhancement in the initial enzymatic rate of cellulose (79.39 mg/g/h), and a reducing sugar yield of 426.6 mg/g at 48 h. The pretreatment combining inexpensive aqueous ionic liquid and ultrasound may provide a promising strategy in the field of bio-refinery because of its unique advantages.
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Affiliation(s)
- Zhinan Wang
- College of Materials & Energy, South China Agricultural University, Guangzhou 510642, China
| | - Xianfeng Hou
- College of Materials & Energy, South China Agricultural University, Guangzhou 510642, China
| | - Jin Sun
- College of Materials & Energy, South China Agricultural University, Guangzhou 510642, China
| | - Meng Li
- College of Materials & Energy, South China Agricultural University, Guangzhou 510642, China
| | - Zhiyong Chen
- Zhongshan Collaborative Innovation Center of National Analytical Center of China, Zhongshan 528476, China
| | - Zhenzhong Gao
- College of Materials & Energy, South China Agricultural University, Guangzhou 510642, China.
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