DNA deposition on carbon electrodes under controlled dc potentials

Spontaneous Charging from Sliding Water Drops Determines the Interfacial Deposition of Charged Solutes

It has been discovered during the last decade that when water drops slide on hydrophobic surfaces, they spontaneously leave negative charges along the drop path. The drops become positively charged with a potential of 1 kV. This process, called slide electrification, influences drop motion and alters contact angles. Here, a third effect of slide electrification is demonstrated: the preferential deposition of dissolved solutes with positive charges. To illustrate this, water drops containing dissolved charged fluorophore ions are allowed to slide down a tilted hydrophobic surface, and their track is imaged. Two perylene derivatives are applied as fluorophores, one chromophore carrying positive charges, PDI+, and one carrying negative charges, PDI─. PDI+ is deposited at a concentration as low as 0.5 µm. In contrast, PDI─ is only deposited above 5 µm. Experiments using grounded drops or a hydrophobic coating on a conducting substrate indicate that the electric field generated from the negative surface charges behind the drop causes a preferential deposition of the dissolved ions near the interface. This hypothesis also agrees with Kelvin probe measurements. Complex biomolecules deposition e.g. DNA can be also affected by this. These findings contribute to a better understanding of mass transfer processes at interfaces.

Reaction-diffusion wave model for self-assembled network formation of poly(dA)·poly(dT) DNA on mica and HOPG surfaces

Deoxyribonucleic acid (DNA) is a vital molecule for life since it contains genetic information. However, DNA has recently been reported to have unique properties that make it suitable for bionanoelectronic applications, such as the possibility of electrical conductivity and self-organisation. Self-assembled DNA network structures have been observed on several substrates, but the detailed self-assembly mechanism has yet to be determined. The present study investigates self-assembled structures of DNA both theoretically and experimentally. We developed a reaction-diffusion model and used it to investigate pattern formations observed by atomic force microscopy. The computational results qualitatively replicate the network patterns of DNA molecules based on a quantitative agreement with the surface size and timescale. The model can account for the effect of the DNA concentration on pattern formation. Furthermore, peculiar geometric patterns are simulated for mica and highly oriented pyrolytic graphite surfaces.

Voltammetry of the interaction of metronidazole with DNA and its analytical applications

Voltammetric methods were used to probe the interaction of antimicrobial drug metronidazole (MTZ) with calf thymus DNA. Binding constants (K) and binding site sizes (s) were determined from the voltammetric data, i.e., shifts in potential and changes in limiting current with the addition of DNA. MTZ showed appreciable electrostatic binding to DNA in solution with K=2.2(+/- 1.3) x 10(4) M(-1) and s=0.34 bp. One reduction peak of MTZ at the bare glassy carbon electrode (GCE) split into two peaks at the DNA modified GCE (DNA/GCE). These changes in the cyclic voltammogram can only be due to the interaction of MTZ with the surface-confined DNA. In addition, the peak current of MTZ at the DNA/GCE was nearly 8-fold of the response at the bare GCE. The low detection limit of 2.0 x 10(-8) M made the DNA/GCE a promising biosensor for MTZ determination. And this method was successfully applied with high precision and accuracy compared with spectroscopic methods (relative error < 6%) for estimation of the total MTZ drug content in pharmaceutical dosage forms.