Novel intertidal wetland sediment-inoculated moving bed biofilm reactor treating high-salinity wastewater: Metagenomic sequencing revealing key functional microorganisms

Rapid start-up of nitrogen and organic matter removal in sequencing batch biofilm reactors treating hypersaline mustard tuber wastewater with autochthonous microorganisms

The treatment of hypersaline industrial wastewater (≥50 g NaCl L-1) faces persistent challenges in start-up and nitrogen removal efficiency due to microbial inhibition under extreme salinity. However, leveraging native microbial consortia for rapid system establishment remains underexplored. This study proposed a rapid-start strategy for sequencing batch biofilm reactors (SBBRs) treating hypersaline mustard tuber wastewater (MTWW) through in-situ enrichment of autochthonous microorganisms in MTWW. Five SBBRs, each with distinct inoculation (municipal sludge vs. autochthonous microorganisms) and salinity-increase strategies (direct vs. gradual increase), were systematically compared. Systems acclimated with autochthonous microorganisms achieved start-up within 30 days (Phase Ⅰ:0-30 g NaCl L-1 and Phase Ⅱ: 30-70 g NaCl L-1), with COD and TN removal efficiencies of 82.40 %-92.85 % and 85.72 %-94.68 %, respectively. Notably, rapid-start systems maintained comparable TN and COD removal to gradual acclimation (p > 0.05) despite transient nitrification instability during dissolved oxygen fluctuations (recovered within 5∼6 cycles). The rapid-start reactors demonstrated greater ammonia oxidation activity, driven by the dominance of ammonia-oxidizing archaea (AOA) over bacteria (AOB). Rapid salinity increases selectively enriched halophilic functional bacteria, such as Halomonas, Nitratireductor, Arcobacter, and Phaeodactylibacter, supporting anoxic/aerobic and sulfur-driven autotrophic denitrification processes. Most of the functional microorganisms across all reactors originated directly from the MTWW, confirming the indispensability of autochthonous inoculum. Our findings demonstrate that autochthonous microorganisms in hypersaline MTWW can be directly engineered for rapid system establishment, bypassing lengthy acclimation. This strategy reduces start-up costs and provides a scalable solution for industries requiring immediate hypersaline wastewater treatment capacity.

An innovative high-rate biofilm-based process: Biopolymer production and recovery from wastewater organic pollutants

In this study, a novel high-rate moving bed biofilm reactor (MBBR) was constructed to enhance wastewater COD bio-conversion and biopolymer recovery with a hydraulic retention time (HRT) of 1.0 h and an organic loading rate (OLR) of 4.8 kg COD·m-3·d-1. A superior specific COD reduction rate of 4.1 kg COD·m-3·d-1 was obtained. The settleability analyses showed that within a settling time of 30 min, a low effluent suspended solids (SS) concentration (40.6 mg/L) with a high biomass recovery rate (83.3%) was achieved. From the recovered biomass, a remarkably higher alginate-like exopolymer (ALE) yield (274.2-385.1 mg/g VSS) was extracted as compared with seeding sludge (148.3 mg/g VSS). In addition, high protein/polysaccharide ratios of 8.5-12.4 were revealed owing to the short HRT condition. Moreover, key functional genes involving classic ALE synthesis were fully detected in such mixed-cultured bioprocess through metagenomic sequencing. Overall, this study offers a proof of concept that bio-refinery of organics into value-added biopolymers could provide a promising direction for the transformation of wastewater treatment plants from energy/resource-consuming factories to resource-recovery factories.

Bio-Refinery of Organics into Value-Added Biopolymers: Exploring the Effects of Hydraulic Retention Time and Organic Loading Rate on Biopolymer Harvesting from a Biofilm-Based Process

This study aimed to examine the impacts of hydraulic retention time (HRT) and organic loading rate (OLR) on the alginate-like exopolymers' (ALEs) recovery potential from a biofilm-based process. A lab-scale moving bed biofilm reactor (MBBR) was operated under different HRT (12.0, 6.0, and 2.0 h) and OLR (1.0, 2.0, and 6.0 kg COD/m3/d) conditions. The results demonstrated that the reduction in HRT and increase in OLR had remarkable effects on enhancing ALE production and improving its properties, which resulted in the ALE yield increasing from 177.8 to 221.5 mg/g VSS, with the protein content rising from 399.3 to 494.3 mg/g ALE and the enhanced alginate purity by 39.8%, corresponding to the TOC concentration increasing from 108.3 to 157.0 mg/g ALE. Meanwhile, to illustrate different ALE recovery potentials, microbial community compositions of the MBBR at various operational conditions were also assessed. The results showed that a higher relative abundance of EPS producers (29.86%) was observed in the MBBR with an HRT of 2.0 h than that of 12.0 h and 6.0 h, revealing its higher ALE recovery potential. This study yields crucial results in terms of resource recovery for wastewater reclamation by providing an effective approach to directionally cultivating ALEs.

Functional characteristics and mechanisms of microbial community succession and assembly in a long-term moving bed biofilm reactor treating real municipal wastewater

Moving bed biofilm reactor (MBBR) technology with diverse merits is efficient in treating various waste streams whereas their microbial functional properties and ecology still need in-depth investigation, especially in real wastewater treatment systems. Herein, a well-controlled MBBR treating municipal wastewater was established to investigate the long-term system performance and the underlying principles of community succession and assembly. The system successfully achieved ammonium, TN, and chemical oxygen demand (COD) removal of 96.7 ± 2.2%, 75.2 ± 3.6%, and 90.3 ± 3.8%, respectively, under simplified operation and low energy consumption. The effluent TN concentrations achieved 6.2 ± 1.6 mg-N/L despite the influent fluctuations. Diverse functional denitrifiers, such as Denitratisoma, Thermomonas, and Flavobacterium, and the anammox bacteria Candidatus Brocadia successfully enriched in anoxic chamber biofilms. The nitrifiers Nitrosomonas (∼0.73%) and Nitrospira (∼14.0%) exhibited appreciable nitrification capacity in specialized aerobic chambers. Ecological null model and network analysis revealed that microbial community assembly was mainly regulated by niche-based deterministic processes and air diffusion in the aerobic chamber resulted in more intense and complex bacterial interactions. Environmental filters including influent substrate and operating conditions (e.g., reactor configuration, DO, and temperature) greatly shaped the microbial community structure and affected carbon and nitrogen metabolism. The positive ecological roles of influent microflora and functional redundancy in biofilm communities were believed to facilitate functional stability. The anammox process coupled with partial denitrification in a specialized chamber demonstrated positive application implications. These findings provided valuable perspectives in deciphering the microbiological and ecological mechanisms, functional properties, and application potentials of MBBR.

From waste to wealth: Exploring the effect of particle size on biopolymer harvesting from aerobic granular sludge

This study aimed to examine the impact of aerobic granular sludge (AGS) sizes on its properties and alginate-like exopolymers (ALE) recovery potential. The AGS was cultivated in a lab-scale bioreactor and categorized into six size classes with 200 μm intervals. There appeared a critical size (400-800 μm) for developing stable AGS structure and excellent ALE recovery. A higher hydrophobicity (74.36 %) and density (1,037 g/L) was observed in AGS400-600μm than other sizes. Moreover, the highest ALE yield was obtained in ALE600-800μm (388 mg/g VSS) for its higher abundance of EPS-producers (35.1 %), while the PN content of ALE400-600μm was higher than other samples. Meanwhile, the concentrations of metal elements within the ALE and AGS identified that there was no bio-accumulation of metal elements in the ALE. This study offers an in-depth understanding of biopolymer recovery from AGS, paving the way for a novel resource recovery strategy through the regulation of AGS sizes.

Performance and microbial mechanism in sulfide-driven autotrophic denitrification by different inoculation sources in face of various sulfide and sulfate stress

To develop a reliable sulfide (S2-) autotrophic denitrification (SAD) process under S2- and SO42- salinity stresses, the biofilm performance and microbial mechanisms were comparatively studied using different inocula of activated sludge (AS) and intertidal sediment (IS). Biofilm IS enriched more denitrification genes (0.34 %) and S2- oxidation genes (0.29 %) than those with AS. Higher denitrification performance was obtained under S2- (100 mg/L) and SO42- (5-15 g/L Na2SO4) stresses, but no significantly differences were observed under levels of 0-200 mg/L S2- and 30 g/L Na2SO4. Notably, biofilm samples in SAD systems with IS still had more S2- oxidation genes at high S2- levels of 100-200 mg/L and Na2SO4 level of 30 g/L. The key functional genus Thiobacillus accumulated well at 30 g/L Na2SO4, but was strongly inhibited at 200 mg/L S2-. The findings were advantage to SAD application under sulfide and salinity stresses.

Simultaneous efficient removal of tetracycline and mitigation of antibiotic resistance genes enrichment by a modified activated sludge process with static magnetic field

To address the increasing issue of antibiotic wastewater, this study applied a static magnetic field (SMF) to the activated sludge process to increase the efficiency of tetracycline (TC) removal from swine wastewater and to reveal its enhanced mechanisms. The results demonstrated that the SMF-modified activated sludge process could achieve almost complete TC removal at sludge loading rates of 0.3 mg TC/g MLSS/d. Analysis of zeta potential and extracellular polymeric substances composition of the activated sludge revealed that SMF increased electrostatic interactions between TC and activated sludge and made activated sludge has much more binding sites, finally resulting in the increased TC biosorption. Metagenomic analysis showed that SMF promoted the enrichment of ammonia-oxidizing bacteria, TC-degrading bacteria, and aromatic compounds-degrading bacteria; it also enhanced ammonia monooxygenase- and cytochrome P450-mediated TC metabolism while upregulating functional genes associated with oxidase, reductase, and dehydrogenase - all contributing to increased TC biodegradation. Additionally, SMF mitigated the enrichment and spread of antibiotic resistance genes (ARGs) by decreasing the abundance of potential hosts of ARGs and inhibiting the upregulation of genes encoding ABC transporters and putative transposase. Based on these findings, this study demonstrates that magnetic field is an enhancement strategy with great potential to relieve the harmful impacts of the growing antibiotic wastewater problem on human health and the ecosystem.

Unraveling the mechanisms and responses of aniline-degrading biosystem to salinity stress in high temperature condition: Pollutants removal performance and microbial community

To explore the intrinsic influence of different salinity content on aniline biodegradation system in high temperature condition of 35 ± 1 °C, six groups at various salinity concentration (0.0%-5.0%) were applied. The results showed that the salinity exerted insignificant impact on aniline removal performance. The low-level salinity (0.5%-1.5%) stimulated the nitrogen metabolism performance. The G5-2.5% had excellent adaptability to salinity while the nitrogen removal capacity of G6-5.0% was almost lost. Moreover, high throughput sequencing analysis revealed that the g__norank_f__NS9_marine_group, g__Thauera and g__unclassified_f__Rhodobacteraceae proliferated wildly and established positive correlation each other in low salinity systems. The g__SM1A02 occupying the dominant position in G5 ensured the nitrification performance. In contrast, the Rhodococcus possessing great survival advantage in tremendous osmotic pressure competed with most functional genus, triggering the collapse of nitrogen metabolism capacity in G6. This work provided valuable guidance for the aniline wastewater treatment under salinity stress in high temperature condition.

Partial nitrification-denitrification and enrichment of paracoccus induced by iron-chitosan beads addition in an intermittently-aerated activated sludge system

Insufficient carbon source has become the main limiting factor for efficient nitrogen removal in wastewater treatment. In this study, an intermittently-aerated activated sludge system with iron-chitosan (Fe-CS) beads addition was proposed for nitrogen removal from low C/N wastewater. By adding Fe-CS beads, partial nitrification-denitrification (PND) process and significant enrichment of Paracoccus (with ability of iron reduction/ammonium oxidation/aerobic denitrification) were observed in the reactor. The accumulation rate of NO2--N reached 81.9 %, and the total nitrogen removal efficiency was improved to 93.9 % by shortening the aeration time. The higher activity of ammonium oxidizing bacteria and inhibited activity of nitrite-oxidizing bacteria in Fe-CS assisted system mediated the occurrence of PND. In contrast, the traditional nitrification and denitrification process occurred in the control group. The high-throughput sequencing analysis and metagenomic results confirmed that the addition of Fe-CS induced 77.8 % and 54.9 % enrichment of Paracoccus in sludge and Fe-CS beads, respectively, while almost no enrichment was observed in control group. Furthermore, with the addition of Fe-CS beads, the expression of genes related to outer membrane porin, cytochrome c, and TCA was strengthened, thereby enhancing the electron transport of Fe(Ⅱ) (electron donor) and Fe(Ⅲ) (electron acceptor) with pollutants in the periplasm. This study provides new insights into the direct enrichment of iron-reducing bacteria and its PND performance induced by the Fe-CS bead addition. It therefore offers an appealing strategy for low C/N wastewater treatment.

Core taxa, co-occurrence pattern, diversity, and metabolic pathways contributing to robust anaerobic biodegradation of chlorophenol

It is hard to achieve robustness in anaerobic biodegradation of trichlorophenol (TCP). We hypothesized that specific combinations of environmental factors determine phylogenetic diversity and play important roles in the decomposition and stability of TCP-biodegrading bacteria. The anaerobic bioreactor was operated at 35 °C (H condition) or 30 °C (L condition) and mainly fed with TCP (from 28 μM to 180 μM) and organic material. Metagenome sequencing was combined with 16S rRNA gene amplicon sequencing for the microbial community analysis. The results exhibited that the property of robustness occurred in specific conditions. The corresponding co-occurrence and diversity patterns suggest high collectivization, degree and evenness for robust communities. Two types of core functional taxa were recognized: dechlorinators (unclassified Anaerolineae, Thermanaerothrix and Desulfovibrio) and ring-opening members (unclassified Proteobacteria, Methanosarcina, Methanoperedens, and Rubrobacter). The deterministic process of the expansion of niche of syntrophic bacteria at higher temperatures was confirmed. The reductive and hydrolytic dechlorination mechanisms jointly lead to C-Cl bond cleavage. H ultimately adapted to the stress of high TCP loading, with more abundant ring-opening enzyme (EC 3.1.1.45, ∼55%) and hydrolytic dechlorinase (EC 3.8.1.5, 26.5%) genes than L (∼47%, 10.5%). The functional structure (based on KEGG) in H was highly stable despite the high loading of TCP (up to 60 μM), but not in L. Furthermore, an unknown taxon with multiple functions (dechlorinating and ring-opening) was found based on genetic sequencing; its functional contribution of EC 3.8.1.5 in H (26.5%) was higher than that in L (10.5%), and it possessed a new metabolic pathway for biodegradation of halogenated aromatic compounds. This new finding is supplementary to the robust mechanisms underlying organic chlorine biodegradation, which can be used to support the engineering, regulation, and design of synthetic microbiomes.

Controlling bacterial biofilm formation by native and methylated lupine 11S globulins

The antibacterial and anti-biofilm activities of the 11S globulins isolated from lupin seeds (Lupinus termis), and its methylated derivative (M11S), were investigated against seven pathogenic gram-positive and gram-negative bacteria. The MIC of 11S ranged from 0.1 to 4.0 μg/ml against 0.025 to 0.50 μg/ml for M11S, excelling some specific antibiotics. The MICs of M11S were 40-80 times lower than some specific antibiotics against gram-positive bacteria and 2-60 times lower than some specific antibiotics against gram-negative bacteria. One MIC of 11S and M11S highly reduced the liquid growth of all tested bacteria during 24 h at 37°C. They also inhibited biofilm formation by 80%-86% and 85%-94%, respectively (gram-positive), and 29%-44% and 43%-50%, respectively (gram-negative). M11S prevented biofilm formation by gram-positive bacteria at minimum biofilm inhibitory concentration (MBIC), 0.025-0.1 μg/ml against 0.1-0.5 μg/ml for gram-negative bacteria, i.e., 4-20 times and 4-7 times anti-biofilm inhibitory action compared with 11S, respectively. Biofilm formation of two bacteria revealed no adhered cells on glass slides for 24 h at 37°C, i.e., was entirely prevented by one MBIC of 11S and M11S. Scanning electron microscopy indicated microbial biofilm deformation under the action of 11S and M11S, indicating their broad specificity and cell membrane-targeted action.

Acorus calamus recycled as an additional carbon source in a microbial fuel cell-constructed wetland for enhanced nitrogen removal

Acorus calamus was recycled as an additional carbon source in microbial fuel cell-constructed wetlands (MFC-CWs), for efficient nitrogen removal of low carbon wastewater. The pretreatment methods, adding positions, and nitrogen transformations were investigated. Results indicated that alkali-pretreatment cleaved the benzene rings in dominant released organics, producing chemical oxygen demand of 164.5 mg from per gram of A. calamus. Pretreated biomass addition in the anode of MFC-CW attained the maximum total nitrogen removal of 97.6% and power generation of 12.5 mW/m², which were higher than those with biomass in the cathode (97.6% and 1.6 mW/m², respectively). However, the duration of a cycle with biomass in the cathode (20-25 days) was longer than that in the anode (10-15 days). Microbial metabolisms related to organics degradation, nitrification, denitrification, and anammox were intensified after biomass recycling. This study provides a promising method to improve nitrogen removal and energy recovery in MFC-CWs.

Deciphering the fate of osmotic stress priming on enhanced microorganism acclimation for purified terephthalic acid wastewater treatment with high salinity and organic load

Osmotic stress priming (OSP) was an effective management strategy for improving microbial acclimation to salt stress. In this study, the interaction between pollutants and microbiota, and microbial osmoregulation were investigated triggered by OSP (alternately increasing salinity and organic loading). Results showed that OSP significantly improved COD removal from 31.53 % to 67.99 % and mitigated the terephthalate inhibition produced by toluate, decreasing from 1908.08 mg/L to 837.16 mg/L compared with direct priming. Due to an increase in salinity, Pelotomaculum and Mesotoga were enriched to facilitate terephthalate degradation and syntrophic acetate oxidation (SAO). And organic load promoted acetate formation through syntrophic metabolism of Syntrophorhabdus/Pelotomaculum and SAO-dependent hydrogenotrophic methanogenesis. K⁺ absorbing, proline and trehalose synthesis participated in osmoregulation at 0.5 % salinity, while only ectoine alleviated intracellular osmolarity under 1.0 % salinity with OLR of 0.44 kg COD /m³. This study provided in-depth insight for microbial acclimation process of anaerobic priming of saline wastewater.

Aerobic granular sludge treating hypersaline wastewater: Impact of pH on granulation and long-term operation at different organic loading rates

pH is one of the major parameters that influence the granulation and long-term operation of aerobic granular sludge (AGS). In hypersaline wastewater, the impact of pH on granulation and the extent of organic loading rate (OLR) that AGS can withstand under different pH are still not clear. In this study, AGS was cultivated at 3% salinity in three sequencing batch reactors with influent pH values of 5.0, 7.0, and 9.0, respectively, and the OLR was stepwise increased from 2.4 to 16.8 kg COD/m³·d after the granules maturation. The results showed the satisfactory granulation and organic removal under different influent pH conditions, in which the granulation was completed on day 43, 23, and 23, respectively. Neutral influent was the most appropriate for development of salt-tolerant aerobic granular sludge (SAGS), while acidic environment induced the formation of fluffy filamentous granules, and alkaline environment weakened the granule stability. Metagenomic analysis revealed the similar microbial community of neutral and alkaline conditions, with the predominance of genus Paracoccus_f__Rhodobacteraceae. While in acidic environment, fungus Fusarium formed the skeleton of filamentous granules and functioned as the carrier of bacteria including Azoarcus and Pararhodobacter. With the elevation of OLR, SAGSs were found to maintain the compact structure under OLRs of 2.4, 7.2, and 2.4 kg COD/m³·d, and obtain high TOC removal (>95.0%) under OLRs of 7.2, 14.4, and 14.4 kg COD/m³·d, respectively. For hypersaline high-strength organic wastewater, satisfactory TOC removal could also be obtained at broad pH ranges (5.0-9.0), in which neutral environment was the most suitable and acidic environment was the worst. This study contributed to a better understanding of SAGS granulation and treatment of hypersaline high-strength organic wastewater with different pH values.

Bioaugmentation of intertidal sludge enhancing the development of salt-tolerant aerobic granular sludge

Three parallel bioreactors were operated with different inoculation of activated sludge (R1), intertidal sludge (ItS) (R2), and ItS-added AS (R3), respectively, to explore the effects of ItS bioaugmentation on the formation of salt-tolerant aerobic granular sludge (SAGS) and the enhancement of COD removal performance. The results showed that compared to the control (R1-2), R3 promoted a more rapid development of SAGS with a cultivation time of 25 d. Following 110-day cultivation, R3 exhibited a higher granular diameter of 1.3 mm and a higher hydrophobic aromatic protein content than that in control. Compared to the control, the salt-tolerant performance in R3 was also enhanced with the COD removal efficiency of 96.4% due to the higher sludge specific activity of 14.4 g·gVSS^-1·d^-1 and the salinity inhibition constant of 49.3 gL^-1. Read- and genome-resolved metagenomics together indicated that a higher level of tryptophan/tyrosine synthase gene (trpBD, tyrBC) and enrichment of the key gene hosts Rhodobacteraceae, Marinicella in R3, which was about 5.4-fold and 1.4-fold of that in control, could be the driving factors of rapid development of SAGS. Furthermore, the augmented salt-tolerant potential in R3 could result from that R1 was dominated by Rhodospirillaceae, Bacteroidales, which carried more trehalose synthase gene (otsB, treS), while the dominant members Rhodobacteraceae, Marinicella in R3 were main contributors to the glycine betaine synthase gene (ectC, betB, gbsA). This study could provide deeper insights into the rapid development and improved salt-tolerant potential of SAGS via bioaugmentation of intertidal sludge, which could promote the application of hypersaline wastewater treatment.

Metagenomic insights into microbial nitrogen metabolism in two-stage anoxic/oxic-moving bed biofilm reactor system with multiple chambers for municipal wastewater treatment

To explore the microbial nitrogen metabolism of a two-stage anoxic/oxic (A/O)-moving bed biofilm reactor (MBBR), biofilms of the system's chambers were analyzed using metagenomic sequencing. Significant differences in microbial populations were found among the pre-anoxic, oxic and post-anoxic MBBRs (P < 0.01). Nitrospira and Nitrosomonas had positive correlations with ammonia nitrogen (NH₄⁺-N) removal, and were also predominant in oxic MBBRs. These organisms were the hosts of functional genes for nitrification. The denitrifying genera were predominant in anoxic MBBRs, including Thiobacillus and Sulfurisoma in pre-anoxic MBBRs and Dechloromonas and Thauera in post-anoxic MBBRs. The four genera had positive correlations with total nitrate and nitrite nitrogen (NO_X^--N) removal and were the hosts of functional genes for denitrification. Specific functional biofilms with different microbial nitrogen metabolisms were formed in each chamber of this system. This work provides a microbial theoretical support for the two-stage A/O-MBBR system.

Bio-Fenton-Assisted Biological Process for Efficient Mineralization of Polycyclic Aromatic Hydrocarbons from the Environment

The intensive production of fossil fuels has led to serious polycyclic aromatic hydrocarbon (PAH) contamination in water and soil environments (as PAHs are typical types of emerging contaminants). Bio-Fenton, an alternative to Fenton oxidation, which generates hydrogen peroxide at a nearly neutral pH condition, could ideally work as a pretreatment to recalcitrant organics, which could be combined with the subsequent biological treatment without any need for pH adjustment. The present study investigated the performance of a Bio-Fenton-assisted biological process for mineralization of three typical types of PAHs. The hydrogen peroxide production, PAH removal, overall organic mineralization, and microbial community structure were comprehensively studied. The results showed that the combined process could achieve efficient chemical oxygen demand (COD) removal (88.1%) of mixed PAHs as compared to activated sludge (33.1%), where individual PAH removal efficiencies of 99.6%, 83.8%, and 91.3% were observed for naphthalene (NAP), anthracene (ANT), and pyrene (PYR), respectively, with the combined process.