1
|
Espitia Cogollo E, Echeverría GA, Piro OE, Jios JL, Ulic SE. Perhalomethyl Chromones: Spectroscopic, X‐Ray Diffraction, Hirshfeld Surface, and Density Functional Theory Studies of the Noncovalent Interactions. CRYSTAL RESEARCH AND TECHNOLOGY 2022. [DOI: 10.1002/crat.202200085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Edeimis Espitia Cogollo
- CEQUINOR (CONICET‐UNLP) Facultad de Ciencias Exactas Universidad Nacional de La Plata Bv. 120 N° 1465 La Plata 1900 Argentina
| | - Gustavo A. Echeverría
- Departamento de Física Facultad de Ciencias Exactas Universidad Nacional de La Plata e IFLP (CONICET, CCT‐La Plata) C. C. 67 La Plata 1900 Argentina
| | - Oscar E. Piro
- Departamento de Física Facultad de Ciencias Exactas Universidad Nacional de La Plata e IFLP (CONICET, CCT‐La Plata) C. C. 67 La Plata 1900 Argentina
| | - Jorge L. Jios
- Laboratorio UPL (UNLP‐CIC) Campus Tecnológico Gonnet (CIC‐BA) Cno. Centenario e/505 y 508 Gonnet (1897) Argentina
- Departamento de Química Facultad de Ciencias Exactas Universidad Nacional de La Plata 47 esq. 115 La Plata (1900) Argentina
| | - Sonia E. Ulic
- CEQUINOR (CONICET‐UNLP) Facultad de Ciencias Exactas Universidad Nacional de La Plata Bv. 120 N° 1465 La Plata 1900 Argentina
- Departamento de Ciencias Básicas Universidad Nacional de Luján Rutas 5 y 7 Luján Buenos Aires 6700 Argentina
| |
Collapse
|
2
|
Narváez-Ordoñez EG, Pabón-Carcelén KA, Zurita-Saltos DA, Bonilla-Valladares PM, Yánez-Darquea TG, Ramos-Guerrero LA, Ulic SE, Jios JL, Echeverría GA, Piro OE, Langer P, Alcívar-León CD, Heredia-Moya J. Synthesis, Experimental and Theoretical Study of Azidochromones. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27092636. [PMID: 35565987 PMCID: PMC9105743 DOI: 10.3390/molecules27092636] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 02/10/2022] [Accepted: 02/16/2022] [Indexed: 11/16/2022]
Abstract
A series of 2-(haloalkyl)-3-azidomethyl and 6-azido chromones has been synthetized, characterized and studied by theoretical (DFT calculations) and spectroscopic methods (UV-Vis, NMR). The crystal structure of 3-azidomethyl-2-difluoromethyl chromone, determined by X-ray diffraction methods, shows a planar framework due to extended π-bond delocalization. Its molecular packing is stabilized by F···H, N···H and O···H hydrogen bonds, π···π stacking and C–O···π intermolecular interactions. Moreover, AIM, NCI and Hirshfeld analysis evidenced that azido moiety has a significant role in the stabilization of crystal packing through weak intermolecular interactions, where analysis of electronic density suggested closed-shell (CS) interatomic interactions.
Collapse
Affiliation(s)
- Ena G. Narváez-Ordoñez
- Facultad de Ciencias Químicas, Universidad Central del Ecuador, Francisco Viteri s/n y Gilberto Gato Sobral, Quito 170521, Ecuador; (E.G.N.-O.); (K.A.P.-C.); (D.A.Z.-S.); (P.M.B.-V.); (T.G.Y.-D.)
| | - Kevin A. Pabón-Carcelén
- Facultad de Ciencias Químicas, Universidad Central del Ecuador, Francisco Viteri s/n y Gilberto Gato Sobral, Quito 170521, Ecuador; (E.G.N.-O.); (K.A.P.-C.); (D.A.Z.-S.); (P.M.B.-V.); (T.G.Y.-D.)
| | - Daniel A. Zurita-Saltos
- Facultad de Ciencias Químicas, Universidad Central del Ecuador, Francisco Viteri s/n y Gilberto Gato Sobral, Quito 170521, Ecuador; (E.G.N.-O.); (K.A.P.-C.); (D.A.Z.-S.); (P.M.B.-V.); (T.G.Y.-D.)
| | - Pablo M. Bonilla-Valladares
- Facultad de Ciencias Químicas, Universidad Central del Ecuador, Francisco Viteri s/n y Gilberto Gato Sobral, Quito 170521, Ecuador; (E.G.N.-O.); (K.A.P.-C.); (D.A.Z.-S.); (P.M.B.-V.); (T.G.Y.-D.)
| | - Trosky G. Yánez-Darquea
- Facultad de Ciencias Químicas, Universidad Central del Ecuador, Francisco Viteri s/n y Gilberto Gato Sobral, Quito 170521, Ecuador; (E.G.N.-O.); (K.A.P.-C.); (D.A.Z.-S.); (P.M.B.-V.); (T.G.Y.-D.)
| | | | - Sonia E. Ulic
- CEQUINOR (CONICET-UNLP), Facultad de Ciencias Exactas, Universidad Nacional de La Plata, Bv. 120 No 1465, La Plata 1900, Buenos Aires, Argentina;
- Departamento de Ciencias Básicas, Facultad de Ciencias Exactas, Universidad Nacional de Luján, Rutas 5 y 7, Luján 6700, Buenos Aires, Argentina
| | - Jorge L. Jios
- Laboratorio UPL (UNLP-CIC), Camino Centenario e/505 y 508 (1897) M.B. Gonnet and Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, República Argentina. 47 esq. 115, La Plata 1900, Buenos Aires, Argentina;
| | - Gustavo A. Echeverría
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata e IFLP (CONICET, CCT-La Plata), La Plata 1900, Buenos Aires, Argentina; (G.A.E.); (O.E.P.)
| | - Oscar E. Piro
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata e IFLP (CONICET, CCT-La Plata), La Plata 1900, Buenos Aires, Argentina; (G.A.E.); (O.E.P.)
| | - Peter Langer
- Institut für Chemie, Universität Rostock, Albert-Einstein-Str. 3a, 18059 Rostock, Germany;
- Leibniz Institut für Katalyse, Universität Rostock e. V. (LIKAT), Albert-Einstein-Str. 29a, 18059 Rostock, Germany
| | - Christian D. Alcívar-León
- Facultad de Ciencias Químicas, Universidad Central del Ecuador, Francisco Viteri s/n y Gilberto Gato Sobral, Quito 170521, Ecuador; (E.G.N.-O.); (K.A.P.-C.); (D.A.Z.-S.); (P.M.B.-V.); (T.G.Y.-D.)
- Correspondence: (C.D.A.-L.); (J.H.-M.)
| | - Jorge Heredia-Moya
- Centro de Investigación Biomédica (CENBIO), Facultad de Ciencias de la Salud Eugenio Espejo, Universidad UTE, Quito 170527, Ecuador
- Correspondence: (C.D.A.-L.); (J.H.-M.)
| |
Collapse
|
3
|
Narváez O EG, Bonilla V. PM, Zurita DA, Alcívar L. CD, Heredia-Moya J, Ulic SE, Jios JL, Piro OE, Echeverría GA, Langer P. Synthesis, experimental and theoretical study of novel 2-haloalkyl (-CF2H, -CCl2H, -CF2CF3)-, 3-bromo and bromomethyl substituted chromones. J Fluor Chem 2021. [DOI: 10.1016/j.jfluchem.2020.109717] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
|
4
|
Synthesis and structural study of 2-(haloalkyl)-3-methylchromones. MONATSHEFTE FUR CHEMIE 2019. [DOI: 10.1007/s00706-019-02512-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
5
|
Lu J, Scheiner S. Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra. Molecules 2019; 24:E2822. [PMID: 31382402 PMCID: PMC6696224 DOI: 10.3390/molecules24152822] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2019] [Revised: 07/25/2019] [Accepted: 07/31/2019] [Indexed: 11/22/2022] Open
Abstract
Complexes were formed pairing FX, FHY, FH2Z, and FH3T (X = Cl, Br, I; Y = S, Se, Te; Z = P, As, Sb; T = Si, Ge, Sn) with NH3 in order to form an A⋯N noncovalent bond, where A refers to the central atom. Geometries, energetics, atomic charges, and spectroscopic characteristics of these complexes were evaluated via DFT calculations. In all cases, the A-F bond, which is located opposite the base and is responsible for the σ-hole on the A atom, elongates and its stretching frequency undergoes a shift to the red. This shift varies from 42 to 175 cm-1 and is largest for the halogen bonds, followed by chalcogen, tetrel, and then pnicogen. The shift also decreases as the central A atom is enlarged. The NMR chemical shielding of the A atom is increased while that of the F and electron donor N atom are lowered. Unlike the IR frequency shifts, it is the third-row A atoms that undergo the largest change in NMR shielding. The change in shielding of A is highly variable, ranging from negligible for FSnH3 all the way up to 1675 ppm for FBr, while those of the F atom lie in the 55-422 ppm range. Although smaller in magnitude, the changes in the N shielding are still easily detectable, between 7 and 27 ppm.
Collapse
Affiliation(s)
- Jia Lu
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT 84322-0300, USA
| | - Steve Scheiner
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT 84322-0300, USA.
| |
Collapse
|
6
|
Grineva OV. How do halogen atoms influence the competition between all-trans and hairpin conformers of unbranched alkanes? Struct Chem 2019. [DOI: 10.1007/s11224-019-1281-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
7
|
Alcívar León CD, Echeverría GA, Piro OE, Ulic SE, Jios JL, Luna Tapia CA, Mera Guzmán MF. New thiourea and urea derivatives containing trifluoromethyl- and bis-triflouromethyl-4H-chromen-3-yl substituents. Mol Phys 2019. [DOI: 10.1080/00268976.2018.1514132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- C. D. Alcívar León
- Centro de Investigación de Alimentos, CIAL, Facultad de Ciencias de la Ingeniería e Industrias, Universidad Tecnológica Equinoccial, Quito, Ecuador
| | - G. A. Echeverría
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata e IFLP (CONICET, CCT-La Plata), La Plata, Argentina
| | - O. E. Piro
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata e IFLP (CONICET, CCT-La Plata), La Plata, Argentina
| | - S. E. Ulic
- CEQUINOR (CONICET-UNLP), Facultad de Ciencias Exactas, Universidad Nacional de La Plata, La Plata, República Argentina
- Departamento de Ciencias Básicas, Universidad Nacional de Luján, Buenos Aires, República Argentina
| | - J. L. Jios
- UNIDAD PLAPIMU-LASEISIC (UNLP-CIC), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, La Plata, Argentina
| | - C. A. Luna Tapia
- Centro de Investigación de Alimentos, CIAL, Facultad de Ciencias de la Ingeniería e Industrias, Universidad Tecnológica Equinoccial, Quito, Ecuador
| | - M. F. Mera Guzmán
- Centro de Investigación de Alimentos, CIAL, Facultad de Ciencias de la Ingeniería e Industrias, Universidad Tecnológica Equinoccial, Quito, Ecuador
| |
Collapse
|
8
|
A new perfluoromethyl aminoenone derivative and the role of the hydrogen bonding in the intra- and intermolecular interactions. J Fluor Chem 2018. [DOI: 10.1016/j.jfluchem.2018.01.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
|
9
|
Delgado Espinosa ZY, Saeed A, Mahmood S, Echeverría GA, Piro OE, Erben MF. The effect of chalcogen substitution on the structure and spectroscopy of 4,7-dimethyl-2H-chromen-2-one/thione analogues. NEW J CHEM 2017. [DOI: 10.1039/c7nj01311f] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The structural and spectroscopic properties of the 1-benzopyran-2-one/thione moiety.
Collapse
Affiliation(s)
- Zuly Yuliana Delgado Espinosa
- CEQUINOR (UNLP, CONICET-CCT La Plata)
- Departamento de Química
- Facultad de Ciencias Exactas
- Universidad Nacional de La Plata
- La Plata (1900)
| | - Aamer Saeed
- Department of Chemistry
- Quaid-I-Azam University
- Islamabad 45320
- Pakistan
| | - Shamsul Mahmood
- Department of Chemistry
- Quaid-I-Azam University
- Islamabad 45320
- Pakistan
| | - Gustavo A. Echeverría
- IFLP (CONICET, CCT-La Plata) Instituto de Física La Plata
- Departamento de Física
- Facultad de Ciencias Exactas
- Universidad Nacional de La Plata
- La Plata (1900)
| | - Oscar E. Piro
- IFLP (CONICET, CCT-La Plata) Instituto de Física La Plata
- Departamento de Física
- Facultad de Ciencias Exactas
- Universidad Nacional de La Plata
- La Plata (1900)
| | - Mauricio F. Erben
- CEQUINOR (UNLP, CONICET-CCT La Plata)
- Departamento de Química
- Facultad de Ciencias Exactas
- Universidad Nacional de La Plata
- La Plata (1900)
| |
Collapse
|
10
|
Alcívar León CD, Echeverría GA, Piro OE, Ulic SE, Jios JL, Pereañez JA, Henao Castañeda IC, Pérez H. The role of non-covalent interactions in some 2-trifluoromethylchromones in the solid state. NEW J CHEM 2017. [DOI: 10.1039/c7nj00481h] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Intermolecular interactions in chromone systems and criteria for the existence of C–H⋯F hydrogen bonds involving organic fluorine have been focused on in this work.
Collapse
Affiliation(s)
- Christian David Alcívar León
- Centro de Investigación de Alimentos
- CIAL
- Facultad de Ciencias de la Ingeniería e Industrias
- Universidad Tecnológica Equinoccial
- EC171029 Quito
| | - Gustavo Alberto Echeverría
- Departamento de Física
- Facultad de Ciencias Exactas
- Universidad Nacional de La Plata e IFLP (CONICET, CCT-La Plata)
- (1900) La Plata
- Republica Argentina
| | - Oscar Enrique Piro
- Departamento de Física
- Facultad de Ciencias Exactas
- Universidad Nacional de La Plata e IFLP (CONICET, CCT-La Plata)
- (1900) La Plata
- Republica Argentina
| | - Sonia Elizabeth Ulic
- CEQUINOR (CONICET-UNLP)
- Facultad de Ciencias Exactas
- Universidad Nacional de La Plata
- La Plata
- Republica Argentina
| | - Jorge Luis Jios
- UNIDAD PLAPIMU-LASEISIC (UNLP-CIC)
- Departamento de Química
- Facultad de Ciencias Exactas
- Universidad Nacional de La Plata
- (1897) Gonnet
| | - Jaime Andrés Pereañez
- Programa de Ofidismo/Escorpionimo
- Facultad de Ciencias Farmacéuticas y Alimentarias
- Universidad de Antioquia UdeA
- Medellín
- Colombia
| | - Isabel Cristina Henao Castañeda
- Grupo de Productos Naturales Marinos
- Facultad de Ciencias Farmacéuticas y Alimentarias
- Universidad de Antioquia UdeA
- Medellín
- Colombia
| | - Hiram Pérez
- Departamento de Química Inorgánica
- Facultad de Química
- Universidad de La Habana
- La Habana 10400
- Cuba
| |
Collapse
|
11
|
Haruna K, Alenaizan AA, Al-Saadi AA. Density functional theory study of the substituent effect on the structure, conformation and vibrational spectra in halosubstituted anilines. RSC Adv 2016. [DOI: 10.1039/c6ra11908e] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Abstract
A comparative density functional theory (DFT) study exploring the structural and spectroscopic properties of the complete set of halosubstituted anilines with the halogens being F, Cl and Br was carried out.
Collapse
Affiliation(s)
- Kabiru Haruna
- Chemistry Department
- King Fahd University of Petroleum and Minerals
- Dhahran 31261
- Saudi Arabia
| | - Asem A. Alenaizan
- Chemistry Department
- King Fahd University of Petroleum and Minerals
- Dhahran 31261
- Saudi Arabia
| | - Abdulaziz A. Al-Saadi
- Chemistry Department
- King Fahd University of Petroleum and Minerals
- Dhahran 31261
- Saudi Arabia
| |
Collapse
|