Assessment of flourishing levels of individuals by using resting-state fNIRS with different functional connectivity measures

Diagnostic machine learning applications on clinical populations using functional near infrared spectroscopy: a review

Functional near-infrared spectroscopy (fNIRS) and its interaction with machine learning (ML) is a popular research topic for the diagnostic classification of clinical disorders due to the lack of robust and objective biomarkers. This review provides an overview of research on psychiatric diseases by using fNIRS and ML. Article search was carried out and 45 studies were evaluated by considering their sample sizes, used features, ML methodology, and reported accuracy. To our best knowledge, this is the first review that reports diagnostic ML applications using fNIRS. We found that there has been an increasing trend to perform ML applications on fNIRS-based biomarker research since 2010. The most studied populations are schizophrenia (n = 12), attention deficit and hyperactivity disorder (n = 7), and autism spectrum disorder (n = 6) are the most studied populations. There is a significant negative correlation between sample size (>21) and accuracy values. Support vector machine (SVM) and deep learning (DL) approaches were the most popular classifier approaches (SVM = 20) (DL = 10). Eight of these studies recruited a number of participants more than 100 for classification. Concentration changes in oxy-hemoglobin (ΔHbO) based features were used more than concentration changes in deoxy-hemoglobin (ΔHb) based ones and the most popular ΔHbO-based features were mean ΔHbO (n = 11) and ΔHbO-based functional connections (n = 11). Using ML on fNIRS data might be a promising approach to reveal specific biomarkers for diagnostic classification.

Novel Feature Generation for Classification of Motor Activity from Functional Near-Infrared Spectroscopy Signals Using Machine Learning

Recent research in the field of cognitive motor action decoding focuses on data acquired from Functional Near-Infrared Spectroscopy (fNIRS) and its analysis. This research aims to classify two different motor activities, namely, mental drawing (MD) and spatial navigation (SN), using fNIRS data from non-motor baseline data and other motor activities. Accurate activity detection in non-stationary signals like fNIRS is challenging and requires complex feature descriptors. As a novel framework, a new feature generation by fusion of wavelet feature, Hilbert, symlet, and Hjorth parameters is proposed for improving the accuracy of the classification. This new fused feature has statistical descriptor elements, time-localization in the frequency domain, edge feature, texture features, and phase information to detect and locate the activity accurately. Three types of independent component analysis, including FastICA, Picard, and Infomax were implemented for preprocessing which removes noises and motion artifacts. Two independent binary classifiers are designed to handle the complexity of classification in which one is responsible for mental drawing (MD) detection and the other one is spatial navigation (SN). Four different types of algorithms including nearest neighbors (KNN), Linear Discriminant Analysis (LDA), light gradient-boosting machine (LGBM), and Extreme Gradient Boosting (XGBOOST) were implemented. It has been identified that the LGBM classifier gives high accuracies-98% for mental drawing and 97% for spatial navigation. Comparison with existing research proves that the proposed method gives the highest classification accuracies. Statistical validation of the proposed new feature generation by the Kruskal-Wallis H-test and Mann-Whitney U non-parametric test proves the reliability of the proposed mechanism.

Assessing Predictive Ability of Dynamic Time Warping Functional Connectivity for ASD Classification

Functional connectivity MRI (fcMRI) is a technique used to study the functional connectedness of distinct regions of the brain by measuring the temporal correlation between their blood oxygen level-dependent (BOLD) signals. fcMRI is typically measured with the Pearson correlation (PC), which assumes that there is no lag between time series. Dynamic time warping (DTW) is an alternative measure of similarity between time series that is robust to such time lags. We used PC fcMRI data and DTW fcMRI data as predictors in machine learning models for classifying autism spectrum disorder (ASD). When combined with dimension reduction techniques, such as principal component analysis, functional connectivity estimated with DTW showed greater predictive ability than functional connectivity estimated with PC. Our results suggest that DTW fcMRI can be a suitable alternative measure that may be characterizing fcMRI in a different, but complementary, way to PC fcMRI that is worth continued investigation. In studying different variants of cross validation (CV), our results suggest that, when it is necessary to tune model hyperparameters and assess model performance at the same time, a K-fold CV nested within leave-one-out CV may be a competitive contender in terms of performance and computational speed, especially when sample size is not large.

Decoding Articulation Motor Imagery Using Early Connectivity Information in the Motor Cortex: A Functional Near-Infrared Spectroscopy Study

Brain computer interface (BCI) based on speech imagery can help people with motor disorders communicate their thoughts to the outside world in a natural way. Due to being portable, non-invasive, and safe, functional near-infrared spectroscopy (fNIRS) is preferred for developing BCIs. Previous BCIs based on fNIRS mainly relied on activation information, which ignored the functional connectivity between neural areas. In this study, a 4-class speech imagery BCI based on fNIRS is presented to decode simplified articulation motor imagery (only the movements of jaw and lip were retained) of different vowels. Synchronization information in the motor cortex was extracted as features. In multiclass (four classes) settings, the mean subject-dependent classification accuracies approximated or exceeded 40% in the 0-2.5 s and 0-10 s time windows, respectively. In binary class settings (the average classification accuracies of all pairwise comparisons between two vowels), the mean subject-dependent classification accuracies exceeded 70% in the 0-2.5 s and 0-10 s time windows. These results demonstrate that connectivity features can effectively differentiate different vowels even if the time window size was reduced from 10 s to 2.5 s and the decoding performance in both the time windows was almost the same. This finding suggests that speech imagery BCI based on fNIRS can be further optimized in terms of feature extraction and command generation time reduction. In addition, simplified articulation motor imagery of vowels can be distinguished, and therefore, the potential contribution of articulation motor imagery information extracted from the motor cortex should be emphasized in speech imagery BCI based on fNIRS to improve decoding performance.

A systematic review of the neural correlates of well-being reveals no consistent associations

Findings from behavioral and genetic studies indicate a potential role for the involvement of brain structures and brain functioning in well-being. We performed a systematic review on the association between brain structures or brain functioning and well-being, including 56 studies. The 11 electroencephalography (EEG) studies suggest a larger alpha asymmetry (more left than right brain activation) to be related to higher well-being. The 18 Magnetic Resonance Imaging (MRI) studies, 26 resting-state functional MRI studies and two functional near-infrared spectroscopy (fNIRS) studies identified a wide range of brain regions involved in well-being, but replication across studies was scarce, both in direction and strength of the associations. The inconsistency could result from small sample sizes of most studies and a possible wide-spread network of brain regions with small effects involved in well-being. Future directions include well-powered brain-wide association studies and innovative methods to more reliably measure brain activity in daily life.

Decoding lexical tones and vowels in imagined tonal monosyllables using fNIRS signals

Objective.Speech is a common way of communication. Decoding verbal intent could provide a naturalistic communication way for people with severe motor disabilities. Active brain computer interaction (BCI) speller is one of the most commonly used speech BCIs. To reduce the spelling time of Chinese words, identifying vowels and tones that are embedded in imagined Chinese words is essential. Functional near-infrared spectroscopy (fNIRS) has been widely used in BCI because it is portable, non-invasive, safe, low cost, and has a relatively high spatial resolution.Approach.In this study, an active BCI speller based on fNIRS is presented by covertly rehearsing tonal monosyllables with vowels (i.e. /a/, /i/, /o/, and /u/) and four lexical tones in Mandarin Chinese (i.e. tones 1, 2, 3, and 4) for 10 s.Main results.fNIRS results showed significant differences in the right superior temporal gyrus between imagined vowels with tone 2/3/4 and those with tone 1 (i.e. more activations and stronger connections to other brain regions for imagined vowels with tones 2/3/4 than for those with tone 1). Speech-related areas for tone imagery (i.e. the right hemisphere) provided majority of information for identifying tones, while the left hemisphere had advantages in vowel identification. Having decoded both vowels and tones during the post-stimulus 15 s period, the average classification accuracies exceeded 40% and 70% in multiclass (i.e. four classes) and binary settings, respectively. To spell words more quickly, the time window size for decoding was reduced from 15 s to 2.5 s while the classification accuracies were not significantly reduced.Significance.For the first time, this work demonstrated the possibility of discriminating lexical tones and vowels in imagined tonal syllables simultaneously. In addition, the reduced time window for decoding indicated that the spelling time of Chinese words could be significantly reduced in the fNIRS-based BCIs.