Multimodal EEG-fMRI: advancing insight into large-scale human brain dynamics

Integrating fMRI spatial network dynamics and EEG spectral power: insights into resting state connectivity

Introduction

The Integration of functional magnetic resonance imaging (fMRI) and electroencephalography (EEG) has allowed for a novel exploration of the brain's spatial-temporal resolution. While functional brain networks show variations in both spatial and temporal dimensions, most studies focus on fixed spatial networks that change together over time.

Methods

In this study, for the first time, we link spatially dynamic brain networks with EEG spectral properties recorded simultaneously, which allows us to concurrently capture high spatial and temporal resolutions offered by these complementary imaging modalities. We estimated time-resolved brain networks using sliding window-based spatially constrained independent component analysis (scICA), producing resting brain networks that evolved over time at the voxel level. Next, we assessed their coupling with four time-varying EEG spectral power (delta, theta, alpha, and beta).

Results

Our analysis demonstrated how the networks' volumes and their voxel-level activities vary over time and revealed significant correlations with time-varying EEG spectral power. For instance, we found a strong association between increasing volume of the primary visual network and alpha band power, consistent with our hypothesis for eyes open resting state scan. Similarly, the alpha, theta, and delta power of the Pz electrode were localized to voxel-level activities of primary visual, cerebellum, and temporal networks, respectively. We also identified a strong correlation between the primary motor network and alpha (mu rhythm) and beta activity. This is consistent with motor tasks during rest, though this remains to be tested directly.

Discussion

These association between space and frequency observed during rest offer insights into the brain's spatial-temporal characteristics and enhance our understanding of both spatially varying fMRI networks and EEG band power.

Charting the neuroscience of interpersonal trust: A bibliographic literature review

Interpersonal trust is essential for societal well-being, underpinning relationships from individuals to institutions. Neuroscience research on trust has advanced swiftly since 2001. While quantitative reviews, meta-analyses, and theoretical frameworks have effectively synthesized trust neuroscience research, bibliometric analysis remains underutilized. Our bibliometric analysis aimed to provide a comprehensive overview of trust neuroscience's current state and future directions by examining its historical development, key contributors, geographic distribution, methodological paradigms, influential works, thematic trends, and overall impact. This field has been characterized by the input of a few key contributors through international collaboration, with significant contributions from the U.S., China, the Netherlands, and Germany. Research predominantly utilizes the trust game and fMRI, with a rising focus on neural networks, general trust, and differentiating behavioral from attitudinal trust. Integrating insights from psychology, economics, and sociology, this interdisciplinary field holds promise for advancing our understanding of trust through a neurobiological lens. In conclusion, our bibliographic literature review provides valuable insights and guidance for scholars, spotlighting potential avenues for further investigation in this fast-growing field.

Genetic fingerprinting with heritable phenotypes of the resting-state brain network topology

Cognitive, behavioral, and disease traits are influenced by both genetic and environmental factors. Individual differences in these traits have been associated with graph theoretical properties of resting-state networks, indicating that variations in connectome topology may be driven by genetics. In this study, we establish the heritability of global and local graph properties of resting-state networks derived from functional MRI (fMRI) and magnetoencephalography (MEG) using a large sample of twins and non-twin siblings from the Human Connectome Project. We examine the heritability of MEG in the source space, providing a more accurate estimate of genetic influences on electrophysiological networks. Our findings show that most graph measures are more heritable for MEG compared to fMRI and the heritability for MEG is greater for amplitude compared to phase synchrony in the delta, high beta, and gamma frequency bands. This suggests that the fast neuronal dynamics in MEG offer unique insights into the genetic basis of brain network organization. Furthermore, we demonstrate that brain network features can serve as genetic fingerprints to accurately identify pairs of identical twins within a cohort. These results highlight novel opportunities to relate individual connectome signatures to genetic mechanisms underlying brain function.

Review of the Brain's Behaviour after Injury and Disease for Its Application in an Agent-Based Model (ABM)

The brain is the most complex organ in the human body and, as such, its study entails great challenges (methodological, theoretical, etc.). Nonetheless, there is a remarkable amount of studies about the consequences of pathological conditions on its development and functioning. This bibliographic review aims to cover mostly findings related to changes in the physical distribution of neurons and their connections-the connectome-both structural and functional, as well as their modelling approaches. It does not intend to offer an extensive description of all conditions affecting the brain; rather, it presents the most common ones. Thus, here, we highlight the need for accurate brain modelling that can subsequently be used to understand brain function and be applied to diagnose, track, and simulate treatments for the most prevalent pathologies affecting the brain.

Multimodal Covariance Network Reflects Individual Cognitive Flexibility

Cognitive flexibility refers to the capacity to shift between patterns of mental function and relies on functional activity supported by anatomical structures. However, how the brain's structural-functional covarying is preconfigured in the resting state to facilitate cognitive flexibility under tasks remains unrevealed. Herein, we investigated the potential relationship between individual cognitive flexibility performance during the trail-making test (TMT) and structural-functional covariation of the large-scale multimodal covariance network (MCN) using magnetic resonance imaging (MRI) and electroencephalograph (EEG) datasets of 182 healthy participants. Results show that cognitive flexibility correlated significantly with the intra-subnetwork covariation of the visual network (VN) and somatomotor network (SMN) of MCN. Meanwhile, inter-subnetwork interactions across SMN and VN/default mode network/frontoparietal network (FPN), as well as across VN and ventral attention network (VAN)/dorsal attention network (DAN) were also found to be closely related to individual cognitive flexibility. After using resting-state MCN connectivity as representative features to train a multi-layer perceptron prediction model, we achieved a reliable prediction of individual cognitive flexibility performance. Collectively, this work offers new perspectives on the structural-functional coordination of cognitive flexibility and also provides neurobiological markers to predict individual cognitive flexibility.

Simultaneous and independent electroencephalography and magnetic resonance imaging: A multimodal neuroimaging dataset

We introduce an open access, multimodal neuroimaging dataset comprising simultaneously and independently collected Electroencephalography (EEG) and Magnetic Resonance Imaging (MRI) data from twenty healthy, young male individuals (mean age = 26 years; SD = 3.8 years). The dataset adheres to the BIDS standard specification and is structured into two components: 1) EEG data recorded outside the Magnetic Resonance (MR) environment, inside the MR scanner without image collection and during simultaneous functional MRI acquisition (EEG-fMRI) and 2) Functional MRI data acquired with and without simultaneous EEG recording and structural MRI data obtained with and without the participants wearing the EEG cap. EEG data were recorded with an MR-compatible EEG recording system (GES 400 MR, Electrical Geodesics Inc.) using a 32-channel sponge-based EEG cap (Geodesic Sensor Net). Eyes-closed resting-state EEG data were recorded for two minutes in both the outside and inside scanner conditions and for ten minutes during simultaneous EEG-fMRI. Eyes-open resting-state EEG data were recorded for two minutes under each condition. Participants also performed an eyes opening-eyes closure block-design task outside the scanner (two minutes) and during simultaneous EEG-fMRI (four minutes). The EEG data recorded outside the scanner provides a reference signal devoid of MR-related artifacts. The data collected inside the scanner without image acquisition captures the contribution of the ballistocardiographic (BCG) without the gradient artifact, making it suitable for testing and validating BCG artifact correction methods. The EEG-fMRI data is affected by both the gradient and BCG artifacts. Brain images were acquired using a 3T GE MR750-Discovery MR scanner equipped with a 32-channel head coil. Whole-brain functional images were obtained using a GRE-EPI T2* weighted sequence (TR = 2000 ms, TE = 40 ms, 35 interleaved axial slices with 4 mm isometric voxels). Structural images were acquired using an SPGR sequence (TR = 8.1 ms, TE = 3.2 ms, flip angle = 12°, 176 sagittal slices with 1 mm isometric voxels). This stands as one of the largest open access EEG-fMRI datasets available, which allows researchers to: 1) Assess the impact of gradient and BCG artifacts on EEG data, 2) Evaluate the effectiveness of novel artifact removal techniques to minimize artifact contribution and preserve EEG signal integrity, 3) Conduct hardware/setup comparison studies, 4) Evaluate the quality of structural and functional MRI data obtained with this particular EEG system, and 5) Implement and validate multimodal integrative analysis approaches on simultaneous EEG-fMRI data.

Transcriptomic and Macroscopic Architectures of Multimodal Covariance Network Reveal Molecular-Structural-Functional Co-alterations

Human cognition is usually underpinned by intrinsic structure and functional neural co-activation in spatially distributed brain regions. Owing to lacking an effective approach to quantifying the covarying of structure and functional responses, how the structural-functional circuits interact and how genes encode the relationships, to deepen our knowledge of human cognition and disease, are still unclear. Here, we propose a multimodal covariance network (MCN) construction approach to capture interregional covarying of the structural skeleton and transient functional activities for a single individual. We further explored the potential association between brain-wide gene expression patterns and structural-functional covarying in individuals involved in a gambling task and individuals with major depression disorder (MDD), adopting multimodal data from a publicly available human brain transcriptomic atlas and 2 independent cohorts. MCN analysis showed a replicable cortical structural-functional fine map in healthy individuals, and the expression of cognition- and disease phenotype-related genes was found to be spatially correlated with the corresponding MCN differences. Further analysis of cell type-specific signature genes suggests that the excitatory and inhibitory neuron transcriptomic changes could account for most of the observed correlation with task-evoked MCN differences. In contrast, changes in MCN of MDD patients were enriched for biological processes related to synapse function and neuroinflammation in astrocytes, microglia, and neurons, suggesting its promising application in developing targeted therapies for MDD patients. Collectively, these findings confirmed the correlations of MCN-related differences with brain-wide gene expression patterns, which captured genetically validated structural-functional differences at the cellular level in specific cognitive processes and psychiatric patients.

Advancing biomedical engineering: Leveraging Hjorth features for electroencephalography signal analysis

Biomedical engineering stands at the forefront of medical innovation, with electroencephalography (EEG) signal analysis providing critical insights into neural functions. This paper delves into the utilization of EEG signals within the MILimbEEG dataset to explore their potential for machine learning-based task recognition and diagnosis. Capturing the brain's electrical activity through electrodes 1 to 16, the signals are recorded in the time-domain in microvolts. An advanced feature extraction methodology harnessing Hjorth Parameters-namely Activity, Mobility, and Complexity-is employed to analyze the acquired signals. Through correlation analysis and examination of clustering behaviors, the study presents a comprehensive discussion on the emergent patterns within the data. The findings underscore the potential of integrating these features into machine learning algorithms for enhanced diagnostic precision and task recognition in biomedical applications. This exploration paves the way for future research where such signal processing techniques could revolutionize the efficiency and accuracy of biomedical engineering diagnostics.

On the Role of Neural Oscillations Across Timescales in Speech and Music Processing

This mini review is aimed at a clinician-scientist seeking to understand the role of oscillations in neural processing and their functional relevance in speech and music perception. We present an overview of neural oscillations, methods used to study them, and their functional relevance with respect to music processing, aging, hearing loss, and disorders affecting speech and language. We first review the oscillatory frequency bands and their associations with speech and music processing. Next we describe commonly used metrics for quantifying neural oscillations, briefly touching upon the still-debated mechanisms underpinning oscillatory alignment. Following this, we highlight key findings from research on neural oscillations in speech and music perception, as well as contributions of this work to our understanding of disordered perception in clinical populations. Finally, we conclude with a look toward the future of oscillatory research in speech and music perception, including promising methods and potential avenues for future work. We note that the intention of this mini review is not to systematically review all literature on cortical tracking of speech and music. Rather, we seek to provide the clinician-scientist with foundational information that can be used to evaluate and design research studies targeting the functional role of oscillations in speech and music processing in typical and clinical populations.

Automated pipeline for EEG artifact reduction (APPEAR) recorded during fMRI

Objective.Simultaneous electroencephalography-functional magnetic resonance imaging (EEG-fMRI) recordings offer a high spatiotemporal resolution approach to study human brain and understand the underlying mechanisms mediating cognitive and behavioral processes. However, the high susceptibility of EEG to MRI-induced artifacts hinders a broad adaptation of this approach. More specifically, EEG data collected during fMRI acquisition are contaminated with MRI gradients and ballistocardiogram artifacts, in addition to artifacts of physiological origin. There have been several attempts for reducing these artifacts with manual and time-consuming pre-processing, which may result in biasing EEG data due to variations in selecting steps order, parameters, and classification of artifactual independent components. Thus, there is a strong urge to develop a fully automatic and comprehensive pipeline for reducing all major EEG artifacts. In this work, we introduced an open-access toolbox with a fully automatic pipeline for reducing artifacts from EEG data collected simultaneously with fMRI (refer to APPEAR).Approach.The pipeline integrates average template subtraction and independent component analysis to suppress both MRI-related and physiological artifacts. To validate our results, we tested APPEAR on EEG data recorded from healthy control subjects during resting-state (n= 48) and task-based (i.e. event-related-potentials (ERPs);n= 8) paradigms. The chosen gold standard is an expert manual review of the EEG database.Main results.We compared manually and automated corrected EEG data during resting-state using frequency analysis and continuous wavelet transformation and found no significant differences between the two corrections. A comparison between ERP data recorded during a so-called stop-signal task (e.g. amplitude measures and signal-to-noise ratio) also showed no differences between the manually and fully automatic fMRI-EEG-corrected data.Significance.APPEAR offers the first comprehensive open-source toolbox that can speed up advancement of EEG analysis and enhance replication by avoiding experimenters' preferences while allowing for processing large EEG-fMRI cohorts composed of hundreds of subjects with manageable researcher time and effort.