Ammonium stress promotes the conversion to organic nitrogen and reduces nitrogen loss based on restructuring of bacterial communities during sludge composting

Reversing inhibition to promotion in phenol-ammonium metabolism via algal-microbial fuel cell: Mechanisms of phenol-ammonium interaction and synergistic removal

Addressing the challenge of metabolic inhibition between phenol and ammonium in coal gasification wastewater (CGW), this study introduced a novel algal-microbial fuel cell (AMFC). It combined the advantages of electroactive bacteria and Synechocystis to achieve synergistic metabolism, establishing a cooperative mechanism for pollutant separation and enhanced transformation to achieve the mutual promotion of phenol and ammonium removal. Remarkably, raising phenol to 1500 mg COD/L boosted ammonium removal by 31.51 % in AMFC, due to a consistently higher potential difference than the control, which enhanced extracellular electron transfer (EET) via conductive nanowire and drove ammonium migration. Similarly, elevating ammonium concentration to 150 mg/L resulted in an 11.79 % increase in phenol removal efficiency, driven by superior solution conductivity and EET, as well as more electron acceptors (oxygen) from the algal cathode. This system challenged the conventional understanding of the antagonistic relationship between phenol and ammonium. Under high phenol conditions, the electroactive bacteria Clostridium sensu stricto 1 and Acinetobacter, Perlucidibaca formed a synergistic metabolic network, whereas Zoogloea, Ideonella, and other phenol-degrading bacteria were significantly enriched in high ammonium environments. The AMFC represented a breakthrough in reversing the metabolic inhibition between phenol and ammonium, providing a novel and energy-efficient strategy for treating complex industrial wastewater.

Unveiling the nitrogen metabolism mechanism for nitrogen retention in compost via in-situ ammonia recycling strategy

A large amount of ammonia volatilization in compost causes environmental pollution and reduces the quality of compost. Ammonia recycling composting strategy (ARCS) is new strategy for reducing ammonia volatilization by absorbing with backfilling ammonia into the compost. This study revealed the mechanism of ARCS on ammonia volatilization and nitrogen retention during chicken manure composting. The results showed that the adsorption layer containing wood vinegar had an obvious inhibition effect on ammonia volatilization. Compared to CK, ARCS treatment could reduce ammonia emissions and nitrogen loss by 20.65% and 39.6% with T3 (12d), respectively. Different adsorption time would affect the occurrence of various nitrogen components in the adsorption layer, especially the change of inorganic nitrogen content. Metagenomic analysis showed that ARCS treatment resulted in significant changes in bacterial communities, and different backfilling times had significant effects on nitrogen metabolism pathways in compost. Glutamate dehydrogenase and glutamate synthase were the key nitrogen metabolism processes during composting, which played an important role in ammonia volatilization and nitrogen retention. The suitable backfilling time (12d) promoted the acceleration of ammonia nitrogen metabolism in the early stage of composting and enhanced the ammonia assimilation and dissimilatory nitrate reduction function in the maturation stage to achieve nitrogen retention. This study provided valuable insights into the effects of in-situ ammonia absorption and backfilling on nitrogen metabolism pathways during composting.

Confirming the key factors influencing the biosynthesis and regulation of organic nitrogen in composting

Organic nitrogen (ON) possesses the ability to sustain a stable nitrogen supply fertility during composting. However, research on the biosynthesis and regulation of ON remains limited. The results indicated that despite variations in microbial communities between the chicken manure composting (T group) and kitchen waste digestate composting (F group), their functional genes were remarkably similar, and the microorganisms exhibited similar functions. The microbial community structure of T group was more complex than that of F group. Network analysis identified Saccharomonospora, Corynebacterium, and Thermobifida as the core microorganisms in T group, whereas Oceanobacillus, Staphylococcus, and Fictibacillus were predominant in F group. These microorganisms play a role in the biosynthesis and regulation of various forms of ON (including amino acid nitrogen (AAN), amino sugar nitrogen (ASN), amide nitrogen (AN) and hydrolyzable unknown nitrogen (HUN)) and may contribute to differences in ON production due to the distinct nature of the materials. The core functional genes of the two groups of materials were determined by random forest model. Although differences in functional genes were present between F group and T group, the most crucial genes for ON biosynthesis in both groups were those with ammonia assimilation (such as glnE, gltB, gltD, etc.). The nitrogen transformation processes associated with these core genes can be modulated by managing the activity of multifunctional microorganisms, particularly through the control of ammonia assimilation, nitrate reduction, and ammonification, which are related to NH4+ levels. Notably, electric conductivity (EC), temperature (Tem.), pH, and NH4+ were the pivotal environmental factors influencing the biosynthesis of ON. This investigation enhances our understanding of the previously underexplored mechanisms of ON biosynthesis and regulation.

Efficient conversion of corn straw to feed protein through solid-state fermentation using a thermophilic microbial consortium

Solid-state fermentation of lignocellulosic waste to produce feed protein is a means of realising solid waste. However, low efficiency and susceptibility to microbial contamination remain significant challenges in feed protein production through room-temperature solid-state fermentation. In this study, thermophilic microbiomes were enriched. After adaptive and nitrogen acclimation, microbiomes with the combined functions of 'thermophilic-rapid decomposition-nitrogen conversion' were obtained and used for feed protein production. High-throughput sequencing and Kyoto Encyclopedia of Genes and Genomes metabolic pathway prediction techniques were used to assess the mechanisms underlying microbial involvement in substance conversion. The results showed that the microbiomes decomposed 78.21 %-81.73 % of straw within 7 days. After nitrogen acclimation, the nitrogen utilisation rate and the true protein content of the microbiomes improved by 19.22 %-26.96 % and 56.14 %-71.99 %, respectively. Fed-batch enzymatic saccharification and fermentation reduced the fermentation time by 28.5 %. Domesticated microbiomes increased the abundance of bacteria and fungi in the fermentation system, enhancing carbon metabolism and the urea cycle. This study presents a novel approach for the high-value utilisation of lignocellulose waste.

Dual mechanism of membrane covering on GHG and NH3 mitigation during industrial-scale experiment on dairy manure composting: Inhibiting formation and blocking emissions

An industrial-scale experiment on dairy manure composting with the control group (Ctrl) and the membrane covering group (CM) was conducted to explore the effects of functional membrane covering on gas emissions, the conversion of carbon and nitrogen, and revealing the underlying mechanisms. Results indicated that CM achieved the synergistic effects on gas mitigation and improved compost product quality. CO2, CH4, N2O, and NH3 emissions were reduced by 81.8%, 87.0%, 82.6%, and 82.2%, respectively. The micro-aerobic condition formed in membrane covering compost pile together with the covering inhibiting effect dominated the mitigation effect. CM significantly downregulated the mcrA gene copies and the value of mcrA/pmoA (p < 0.01), which reduced CH4 emission. CM decreased the nirS and nirK gene copies and increased the nosZ gene copies to reduce N2O emission. Functional Annotation of Prokaryotic Taxa showed that membrane covering effectively amended part of carbon and nitrogen cycles, which stimulated the degradation of organic matter, accelerated compost maturity and reduced the gaseous emissions.

Deciphering the roles of nitrogen source in sharping synchronous metabolic pathways of linear alkylbenzene sulfonate and nitrogen in a membrane biofilm for treating greywater

Nitrogen (N) source is an important factor affecting biological wastewater treatment. Although the oxygen-based membrane biofilm showed excellent greywater treatment performance, how N source impacts the synchronous removal of organics and N is still unclear. In this work, how N species (urea, nitrate and ammonia) affect synchronous metabolic pathways of organics and N were evaluated during greywater treatment in the membrane biofilm. Urea and ammonia achieved efficient chemical oxygen demand (>97.5%) and linear alkylbenzene sulfonate (LAS, >98.5%) removal, but nitrate enabled the maximum total N removal (80.8 ± 2.6%). The nitrate-added system had poor LAS removal ratio and high residual LAS, promoting the accumulation of effluent protein-like organics and fulvic acid matter. N source significantly induced bacterial community succession, and the increasing of corresponded functional flora can promote the transformation and utilization of microbial-mediated N. The nitrate system was more conducive to the accumulation of denitrification related microorganisms and enzymes, enabling the efficient N removal. Combining with high amount of ammonia monooxygenase that contributing to LAS and N co-metabolism, LAS mineralization related microbes and functional enzymes were generously accumulated in the urea and ammonia systems, which achieved the high efficiency of organics and LAS removal.

Comparative effects of ammonium nitrogen on perchlorate degradation performance under heterotrophic condition with different carbon sources

Perchlorate (ClO4-) mainly exists in the form of ammonium perchlorate in industrial production. However, the degradation mechanisms of different concentrations of ammonium nitrogen (NH4+-N) and ClO4- mixed pollutants in the environment are not well understood. This study aims to explore the potential of different types of carbon sources for ClO4- and NH4+-N biodegradation. Experimental results showed that the concentration and type of carbon sources are decisive to simultaneous removal of NH4+-N and ClO4-. Under condition of C(COD)/C(ClO4-) ratio of 21.15 ± 4.40, the simultaneously removal efficiency of ClO4- and NH4+-N in acetate (Ace) was relatively higher than that in methanol (Met). C(NH4+-N)/C(ClO4-) ratio of 9.66 ± 0.51 and C(COD)/C(ClO4-) ratio of 2.51 ± 0.87 promoted ClO4- reduction in glucose-C (Glu-C). However, high concentration of Glu could cause pH decrease (from 7.57 to 4.59), thereby inhibiting ClO4- reduction. High-throughput sequencing results indicated that Proteobacteria and Bacteroidetes have made a major contribution to the simultaneous removal of NH4+-N and ClO4-. They are two representative bacterial phyla for participating in both ClO4- reduction and denitrification. Notably, the abundance of main ClO4- degrading bacteria (such as Proteobacteria, Chloroflexi, and Firmicutes) significantly increased by 528.57 % in Glu-C. It can be inferred that the concentration of carbon source and NH4+-N were the most important factors determining the removal efficiency of ClO4- by influencing changes in the core microbial community. This study will provide new techniques and mechanistic insights for the simultaneous removal of mixed ClO4- and nitrogen pollutants, which can also provide theoretical support for innovation in future biological treatment processes.

Impact of Temperature Elevation on Microbial Communities and Antibiotic Degradation in Cold Region Soils of Northeast China

This study systematically investigated the effects of temperature changes on the degradation of antibiotics in soil, as well as the alterations in microbial community structure and aggregation, through a field warming experiment in a greenhouse. Compared to non-warming soil, the warming treatment significantly accelerated the degradation rate of tetracyclines during soil freezing and mitigated the impact of environmental fluctuations on soil microbial communities. The greenhouse environment promoted the growth and reproduction of a wide range of microbial taxa, but the abundance of Myxococcota was positively correlated with antibiotic concentrations in both treatments, suggesting a potential specific association with antibiotic degradation processes. Long-term warming in the greenhouse led to a shift in the assembly process of soil microbial communities, with a decrease in dispersal limitation and an increase in the drift process. Furthermore, co-occurrence network analysis revealed a more loosely structured microbial community in the greenhouse soil, along with the emergence of new characteristic taxa. Notably, more than 60% of the key taxa that connected the co-occurrence networks in both groups belonged to rare taxa, indicating that rare taxa play a crucial role in maintaining community structure and function.

Solid-state fermentation of corn straw using synthetic microbiome to produce fermented feed: The feed quality and conversion mechanism

Straw is a typical biomass resource which can be converted into high nutritional value feed via microbial fermentation. The degradation and conversion of straw using a synthetic microbial community (SMC-8) was functionally investigated to characterise its nitrogen conversion and carbon metabolism. Four species of bacteria were found to utilise >20 % of the inorganic nitrogen within 15 h, and the ratio of the diameter of fungal transparent circles (D) to the diameter of the colony (d) of the four fungal species was >1. Solid-state fermentation of corn straw increased the total amino acid (AA) content by 41.69 %. The absolute digestibility of fermented corn straw dry weight (DW) and true protein was 34.34 % and 45.29 %, respectively. Comprehensive analysis of functional proteins revealed that Aspergillus niger, Trichoderma viride, Cladosporium cladosporioides, Bacillus subtilis and Acinetobacter johnsonii produce a complex enzyme system during corn straw fermentation, which plays a key role in the degradation of lignocellulose. This study provided a new insight in utilizing corn straw.

Enhancing bioavailable carbon sources and minimizing ammonia emissions in distillery sludge and distiller's grains waste co-composting through deep eutectic solvent addition

This study introduced two deep eutectic solvents, ChCl/oxalic acid (CO) and ChCl/ethylene glycol (CE), into a 34-day co-composting process of distillery sludge and distiller's grains waste to address challenges related to NH3 emissions. The addition of DES increased dissolved organic carbon by 68% to 92%, offering more utilizable carbon for microorganisms. SYTO9/PI staining and enzyme activity tests showed the CE group had higher bacterial activity and metabolic levels during the thermophilic phase than the control. Bacterial community analysis revealed that early dominance of Lactobacillus and Lysinibacillus in CE accelerated the onset of the thermophilic phase, reduced pile pH, and significantly decreased urease production by reducing Ureibacillus. Consequently, CE treatment substantially dropped NH3 emissions by 73% and nitrogen loss by 54%. Besides, CE fostered a more abundant functional microbial community during the cooling and maturation phases, enhancing deep degradation and humification of organic matter.

Incorporating microbial inoculants to reduce nitrogen loss during sludge composting by suppressing denitrification and promoting ammonia assimilation

To address the challenge of increasing nitrogen retention in compost, this study investigated the effects of microbial communities on denitrification and ammonia assimilation during sludge composting by inoculating microbial inoculants. The results showed that the retention rates of total Kjeldahl nitrogen (TKN) and humic acid (HA) in MIs group (with microbial inoculants) were 4.94 % and 18.52 % higher than those in the control group (CK), respectively. Metagenomic analysis showed that Actinobacteria and Proteobacteria were identified as main microorganisms contributing to denitrification and ammonia assimilation. The addition of microbial agents altered the structure of the microbial community, which in turn stimulated the expression of functional genes. During cooling period, the ammonia assimilation genes glnA, gltB and gltD in MIs were 15.98 %, 24.84 % and 32.88 % higher than those in CK, respectively. Canonical correspondence analysis revealed a positive correlation between the dominant bacterial genera from the cooling stage to the maturity stage and the levels of NO3--N, NH4+-N, HA, and TKN contents. NH4+-N was positively correlated with HA, indicating NH4+-N might be incorporated into HA. Heat map and network analyses revealed NH4+-N as a key factor affecting functional genes of denitrification and ammonia assimilation, with Nitrospira identified as the core bacteria in the microbial network. Therefore, the addition of microbial agents could increase nitrogen retention and improve compost product quality.

Accelerating the humification of mushroom waste by regulating nitrogen sources composition: Deciphering mechanism from bioavailability and molecular perspective

Regulating nitrogen source composition is efficient approach to accelerate the spent mushroom substrate (SMS) composting process. However, currently, most traditional composting study only focuses on total C/N ratio of initial composting material. Rarely research concerns the effect of carbon or nitrogen components at different degradable level and their corresponding decomposed-substances on humification process. This study deciphers and compares the mechanism of mixed manure-N sources on SMS humification from bioavailability and molecular perspective. Two different biodegradable manure-N sources, cattle manure (CM) and Hainan chicken manure (CH), were added into the SMS composting with the different CM:CH ratio of 1:0, 3:1, 1:1, 1:3, and 0:1, respectively. The physicochemical properties and humic substances were determined to evaluate the compost quality. Coupling analysis of spectroscopy, fluorescence, and humic intermediate precursors were conducted to characterizing molecular formation process of humic acid (HA). The results indicated that regulating the carbon-nitrogen nutrient biodegradability of composting material by adding mixed nitrogen sources is an effective strategy to accelerate the SMS humification process. The C1H3 (CM:CH ratio of 1:3) and CH treatments obtained great physicochemical properties and the highest growth rate of HA (31.96% and 27.02%, respectively). The rapid reaction of polysaccharide, ketone, quinone, and amide in DOM (LCP1) might be the key for the fast humification in C1H3 and CH. The polyphenol, reducing sugar and amino acid originated from the labile-carbon-proportion I (LCP1) and recalcitrant-carbon-proportion (RCP), labile-carbon-proportion II (LCP2) and RCP, and labile-nitrogen-proportion I (LNP1), respectively, were the main driving intermediate precursors for the formation of HA. This study deciphers the SMS humification mechanism at molecular level and provides a strategy in accelerating-regulating the composting process. which will be beneficial for enhancing the disposing efficiency of SMS, producing high-quality organic fertilizer, and even popularizing to the similar types of organic waste in practical field.

Insight into the pathways of biochar/smectite-induced humification during chicken manure composting

As representative organic and inorganic additives, both biochar and smectite exhibit an excellent capacity to improve humification efficiency during composting. Nevertheless, the mechanisms underlying biochar/smectite-induced compost humification have still not been fully explored from the perspective of overall organic substances. In this study, three composting treatments were performed as follows: 10 % biochar-amended composting, 10 % smectite-amended composting and natural composting without any additive. UV-visible parameters and synchronous hetero two-dimensional correlation spectra showed that biochar accelerated dissolved organic matter (DOM) complications, unsaturation and aromatization. For example, biochar promoted the C2 and simple C3 peaks to convert into a sophisticated C3/360 peak. However, the effect of smectite was negligible in complicating the DOM structure. Both biochar and smectite displayed an invigorating role in promoting humic substance (HS) formation. The strengthened relations between bacterial richness and physicochemical indicators and HS fractions might contribute to the positive action of biochar/smectite on HS synthesis. Network analysis showed that both bacterial functional omnipotence and specialization in response to the addition of catalysts may contribute to compost humification. The chemical pathway involved in DOM humification was intensified by enhancing the role of pH in biochar composting and weakening the degradation of unsaturated aromatic compounds of DOM with smectite addition. These findings benefit the practical application of biochar/smectite in promoting composting efficiency.

Macrogenomic analysis of the effects of aqueous-phase from hydrothermal carbonation of sewage sludge on nitrogen metabolism pathways and associated bacterial communities during composting

The effects of aqueous phases (AP) formed from hydrothermal carbonation of sewage sludge (with or without rice husk) as moisture regulators of nitrogen metabolism pathways during composting are currently unclear. Macrogenomic analyses revealed that both APs resulted in notably changes in bacterial communities during composting; increased levels of nitrogen assimilation, nitrification, and denitrification metabolic pathways; and decreased levels of nitrogen mineralization metabolic pathways. Genes associated with nitrogen assimilation and mineralization accounted for 34-41% and 32-40% of the annotated reads related to nitrogen cycling during composting, respectively, representing them as the most abundant nitrogen metabolism processes. The gudB and norB were identified as key genes for nitrogen mineralization and nitrous oxide emission, respectively. This research offers a better understanding of the effects of additional nitrogen sources on nitrogen metabolism pathways during composting.

Nitrogen evolution during membrane-covered aerobic composting: Interconversion between nitrogen forms and migration pathways

Aerobic composting is a promising technology for converting manure into organic fertilizer with low capital investment and easy operation. However, the large nitrogen losses in conventional aerobic composting impede its development. Interconversion of nitrogen species was studied during membrane-covered aerobic composting (MCAC) and conventional aerobic composting, and solid-, liquid-, and gas-phase nitrogen migration pathways were identified by performing nitrogen balance measurements. During the thermophilic phase, nitrogenous organic matter degradation and therefore NH3 production were faster during MCAC than uncovered composting. However, the water films inside and outside the membrane decreased NH3 release by 13.92%-22.91%. The micro-positive pressure environment during MCAC decreased N2O production and emission by 20.35%-27.01%. Less leachate was produced and therefore less nitrogen and other pollutants were released during MCAC than uncovered composting. The nitrogen succession patterns during MCAC and uncovered composting were different and NH4+ storage in organic nitrogen fractions was better facilitated during MCAC than uncovered composting. Overall, MCAC decreased total nitrogen losses by 33.24%-50.07% and effectively decreased environmental pollution and increased the nitrogen content of the produced compost.

A novel composting system for mitigating ammonia emissions and producing nitrogen-rich organic fertilizer

Ammonia emissions not only lead to environmental pollution but also reduce the quality of compost products. Here, a novel composting system (condensation return composting system, CRCS) was designed for mitigating ammonia emissions. The results showed that the CRCS reduced ammonia emissions by 59.3% and increased the total nitrogen content by 19.4% compared with the control. By integrating the results of nitrogen fraction conversion, ammonia-assimilating enzyme activity, and structural equation modeling, it was found that the CRCS facilitated the conversion of ammonia to organic nitrogen by stimulating ammonia-assimilating enzyme activity and ultimately retained nitrogen in the compost product. Moreover, the pot experiment confirmed that nitrogen-rich organic fertilizer produced by the CRCS significantly increased the fresh weight (45.0%), root length (49.2%), and chlorophyll content (11.7%) of pakchoi. This study provides a promising strategy for mitigating ammonia emissions and producing nitrogen-rich organic fertilizer with high agronomic value.