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Mayorca-Torres D, León-Salas AJ, Peluffo-Ordoñez DH. Systematic review of computational techniques, dataset utilization, and feature extraction in electrocardiographic imaging. Med Biol Eng Comput 2025; 63:1289-1317. [PMID: 39779645 DOI: 10.1007/s11517-024-03264-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2024] [Accepted: 12/05/2024] [Indexed: 01/11/2025]
Abstract
This study aimed to analyze computational techniques in ECG imaging (ECGI) reconstruction, focusing on dataset identification, problem-solving, and feature extraction. We employed a PRISMA approach to review studies from Scopus and Web of Science, applying Cochrane principles to assess risk of bias. The selection was limited to English peer-reviewed papers published from 2010 to 2023, excluding studies that lacked computational technique descriptions. From 99 reviewed papers, trends show a preference for traditional methods like the boundary element and Tikhonov methods, alongside a rising use of advanced technologies including hybrid techniques and deep learning. These advancements have enhanced cardiac diagnosis and treatment precision. Our findings underscore the need for robust data utilization and innovative computational integration in ECGI, highlighting promising areas for future research and advances. This shift toward tailored cardiac care suggests significant progress in diagnostic and treatment methods.
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Affiliation(s)
- Dagoberto Mayorca-Torres
- Department of Software Systems and Programming Languages, Universidad de Granada, C/Periodista Daniel Saucedo Aranda s/n, Granada, 18071, Spain.
- Faculty of Engineering, Universidad Mariana, Cl 18 34 - 104, Pasto, 52001, Colombia.
| | - Alejandro J León-Salas
- Department of Software Systems and Programming Languages, Universidad de Granada, C/Periodista Daniel Saucedo Aranda s/n, Granada, 18071, Spain
| | - Diego H Peluffo-Ordoñez
- Faculty of Engineering, Corporación Universitaria Autónoma de Nariño, Pasto, 520001, Colombia
- College of Computing, Mohammed VI Polytechnic University, Lot 660, Ben Guerir, 43150, Morocco
- SDAS Research Group, Ben Guerir, 43150, Morocco
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El Ghebouli A, Mombereau A, Haïssaguerre M, Dubois R, Bear LR. ECG electrode localization using 3D visual reconstruction. Front Physiol 2025; 16:1504319. [PMID: 40144548 PMCID: PMC11936951 DOI: 10.3389/fphys.2025.1504319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Accepted: 02/18/2025] [Indexed: 03/28/2025] Open
Abstract
Body surface potential maps (BSPMs) derived from multi-channel ECG recordings enable the detection and diagnosis of electrophysiological phenomena beyond the standard 12-lead ECG. In this work, we developed two AI-based methods for the automatic detection of location of the electrodes used for BSPM: a rapid method using a specialized 3D Depth Sensing (DS) camera and a slower method that can use any 2D camera. Both methods were validated on a phantom model and in 7 healthy volunteers. With the phantom model, both 3D DS camera and 2D camera method achieved an average localization error less than 2 mm when compared to CT-scan or an Electromagnetic Tracking System (ETS). With healthy volunteers, the 3D camera yielded average 3D Euclidean distances ranging from 2.61 ± 1.2 mm to 5.78 ± 3.09 mm depending on the patient, similar to that seen with 2D camera (ranging from 2.45 ± 1.32 mm to 5.88 ± 2.73 mm). These results demonstrate high accuracy and provide practical alternatives to traditional imaging techniques, potentially enhancing the interest of BSPMs in a clinical setting.
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Affiliation(s)
- Ayoub El Ghebouli
- University Bordeaux, Institut national de la sante et de la recherche medicale (INSERM), U-1045, IHU Liryc, Le Centre de Recherche Cardio-Thoracique de Bordeaux (CRCTB), Bordeaux, France
| | - Amaël Mombereau
- University Bordeaux, Institut national de la sante et de la recherche medicale (INSERM), U-1045, IHU Liryc, Le Centre de Recherche Cardio-Thoracique de Bordeaux (CRCTB), Bordeaux, France
| | - Michel Haïssaguerre
- University Bordeaux, Institut national de la sante et de la recherche medicale (INSERM), U-1045, IHU Liryc, Le Centre de Recherche Cardio-Thoracique de Bordeaux (CRCTB), Bordeaux, France
- CHU de Bordeaux, Cardiology-Electrophysiology and Stimulation Department, Institut national de la sante et de la recherche medicale (INSERM), U-1045, Bordeaux, France
| | - Rémi Dubois
- University Bordeaux, Institut national de la sante et de la recherche medicale (INSERM), U-1045, IHU Liryc, Le Centre de Recherche Cardio-Thoracique de Bordeaux (CRCTB), Bordeaux, France
| | - Laura R. Bear
- University Bordeaux, Institut national de la sante et de la recherche medicale (INSERM), U-1045, IHU Liryc, Le Centre de Recherche Cardio-Thoracique de Bordeaux (CRCTB), Bordeaux, France
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Fruelund PZ, Van Dam PM, Melgaard J, Sommer A, Lundbye-Christensen S, Søgaard P, Zaremba T, Graff C, Riahi S. Novel non-invasive ECG imaging method based on the 12-lead ECG for reconstruction of ventricular activation: A proof-of-concept study. Front Cardiovasc Med 2023; 10:1087568. [PMID: 36818351 PMCID: PMC9932809 DOI: 10.3389/fcvm.2023.1087568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Accepted: 01/18/2023] [Indexed: 02/05/2023] Open
Abstract
Aim Current non-invasive electrocardiographic imaging (ECGi) methods are often based on complex body surface potential mapping, limiting the clinical applicability. The aim of this pilot study was to evaluate the ability of a novel non-invasive ECGi method, based on the standard 12-lead ECG, to localize initial site of ventricular activation in right ventricular (RV) paced patients. Validation of the method was performed by comparing the ECGi reconstructed earliest site of activation against the true RV pacing site determined from cardiac computed tomography (CT). Methods This was a retrospective study using data from 34 patients, previously implanted with a dual chamber pacemaker due to advanced atrioventricular block. True RV lead position was determined from analysis of a post-implant cardiac CT scan. The ECGi method was based on an inverse-ECG algorithm applying electrophysiological rules. The algorithm integrated information from an RV paced 12-lead ECG together with a CT-derived patient-specific heart-thorax geometric model to reconstruct a 3D electrical ventricular activation map. Results The mean geodesic localization error (LE) between the ECGi reconstructed initial site of activation and the RV lead insertion site determined from CT was 13.9 ± 5.6 mm. The mean RV endocardial surface area was 146.0 ± 30.0 cm2 and the mean circular LE area was 7.0 ± 5.2 cm2 resulting in a relative LE of 5.0 ± 4.0%. Conclusion We demonstrated a novel non-invasive ECGi method, based on the 12-lead ECG, that accurately localized the RV pacing site in relation to the ventricular anatomy.
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Affiliation(s)
- Patricia Zerlang Fruelund
- Department of Cardiology, Aalborg University Hospital, Aalborg, Denmark,Department of Clinical Medicine, Aalborg University, Aalborg, Denmark,*Correspondence: Patricia Zerlang Fruelund,
| | - Peter M. Van Dam
- Department of Cardiology, University Medical Center Utrecht, Utrecht, Netherlands
| | - Jacob Melgaard
- Department of Health Science and Technology, Faculty of Medicine, Aalborg University, Aalborg, Denmark
| | - Anders Sommer
- Department of Cardiology, Aalborg University Hospital, Aalborg, Denmark
| | | | - Peter Søgaard
- Department of Cardiology, Aalborg University Hospital, Aalborg, Denmark,Department of Clinical Medicine, Aalborg University, Aalborg, Denmark
| | - Tomas Zaremba
- Department of Cardiology, Aalborg University Hospital, Aalborg, Denmark
| | - Claus Graff
- Department of Health Science and Technology, Faculty of Medicine, Aalborg University, Aalborg, Denmark
| | - Sam Riahi
- Department of Cardiology, Aalborg University Hospital, Aalborg, Denmark,Department of Clinical Medicine, Aalborg University, Aalborg, Denmark
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Zenger B, Bergquist JA, Busatto A, Good WW, Rupp LC, Sharma V, MacLeod RS. Tipping the scales of understanding: An engineering approach to design and implement whole-body cardiac electrophysiology experimental models. Front Physiol 2023; 14:1100471. [PMID: 36744034 PMCID: PMC9893785 DOI: 10.3389/fphys.2023.1100471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 01/02/2023] [Indexed: 01/21/2023] Open
Abstract
The study of cardiac electrophysiology is built on experimental models that span all scales, from ion channels to whole-body preparations. Novel discoveries made at each scale have contributed to our fundamental understanding of human cardiac electrophysiology, which informs clinicians as they detect, diagnose, and treat complex cardiac pathologies. This expert review describes an engineering approach to developing experimental models that is applicable across scales. The review also outlines how we applied the approach to create a set of multiscale whole-body experimental models of cardiac electrophysiology, models that are driving new insights into the response of the myocardium to acute ischemia. Specifically, we propose that researchers must address three critical requirements to develop an effective experimental model: 1) how the experimental model replicates and maintains human physiological conditions, 2) how the interventions possible with the experimental model capture human pathophysiology, and 3) what signals need to be measured, at which levels of resolution and fidelity, and what are the resulting requirements of the measurement system and the access to the organs of interest. We will discuss these requirements in the context of two examples of whole-body experimental models, a closed chest in situ model of cardiac ischemia and an isolated-heart, torso-tank preparation, both of which we have developed over decades and used to gather valuable insights from hundreds of experiments.
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Affiliation(s)
- Brian Zenger
- Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT, United States
- Nora Eccles Harrison Cardiovascular Research and Training Institute, The University of Utah, Salt Lake City, UT, United States
- Spencer Eccles School of Medicine, University of Utah, Salt Lake City, UT, United States
| | - Jake A. Bergquist
- Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT, United States
- Nora Eccles Harrison Cardiovascular Research and Training Institute, The University of Utah, Salt Lake City, UT, United States
- Department of Biomedical Engineering, College of Engineering, University of Utah, Salt Lake City, UT, United States
| | - Anna Busatto
- Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT, United States
- Nora Eccles Harrison Cardiovascular Research and Training Institute, The University of Utah, Salt Lake City, UT, United States
- Department of Biomedical Engineering, College of Engineering, University of Utah, Salt Lake City, UT, United States
| | | | - Lindsay C. Rupp
- Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT, United States
- Nora Eccles Harrison Cardiovascular Research and Training Institute, The University of Utah, Salt Lake City, UT, United States
- Department of Biomedical Engineering, College of Engineering, University of Utah, Salt Lake City, UT, United States
| | - Vikas Sharma
- Spencer Eccles School of Medicine, University of Utah, Salt Lake City, UT, United States
| | - Rob S. MacLeod
- Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, UT, United States
- Nora Eccles Harrison Cardiovascular Research and Training Institute, The University of Utah, Salt Lake City, UT, United States
- Department of Biomedical Engineering, College of Engineering, University of Utah, Salt Lake City, UT, United States
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Chen KW, Bear L, Lin CW. Solving Inverse Electrocardiographic Mapping Using Machine Learning and Deep Learning Frameworks. SENSORS (BASEL, SWITZERLAND) 2022; 22:2331. [PMID: 35336502 PMCID: PMC8951148 DOI: 10.3390/s22062331] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Revised: 03/14/2022] [Accepted: 03/16/2022] [Indexed: 06/14/2023]
Abstract
Electrocardiographic imaging (ECGi) reconstructs electrograms at the heart's surface using the potentials recorded at the body's surface. This is called the inverse problem of electrocardiography. This study aimed to improve on the current solution methods using machine learning and deep learning frameworks. Electrocardiograms were simultaneously recorded from pigs' ventricles and their body surfaces. The Fully Connected Neural network (FCN), Long Short-term Memory (LSTM), Convolutional Neural Network (CNN) methods were used for constructing the model. A method is developed to align the data across different pigs. We evaluated the method using leave-one-out cross-validation. For the best result, the overall median of the correlation coefficient of the predicted ECG wave was 0.74. This study demonstrated that a neural network can be used to solve the inverse problem of ECGi with relatively small datasets, with an accuracy compatible with current standard methods.
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Affiliation(s)
- Ke-Wei Chen
- Department of BioMedical Engineering, National Cheng Kung University, Tainan City 70101, Taiwan;
| | - Laura Bear
- Electrophysiology and Heart Modelling Institute (IHU-LIRYC), Fondation Bordeaux Université, 33000 Bordeaux, France;
- Centre de Recherche Cardio-Thoracique de Bordeaux, INSERM U1045, Université de Bordeaux, 33600 Pessac, France
| | - Che-Wei Lin
- Department of BioMedical Engineering, National Cheng Kung University, Tainan City 70101, Taiwan;
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Bear LR, Cluitmans M, Abell E, Rogier J, Labrousse L, Cheng LK, LeGrice I, Lever N, Sands GB, Smaill B, Haïssaguerre M, Bernus O, Coronel R, Dubois R. Electrocardiographic Imaging of Repolarization Abnormalities. J Am Heart Assoc 2021; 10:e020153. [PMID: 33880931 PMCID: PMC8200734 DOI: 10.1161/jaha.120.020153] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Background Dispersion and gradients in repolarization have been associated with life‐threatening arrhythmias, but are difficult to quantify precisely from surface electrocardiography. The objective of this study was to evaluate electrocardiographic imaging (ECGI) to noninvasively detect repolarization‐based abnormalities. Methods and Results Ex vivo data were obtained from Langendorff‐perfused pig hearts (n=8) and a human donor heart. Unipolar electrograms were recorded simultaneously during sinus rhythm from an epicardial sock and the torso‐shaped tank within which the heart was suspended. Regional repolarization heterogeneities were introduced through perfusion of dofetilide and pinacidil into separate perfusion beds. In vivo data included torso and epicardial potentials recorded simultaneously in anesthetized, closed‐chest pigs (n=5), during sinus rhythm, and ventricular pacing. For both data sets, ECGI accurately reconstructed T‐wave electrogram morphologies when compared with those recorded by the sock (ex vivo: correlation coefficient, 0.85 [0.52–0.96], in vivo: correlation coefficient, 0.86 [0.52–0.96]) and repolarization time maps (ex‐vivo: correlation coefficient, 0.73 [0.63–0.83], in vivo: correlation coefficient, 0.76 [0.67–0.82]). ECGI‐reconstructed repolarization time distributions were strongly correlated to those measured by the sock (both data sets, R2 ≥0.92). Although the position of the gradient was slightly shifted by 8.3 (0–13.9) mm, the mean, max, and SD between ECGI and recorded gradient values were highly correlated (R2=0.87, 0.75, and 0.86 respectively). There was no significant difference in ECGI accuracy between ex vivo and in vivo data. Conclusions ECGI reliably and accurately maps potentially critical repolarization abnormalities. This noninvasive approach allows imaging and quantifying individual parameters of abnormal repolarization‐based substrates in patients with arrhythmogenesis, to improve diagnosis and risk stratification.
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Affiliation(s)
- Laura R Bear
- IHU-LIRYCFondation Bordeaux Université Pessac France.,CRCTB U1045 Université de Bordeaux Bordeaux France.,Inserm U1045 CRCTB Pessac France
| | - Matthijs Cluitmans
- CARIM School for Cardiovascular Diseases Maastricht UMC Maastricht Netherlands
| | - Emma Abell
- IHU-LIRYCFondation Bordeaux Université Pessac France.,CRCTB U1045 Université de Bordeaux Bordeaux France.,Inserm U1045 CRCTB Pessac France
| | | | - Louis Labrousse
- IHU-LIRYCFondation Bordeaux Université Pessac France.,Department of Cardiac Surgery CHU Pessac France
| | - Leo K Cheng
- Auckland Bioengineering Institute University of Auckland Auckland New Zealand
| | - Ian LeGrice
- Auckland Bioengineering Institute University of Auckland Auckland New Zealand
| | - Nigel Lever
- Auckland Bioengineering Institute University of Auckland Auckland New Zealand
| | - Gregory B Sands
- Auckland Bioengineering Institute University of Auckland Auckland New Zealand
| | - Bruce Smaill
- Auckland Bioengineering Institute University of Auckland Auckland New Zealand
| | - Michel Haïssaguerre
- IHU-LIRYCFondation Bordeaux Université Pessac France.,CRCTB U1045 Université de Bordeaux Bordeaux France.,Inserm U1045 CRCTB Pessac France.,Department of Cardiac Electrophysiology and Stimulation Bordeaux University Hospital (CHU) Pessac France
| | - Olivier Bernus
- IHU-LIRYCFondation Bordeaux Université Pessac France.,CRCTB U1045 Université de Bordeaux Bordeaux France.,Inserm U1045 CRCTB Pessac France
| | - Ruben Coronel
- IHU-LIRYCFondation Bordeaux Université Pessac France.,Department of Experimental Cardiology Academic Medical Center Amsterdam the Netherlands
| | - Rémi Dubois
- IHU-LIRYCFondation Bordeaux Université Pessac France.,CRCTB U1045 Université de Bordeaux Bordeaux France.,Inserm U1045 CRCTB Pessac France
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Zenger B, Good WW, Bergquist JA, Burton BM, Tate JD, Berkenbile L, Sharma V, MacLeod RS. Novel experimental model for studying the spatiotemporal electrical signature of acute myocardial ischemia: a translational platform. Physiol Meas 2020; 41:015002. [PMID: 31860892 DOI: 10.1088/1361-6579/ab64b9] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Myocardial ischemia is one of the most common cardiovascular pathologies and can indicate many severe and life threatening diseases. Despite these risks, current electrocardiographic detection techniques for ischemia are mediocre at best, with reported sensitivity and specificity ranging from 50%-70% and 70%-90%, respectively. OBJECTIVE To improve this performance, we set out to develop an experimental preparation to induce, detect, and analyze bioelectric sources of myocardial ischemia and determine how these sources reflect changes in body-surface potential measurements. APPROACH We designed the experimental preparation with three important characteristics: (1) enable comprehensive and simultaneous high-resolution electrical recordings within the myocardial wall, on the heart surface, and on the torso surface; (2) develop techniques to visualize these recorded electrical signals in time and space; and (3) accurately and controllably simulate ischemic stress within the heart by modulating the supply of blood, the demand for perfusion, or a combination of both. MAIN RESULTS To achieve these goals we designed comprehensive system that includes (1) custom electrode arrays (2) signal acquisition and multiplexing units, (3) a surgical technique to place electrical recording and myocardial ischemic control equipment, and (4) an image based modeling pipeline to acquire, process, and visualize the results. With this setup, we are uniquely able to capture simultaneously and continuously the electrical signatures of acute myocardial ischemia within the heart, on the heart surface, and on the body surface. SIGNIFICANCE This novel experimental preparation enables investigation of the complex and dynamic nature of acute myocardial ischemia that should lead to new, clinically translatable results.
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Affiliation(s)
- Brian Zenger
- Scientific Computing and Imaging Institute, SLC, UT, United States of America. Nora Eccles Cardiovascular Research and Training Institute, SLC, UT, United States of America. School of Medicine, University of Utah, SLC, UT, United States of America. Department of Biomedical Engineering, University of Utah, SLC, UT, United States of America. Author to whom any correspondence should be addressed
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Kallhovd S, Maleckar MM, Rognes ME. Inverse estimation of cardiac activation times via gradient-based optimization. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2018; 34:e2919. [PMID: 28744962 DOI: 10.1002/cnm.2919] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2016] [Revised: 06/01/2017] [Accepted: 07/20/2017] [Indexed: 06/07/2023]
Abstract
Computational modeling may provide a quantitative framework for integrating multiscale data to gain insight into mechanisms of heart disease, identify and test pharmacological and electrical therapy and interventions, and support clinical decisions. Patient-specific computational cardiac models can help guide such procedures, and cardiac inverse modeling is a promising alternative to adequately personalize these models. Indeed, full cardiac inverse modeling is currently becoming computationally feasible; however, fundamental work to assess the feasibility of emerging techniques is still needed. In this study, we use a partial differential equation-constrained optimal control approach to numerically investigate the identifiability of an initial activation sequence from synthetic (partial) observations of the extracellular potential using the bidomain approximation and 2D representations of cardiac tissue. Our results demonstrate that activation times and duration of several stimuli can be recovered even with high levels of noise, that it is sufficient to sample the observations at the electrocardiogram-relevant sampling frequency of 1 kHz, and that spatial resolutions that are coarser than the standard in electrophysiological simulations can be used. The optimization of activation times is still effective when synthetic data are generated with a different cell membrane kinetics model than optimized for. The findings thus indicate that the presented approach has potential for finding activation sequences from clinical data modalities, as an extension to existing cardiac imaging approaches.
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Affiliation(s)
- Siri Kallhovd
- Simula Research Laboratory, PO Box 134,, 1325 Lysaker, Norway
- Department of Informatics, University of Oslo, PO Box 1080,, Blindern 0316 Oslo, Norway
- Center for Cardiological Innovation, Sognsvannsveien 9, 0372 Oslo, Norway
| | - Mary M Maleckar
- Simula Research Laboratory, PO Box 134,, 1325 Lysaker, Norway
- Center for Cardiological Innovation, Sognsvannsveien 9, 0372 Oslo, Norway
- Allen Institute for Cell Science, 615 Westlake Ave,, Seattle, WA 98109, USA
| | - Marie E Rognes
- Simula Research Laboratory, PO Box 134,, 1325 Lysaker, Norway
- Department of Mathematics, University of Oslo, PO Box 1053, Blindern 0316 Oslo, Norway
- Center for Biomedical Computing, PO Box 134,, 1325 Lysaker, Norway
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Farahani B, Skandari R, Abbasi MA, Aghalou S, Gohari S, Heydari AH, Farahani M. The Association between Myocardial Perfusion Scan and Electrocardiographic Findings among Patients with Myocardial Ischemia. INTERNATIONAL JOURNAL OF CARDIOVASCULAR PRACTICE 2017. [DOI: 10.21859/ijcp-020108] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
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Aras K, Good W, Tate J, Burton B, Brooks D, Coll-Font J, Doessel O, Schulze W, Potyagaylo D, Wang L, van Dam P, MacLeod R. Experimental Data and Geometric Analysis Repository-EDGAR. J Electrocardiol 2015; 48:975-81. [PMID: 26320369 DOI: 10.1016/j.jelectrocard.2015.08.008] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2015] [Indexed: 10/23/2022]
Abstract
INTRODUCTION The "Experimental Data and Geometric Analysis Repository", or EDGAR is an Internet-based archive of curated data that are freely distributed to the international research community for the application and validation of electrocardiographic imaging (ECGI) techniques. The EDGAR project is a collaborative effort by the Consortium for ECG Imaging (CEI, ecg-imaging.org), and focused on two specific aims. One aim is to host an online repository that provides access to a wide spectrum of data, and the second aim is to provide a standard information format for the exchange of these diverse datasets. METHODS The EDGAR system is composed of two interrelated components: 1) a metadata model, which includes a set of descriptive parameters and information, time signals from both the cardiac source and body-surface, and extensive geometric information, including images, geometric models, and measure locations used during the data acquisition/generation; and 2) a web interface. This web interface provides efficient, search, browsing, and retrieval of data from the repository. RESULTS An aggregation of experimental, clinical and simulation data from various centers is being made available through the EDGAR project including experimental data from animal studies provided by the University of Utah (USA), clinical data from multiple human subjects provided by the Charles University Hospital (Czech Republic), and computer simulation data provided by the Karlsruhe Institute of Technology (Germany). CONCLUSIONS It is our hope that EDGAR will serve as a communal forum for sharing and distribution of cardiac electrophysiology data and geometric models for use in ECGI research.
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Affiliation(s)
- Kedar Aras
- Bioengineering Department, Scientific Computing and Imaging Institute (SCI), Cardiovascular Research and Training Institute (CVRTI), University of Utah, Salt Lake City, UT, USA.
| | - Wilson Good
- Bioengineering Department, Scientific Computing and Imaging Institute (SCI), Cardiovascular Research and Training Institute (CVRTI), University of Utah, Salt Lake City, UT, USA
| | - Jess Tate
- Bioengineering Department, Scientific Computing and Imaging Institute (SCI), Cardiovascular Research and Training Institute (CVRTI), University of Utah, Salt Lake City, UT, USA
| | - Brett Burton
- Bioengineering Department, Scientific Computing and Imaging Institute (SCI), Cardiovascular Research and Training Institute (CVRTI), University of Utah, Salt Lake City, UT, USA
| | - Dana Brooks
- Department of Electrical and Computer Engineering, Northeastern University, Boston, MA, USA
| | - Jaume Coll-Font
- Department of Electrical and Computer Engineering, Northeastern University, Boston, MA, USA
| | - Olaf Doessel
- Institute of Biomedical Engineering, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Walther Schulze
- Institute of Biomedical Engineering, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Danila Potyagaylo
- Institute of Biomedical Engineering, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Linwei Wang
- Program of Computing and Information Sciences, Rochester Institute of Technology, Rochester, NY, USA
| | - Peter van Dam
- Radboud University, Nijmegen, The Netherlands; David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
| | - Rob MacLeod
- Bioengineering Department, Scientific Computing and Imaging Institute (SCI), Cardiovascular Research and Training Institute (CVRTI), University of Utah, Salt Lake City, UT, USA
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