Structural characterization, recognition patterns and theoretical calculations of long-chain N-alkyl substituted purine and pyrimidine bases as ligands: On the importance of anion–π interactions

Electrostatic co-assembly of pillar[n]pyridiniums and calix[4]arene in aqueous media

The cationic pillar[n]pyridiniums and anionic p-sulfonatocalix[4]arene co-assemble into all-organic supersalts through encaging of the supercation units within/between the capsules emerged from superanion pairs. The encapsulation occures both in the solid...

Crystal structures of N6-modified-amino acid nucleobase analogs(iii): adenine–valeric acid, adenine–hexanoic acid and adenine–gabapentine

H-bonding networks, anion–π and π–π interactions in the crystal structures of N⁶-modified-amino acid adenine analogs are investigated by means of DFT calculations and X-ray crystallography analysis.

Metal removal from the secondary building unit of bio-MOF-1 by adenine N6-alkylation while retaining the overall 3D porous topology

A novel approach to modify the SBU of bio-MOF-1 by reducing the nuclearity of the metal cluster while retaining the topology of the anionic 3D framework is reported.

A cyanide-sensing detector in aqueous solution based on anion-π interaction-driven electron transfer

A "turn on" fluorescent and colorimetric sensor, HAT(CN)6, was developed for the light-up detection of cyanide. It was implemented through its strong anion-π interaction, inducing thermal CN- → HAT(CN)6 electron transfer, to give the dianion product [HAT(CN)6]2-, which exhibits unexpected fluorescence. The sensor shows high selectivity, rapid response and a low detection limit towards CN- in aqueous solution, hence indicating its enormous potential in practical applications.

Crystal structures of N6-modified-aminoacid/peptide nucleobase analogs: hybrid adenine–glycine and adenine–glycylglycine molecules

Anion–π interactions in crystal structures of N⁶-modified-aminoacid and dipeptide adenine analogs are investigated using X-ray crystallography and DFT calculations.

The first X-ray structure of a silver–nucleotide complex: interaction of ion Ag(i) with cytidine-5′-monophosphate

The synthesis and X-ray characterization of an unprecedented complex of Ag(i) with cytidine-5′-monophosphate (HCMP) is reported. The coordination of Ag(i) to HCMP is via both the N3 and O2 atoms of two cytosine moieties and the phosphate group, generating a MOF.

Structural and energetic study of cation–π–cation interactions in proteins

Statistical and energetic analysis of cation–π–cation motifs in protein structures suggests a potential stabilizing role in the protein fold.

π-Hole aerogen bonding interactions

In this manuscript we combine high level ab initio calculations (RI-MP2/aug-cc-pVTZ) and the analysis of several crystal structures to demonstrate the existence of π-hole aerogen bonding interactions in Xe(iv) compounds. The ability of XeF4 and Xe(OMe)4 to interact with electron rich molecules is rationalized using several computational tools, including molecular electrostatic potential surfaces, energetic and geometric features of the complexes and "atoms in molecules" (AIM) and Natural Bond Orbital (NBO) analyses. We have found support for the π-hole interaction involving the xenon atom from the solid state architecture of several X-ray structures retrieved from the crystal structural depot. Particularly, π-hole aerogen bonding interactions are quite common in the solid state of Xe(IV) compounds.

Host-Guest Chemistry: Oxoanion Recognition Based on Combined Charge-Assisted C-H or Halogen-Bonding Interactions and Anion⋅⋅⋅Anion Interactions Mediated by Hydrogen Bonds

Several bis-triazolium-based receptors have been synthesized and their anion-recognition capabilities have been studied. The central chiral 1,1'-bi-2-naphthol (BINOL) core features either two aryl or ferrocenyl end-capped side arms with central halogen- or hydrogen-bonding triazolium receptors. NMR spectroscopic data indicate the simultaneous occurrence of several charge-assisted aliphatic and heteroaromatic C-H noncovalent interactions and combinations of C-H hydrogen and halogen bonding. The receptors are able to selectively interact with HP2 O7 (3-) , H2 PO4 (-) , and SO4 (2-) anions, and the value of the association constant follows the sequence: HP2 O7 (3-) >SO4 (2-) >H2 PO4 (-) . The ferrocenyl end-capped 7(2+) ⋅2 BF4 (-) receptor allows recognition and differentiation of H2 PO4 (-) and HP2 O7 (3-) anions by using different channels: H2 PO4 (-) is selectively detected through absorption and emission methods and HP2 O7 (3-) by using electrochemical techniques. Significant structural results are the observation of an anion⋅⋅⋅anion interaction in the solid state (2:2 complex, 6(2+) ⋅[H2 P2 O7 ](2-) ), and a short C-I⋅⋅⋅O contact is observed in the structure of the complex [8(2+) ][SO4 ]0.5 [BF4 ].

Towards design strategies for anion–π interactions in crystal engineering

This highlight article summarizes some of the fundamental aspects of the anion–π interaction leading to several design strategies for generating it in solids. In the main body we highlight some relevant examples that illustrate the viability of these strategies and the importance of anion–π interactions in crystal engineering.

Experimental investigation of anion–π interactions – applications and biochemical relevance

Anion–π interactions, intuitively repulsive forces, turned from controversial to a well-established non-covalent interaction over the past quarter of a century.

Silver mediated duplex-type complexes of pyrimidinophanes and their acyclic counterparts

Pyrimidinophanes revealed high extraction selectivity for Ag⁺ ions and afforded Ag⁺ mediated duplex-type complexes. Such coordination is realized due to the N1-atoms of the 2-thiocytosine fragments and the polymethylene spacer linking amine groups.

Cadmium(ii) complexes containing N,N′-dimethylviolurate as ligand or counteranion: synthesis, characterization, crystal structures and DFT study

The synthesis and X-ray characterization of two N,N′-dimethylvioluric acid (1) derivatives of formula [Cd(DMV)₂(benzim)₂] (2) (benzim = benzimidazole) and [Cd(H₂O)₄(py)₂](DMV)₂ (3) (py = pyridine) are reported.

Multi-center covalency: revisiting the nature of anion–π interactions

Plot of the delocalization index, δ(X⁻,Ω), scaled by the internuclear distance, R_X,Ω, versus the exchange–correlation potential energy, V_XC(X⁻,Ω), for anion–π complexes.

Synthesis, X-ray characterization and DFT studies of bis-N-imidazolylpyrimidine salts: the prominent role of hydrogen bonding and anion–π interactions

Five new compounds have been synthesized and characterized by elemental analysis, IR, NMR and single-crystal X-ray diffraction. They present interesting assemblies in the solid state dominated by H-bonding and anion–π interactions.

Theoretical design of molecular grippers for anion recognition based on subporphyrazines and subphthalocyanines

Subphthalocyanines are used as frameworks to build chromogenic grippers for anion capture, even in solvents like water.