Resolving the excited state relaxation dynamics of guanosine monomers and hydrogen-bonded homodimers in chloroform solution

Transient absorption spectroscopy of the electron transfer step in the photochemically activated polymerizations of N-ethylcarbazole and 9-phenylcarbazole

The polymerization of photoexcited N-ethylcarbazole (N-EC) in the presence of an electron acceptor begins with an electron transfer (ET) step to generate a radical cation of N-EC (N-EC˙+). Here, the production of N-EC˙+ is studied on picosecond to nanosecond timescales after N-EC photoexcitation at a wavelength λex = 345 nm using transient electronic and vibrational absorption spectroscopy. The kinetics and mechanisms of ET to diphenyliodonium hexafluorophosphate (Ph2I+PF6-) or para-alkylated variants are examined in dichloromethane (DCM) and acetonitrile (ACN) solutions. The generation of N-EC˙+ is well described by a diffusional kinetic model based on Smoluchowski theory: with Ph2I+PF6-, the derived bimolecular rate coefficient for ET is kET = (1.8 ± 0.5) × 1010 M-1 s-1 in DCM, which is consistent with diffusion-limited kinetics. This ET occurs from the first excited singlet (S1) state of N-EC, in competition with intersystem crossing to populate the triplet (T1) state, from which ET may also arise. A faster component of the ET reaction suggests pre-formation of a ground-state complex between N-EC and the electron acceptor. In ACN, the contribution from pre-reaction complexes is smaller, and the derived ET rate coefficient is kET = (1.0 ± 0.3) × 1010 M-1 s-1. Corresponding measurements for solutions of photoexcited 9-phenylcarbazole (9-PC) and Ph2I+PF6- give kET = (5 ± 1) × 109 M-1 s-1 in DCM. Structural modifications of the electron acceptor to increase its steric bulk reduce the magnitude of kET: methyl and t-butyl additions to the para positions of the phenyl rings (para Me2Ph2I+PF6- and t-butyl-Ph2I+PF6-) respectively give kET = (1.2 ± 0.3) × 1010 M-1 s-1 and kET = (5.4 ± 1.5) × 109 M-1 s-1 for reaction with photoexcited N-EC in DCM. These reductions in kET are attributed to slower rates of diffusion or to steric constraints in the ET reaction.

Vibrations of the guanine-cytosine pair in chloroform: an anharmonic computational study

We compute at the anharmonic level the vibrational spectra of the Watson-Crick dimer formed by guanosine (G) and cytidine (C) in chloroform, together with those of G, C and the most populated GG dimer. The spectra for deuterated and partially deuterated GC are also computed. We use DFT calculations, with B3LYP and CAM-B3LYP as reference functionals. Solvent effects from chloroform are included via the Polarizable Continuum Model (PCM), and by performing tests on models including up two chloroform molecules. Both B3LYP and CAM-B3LYP calculations reproduce the shape of the experimental spectra well in the fingerprint region (1500-1700 cm-1) and in the N-H stretching region (2800-3600 cm-1), with B3LYP providing better quantitative agreement with experiments. According to our calculations, the N-H amido streching mode of G falls at ∼2900 cm-1, while the N-H amino of G and C falls at ∼3100 cm-1 when hydrogen-bonded, or ∼3500 cm-1 when free. Overtone and combination bands strongly contribute to the absorption band at ∼3300 cm-1. Inclusion of bulk solvent effects significantly increases the accuracy of the computed spectra, while solute-solvent interactions have a smaller, though still noticeable, effect. Some key aspects of the anharmonic treatment of strongly vibrationally coupled supermolecular systems and the related methodological issues are also discussed.