Producing volatile fatty acids and polyhydroxyalkanoates from foods by-products and waste: A review

Genomic insights into Marinobacterium sediminicola CGMCC 1.7287T: A polyhydroxyalkanoate-producing bacterium isolated from marine sediment

Polyhydroxyalkanoate (PHA) is a promising polyester with superior properties including biodegradability, biocompatibility, and biorenewability. Marinobacterium sediminicola CGMCC 1.7287T, isolated from marine sediment in the East China Sea, has been found capable of producing PHA using volatile fatty acids as cost-effective substrates. Here, we report the genomic characteristics of M. sediminicola CGMCC 1.7287T, which possesses a circular chromosome of 3,554,135 bp with a GC content of 56.10 %. Gene annotation analysis revealed that the bacterium harbors enzymes involved in volatile fatty acids utilization, PHA synthesis, and ectoine accumulation. The presence of genes associated with ectoine synthesis suggests that this bacterium has stress resistance and cellular protection mechanism to adapt to saline environments. The genomic features provide important references for further genetic engineering of marine bacteria to effectively utilize volatile fatty acids for PHA production and enhance stress tolerance through ectoine accumulation.

Pilot-Scale Acidogenic Fermentation of Reground Pasta Byproduct for Polyhydroxyalkanoate Production with Mixed Microbial Cultures

The production of polyhydroxyalkanoates (PHAs) has been herein investigated by using an organic acid mixture originated from a pilot-scale acidogenic fermentation (AF) of reground pasta (RP) byproduct. The pilot-scale AF process was conducted either under no pH control or with the pH maintained at a value of 5.90, with the two obtained fermented mixtures termed RP-fermented 1 and RP-fermented 2, respectively. The fermented mixtures were fed to a lab-scale sequencing batch reactor (SBR), operated at short hydraulic retention time (HRT, 0.5 days) and sludge retention time (SRT, 1 day) and at two values of the applied organic loading rate (OLR) of 2.12 gCODACIDS/Ld and 4.25 gCODACIDS/Ld. During all of the SBR operating conditions, a high selective microbial pressure was established, as confirmed by both the microbiology analysis and the detected values of the storage yield (which reached a maximum value of 0.68 ± 0.04 CODPHA/CODACIDS). A poly(hydroxybutyrate/hydroxyvalerate) copolymer and a poly(hydroxybutyrate/hydroxyvalerate/hydroxyhexanoate) terpolymer were produced with the RP-fermented 1 and RP-fermented 2 streams, respectively. When the OLR of 2.12 gCODACIDS/Ld was applied to the SBR, the stored copolymer and terpolymer presented very similar molecular weights of 339 and 389 kDa, respectively.

One-Pot lignin bioconversion to polyhydroxyalkanoates based on hierarchical utilization of heterogeneous compounds

Pseudomonas putida degraded 35 % of compounds in alkali-pretreated lignin liquor under nitrogen-replete conditions but with low polyhydroxyalkanoates (PHA) production, while limiting nitrogen supplement improved PHA content (PHA/dry cell weight) to 43 % at the expense of decreased lignin degradation of 22 %. Increase of initial cell biomass (0.1-1.5 g/L) monotonically improved the lignin degradation from 22 % to 33 % under nitrogen-limited conditions. Hierarchical utilization of heterogenous compounds under cell growth restricted conditions has been unveiled - simple carbon sources were prioritized for valorization, followed by aromatic compounds bioconversion. Based on the results of hierarchy and leveraging the initial bacterial biomass, acetate was augmented to facilitate one-pot lignin bioconversion under nitrogen-limited conditions. This approach improved lignin bioconversion closer to its upper degradation limit of 35 %, concomitant with PHA yield of 39 mg/g-lignin. Anaerobic digestion of lignocellulose was redesigned to favor acetate-type fermentation, with acetate constituting 91 wt%, providing an economic source of acetate.

Unlocking new electron transport routes: Insights into enhanced long-chain fatty acid conversion in valorization of lipid-rich waste

In this study, the alkaline fermentation of combined lipid-rich waste (LRW) was explored to produce volatile fatty acids (VFAs). By introducing sulfate as an external electron acceptor, the long-chain fatty acid (LCFA) metabolic pathway was enhanced, achieving a VFA yield of 671.1 ± 21.9 mg COD/g VSS-an increase of 4.7 times compared to the control-under conditions of high lipid content (10 g/L). Significant conversion of LCFAs, such as oleic and linolenic acids, was achieved via the β-oxidation pathway, which also led to a synergistic enhancement of the fermentation of non-lipidic organic matter. Key functional genes from five LCFA metabolic modules were identified, revealing diverse electron transport routes, including non-syntrophic and syntrophic LCFA oxidation mediated by differentiated microbial function groups. Genome-centric metagenomics analysis further identified microbial functional groups responsible for the reconstructed pathways, offering new insights into optimizing LRW recycling and VFA production in anaerobic fermentation systems.

Non-invasive and real-time monitoring of polyhydroxyalkanoates production using two-dimensional fluorescence spectroscopy

Bioplastics are a sustainable and environmental-friendly alternative to the conventional petroleum-based plastics, namely due to their source (biobased) and due to their biodegradability or both. Polyhydroxyalkanoates (PHA) stand out among the bioplastics group by being intracellular biobased, biodegradable and biocompatible polymers. PHA production has been highly investigated during the last decades. However, to date, PHA production has been monitored through offline and time-consuming tools, involving hazardous solvents, not allowing a timely control of the bioprocesses, which often results in a loss of process productivity and hinders its implementation at full scale. Therefore, two-dimensional (2D) fluorescence spectroscopy was assessed for monitoring the PHA content at real-time, as it is a non-destructive, solvent-free and non-invasive technique. The complex information of the biological broth was captured within fluorescence excitation-emission matrices (EEMs), which were deconvoluted through projection to latent structures (PLS) modelling to estimate PHA production by an enriched PHA microbial culture, using fermented brewer's spent grain as feedstock. A good correlation for PHA prediction was achieved, with an average error of ca. 4.0% gPHA/gTS for new predictions. This work demonstrates the great potential of using 2D fluorescence spectroscopy to assess the intracellular PHA content without requiring staining agents. Moreover, it unlocks the possibility of an online and real-time monitoring of the biopolymer production processes, which will contribute towards the improvement of the PHA process productivity and, consequently, its implementation at full scale.

Optimisation of the biological production of levulinic acid in a mixed microbial culture fed with synthetic grape pomace

Levulinic acid (LA) is a polymer with a vast industrial application range and can be co-produced as a minor by-product during the biological production of polyhydroxyalkanoates (PHA). However, the influence of key parameters as tools for favouring the production of LA over PHA is still unclear. In this study, we investigated how several critical operational conditions, i.e., carbon-nitrogen ratio (C/N), organic loading rate (OLR) and airflow, can be optimised to favour LA accumulation over PHA production by a mixed microbial culture (MMC), using synthetic grape pomace (GP) hydrolysate as the substrate. The results showed that it was possible to direct the MMC towards LA accumulation instead of PHA. The maximum LA yield was 2.7 ± 0.2 g LA/(L·d) using a C/N of 35, an airflow of 5 L/min and an OLR of 4 g sCOD/(L·d). The OLR and, to a lesser extent, the C/N ratio were the main factors significantly and positively correlated with the biological synthesis of LA.

Impact of Acetic Acid Supplementation in Polyhydroxyalkanoates Production by Cupriavidus necator Using Mixture-Process Design and Artificial Neural Network

The trend in bioplastic application has increased over the years where polyhydroxyalkanoates (PHAs) have emerged as a potential candidate with the advantage of being bio-origin, biodegradable, and biocompatible. The present study aims to understand the effect of acetic acid concentration (in combination with sucrose) as a mixture variable and its time of addition (process variable) on PHA production by Cupriavidus necator. The addition of acetic acid at a concentration of 1 g l-1 showed a positive influence on biomass and PHA yield; however, the further increase had a reversal effect. The addition of acetic acid at the time of incubation showed a higher PHA yield, whereas maximum biomass was achieved when acetic acid was added after 48 h. Genetic algorithm (GA) optimized artificial neural network (ANN) was used to model PHA concentration from mixture-process design data. Fitness of the GA-ANN model (R2: 0.935) was superior when compared to the polynomial model (R2: 0.301) from mixture design. Optimization of the ANN model projected 2.691 g l-1 PHA from 7.245 g l-1 acetic acid, 12.756 g l-1 sucrose, and the addition of acetic acid at the time of incubation. Sensitivity analysis indicates the inhibitory effect of all the predictors at higher levels. ANN model can be further used to optimize the variables while extending the bioprocess to fed-batch operation.

Performance of volatile fatty acids production from food waste at the presence of alkyl ethoxy polyglycosides and sodium dodecyl sulfate

In the current context of technological and industrial development, strategies for sustainable development and resource utilization have become increasingly important. FW anaerobic fermentation (Fermentation of Wastes) is a process that utilizes organic waste for biotransformation and is widely used for the production of volatile fatty acids (VFAs). Volatile fatty acids (VFAs) are a kind of high value-added product generated from anaerobic fermentation process, and has extensive applications in chemical synthesis and electricity generation. This study investigated the performance of VFAs production from food waste at the presence of alkyl ethoxy polyglycosides (AEG) and sodium dodecyl sulfate (SDS). The highest yield of VFAs was obtained at 0.1 g AEG/g TS (14.53 g COD/L), which increased by 25.80% than the Blank. But inhibited phenomenon was observed at other reactors with relatively low yield and delayed fermentation time. The inhibition of lactate's production and bioconversion delayed the fermentation time, and SDS has changed the acidogenic fermentation type from lactate-butyrate fermentation to acetate fermentation. In addition, more organic matter dissolved in the fermentation liquor with the addition of AEG and SDS, but the hydrolysis and acidification of polysaccharide were inhibited to some extent. Microbial community analysis showed that the abundance of key bacteria Clostridium has significantly decreased from 82.71% (Blank) to 33.54% (AEG) and 23.72% (SDS), leading to low VFAs production performance.

Biotransformation of starch-based wastewater into bioplastics: Optimization of poly(3-hydroxybutyrate) production by Cupriavidus necator DSM 545 using potato wastewater hydrolysate

Biodegradable biopolymers, such as polyhydroxyalkanoates (PHAs), have emerged as an alternative to petrochemical-based plastics. The present work explores the production of PHAs based on the biotransformation of potato processing wastewater and addresses two different strategies for PHA recovery. To this end, culture conditions for PHA synthesis by Cupriavidus necator DSM 545 were optimized on a laboratory scale using a response surface methodology-based experimental design. Optimal conditions rendered a PHB, poly(3-hydroxybutyrate), accumulation of 83.74 ± 2.37 % (5.1 ± 0.2 gL-1), a 1.4-fold increase compared to the initial conditions. Moreover, polymer extraction with non-halogenated agent improved PHB recovery compared to chloroform method (PHB yield up to 78.78 ± 0.57 %), while maintaining PHB purity. (99.83 ± 4.95 %). Overall, the present work demonstrated the potential valorization of starch-based wastewater by biotransformation into PHBs, a high value-added product, and showed that recovery approaches more eco-friendly than the traditional treatments could be applied to PHB recovery to some extent.

Ammonia impact on the selection of a phototrophic - chemotrophic consortium for polyhydroxyalkanoates production under light-feast / dark-aerated-famine conditions

Phototrophic polyhydroxyalkanoate (PHA) production is an emerging technology for recovering carbon and nutrients from diverse wastewater streams. However, reliable selection methods for the enrichment of PHA accumulating purple phototrophic bacteria (PPB) in phototrophic mixed cultures (PMC) are needed. This research evaluates the impact of ammonia on the selection of a PHA accumulating phototrophic-chemotrophic consortium, towards the enrichment of PHA accumulating PPB. The culture was operated under light-feast/dark-aerated-famine and winter simulated-outdoor conditions (13.2 ± 0.9 °C, transient light, 143.5 W/m2), using real fermented domestic wastewater with molasses as feedstock. Three ammonia supply strategies were assessed: 1) ammonia available only in the light phase, 2) ammonia always present and 3) ammonia available only during the dark-aerated-famine phase. Results showed that the PMC selected under 1) ammonia only in the light and 3) dark-famine ammonia conditions, presented the lowest PHA accumulation capacity during the light period (11.1 % g PHA/g VSS and 10.4 % g PHA/g VSS, respectively). In case 1), the absence of ammonia during the dark-aerated-famine phase did not promote the selection of PHA storing PPB, whereas in case 3) the absence of ammonia during the light period favoured cyanobacteria growth as well as purple sulphur bacteria with increased non-PHA inclusions, resulting in an overall decrease of phototrophic PHA accumulation capacity. The best PHA accumulation performance was obtained with selection under permanent presence of ammonia (case 2), which attained a PHA content of 21.6 % g PHA/g VSS (10.2 Cmmol PHA/L), at a production rate of 0.57 g PHA/L·day, during the light period in the selection reactor. Results in case 2 also showed that feedstock composition impacts the PMC performance, with feedstocks richer in more reduced volatile fatty acids (butyric and valeric acids) decreasing phototrophic performance and leading to acids entering the dark-aerated phase. Nevertheless, the presence of organic carbon in the aerated phase was not detrimental to the system. In fact, it led to the establishment of a phototrophic-chemotrophic consortium that could photosynthetically accumulate a PHA content of 13.2 % g PHA/g VSS (6.7 Cmmol PHA/L) at a production rate of 0.20 g PHA/L·day in the light phase, and was able to further increase that storage up to 18.5 % g PHA/g VSS (11.0 Cmmol PHA/L) at a production rate of 1.35 g PHA/L·day in the dark-aerated period. Furthermore, the light-feast/dark-aerated-famine operation was able to maintain the performance of the selection reactor under winter conditions, unlike non-aerated PMC systems operated under summer conditions, suggesting that night-time aeration coupled with the constant presence of ammonia can contribute to overcoming the seasonal constraints of outdoor operation of PMCs for PHA production.

Toward the Transition of Agricultural Anaerobic Digesters into Multiproduct Biorefineries

Anaerobic digestion allows for the proper management of agro-waste, including manure. Currently, more than 18,000 anaerobic digestion plants are under operation in EU, 80% of which are employed in the rural context. Tariff schemes for power generation from biogas produced during anaerobic digestion of agricultural feedstocks in Germany, Italy and Austria are coming to an end and new approaches are needed to exploit the existing infrastructures. Digesters in the rural context can be implemented and modified to be transformed into sustainable multi-feedstock and multi-purpose biorefineries for the production of energy, nutrients, proteins, bio-chemicals such as carboxylic acids, polyesters and proteins. This paper describes how the transition of agricultural anaerobic digesters into multi-products biorefineries can be achieved and what are the potential benefits originating from the application of a pilot scale platform able to treat cow manure and other crop residues while producing volatile fatty acids, polyhydroxyalkanoates, microbial protein material, hydrogen, methane and a concentrated liquid stream rich in nitrogen, potassium and phosphorus.

Closing the Nutrient Loop-The New Approaches to Recovering Biomass Minerals during the Biorefinery Processes

The recovery of plant mineral nutrients from the bio-based value chains is essential for a sustainable, circular bioeconomy, wherein resources are (re)used sustainably. The widest used approach is to recover plant nutrients on the last stage of biomass utilization processes-e.g., from ash, wastewater, or anaerobic digestate. The best approach is to recover mineral nutrients from the initial stages of biomass biorefinery, especially during biomass pre-treatments. Our paper aims to evaluate the nutrient recovery solutions from a trans-sectorial perspective, including biomass processing and the agricultural use of recovered nutrients. Several solutions integrated with the biomass pre-treatment stage, such as leaching/bioleaching, recovery from pre-treatment neoteric solvents, ionic liquids (ILs), and deep eutectic solvents (DESs) or integrated with hydrothermal treatments are discussed. Reducing mineral contents on silicon, phosphorus, and nitrogen biomass before the core biorefinery processes improves processability and yield and reduces corrosion and fouling effects. The recovered minerals are used as bio-based fertilizers or as silica-based plant biostimulants, with economic and environmental benefits.

Effect of surfactant assisted ultrasonic pretreatment on production of volatile fatty acids from mixed food waste

In this study, the potential effect of surfactant assisted ultrasonic pretreatment on mixed food waste was investigated. Surfactants, such as Rhamnolipid, Sodium dodecyl sulfate; Glucopon and Triton X 100 were evaluated in this work. Among them, the maximum solubilization of chemical oxygen demand of 45.5 % and the highest release of soluble COD of 31 g/L were observed for ultrasonication assisted by Triton X 100 at a dose of 0.01 g/g TS in 30 min. The presence of a surfactant also reduced 27.5 % of energy demand when compared to ultrasonic pretreatment alone. Compared to the non-pretreated samples after anaerobic digestion, ultrasonication assisted by Triton X 100 led to 95 % increase of volatile fatty acid titers and 83 % increase of carbon conversion efficiency. Thus, sonication with the addition of Triton X 100 was proven to be highly effective toward increasing digestibility of and yield of volatile fatty acid from mixed food waste.