An efficient neural network based method for medical image segmentation

Sequential Active Contour Based on Morphological-Driven Thresholding for Ultrasound Image Segmentation of Ascites

Paracentesis is a high-demanding and routine operation, which has great potentials and benefits if semi-autonomous procedures can be developed. One of the most important techniques that facilitate semi-autonomous paracentesis is to segment the ascites from ultrasound images accurately and efficiently. The ascites, however, is usually with significantly different shapes and noise among different patients, and its shape/size changes dynamically during the paracentesis. This makes most of existing image segmentation methods either time consuming or inaccurate for segmenting ascites from its background. In this article, we propose a two-stage active contour method to facilitate accurate and efficient segmentation of ascites. First, a morphological-driven thresholding method is developed to locate the initial contour of the ascites automatically. Then, the identified initial contour is fed into a novel sequential active contour algorithm to segment the ascites from background accurately. The proposed method is tested and compared with state-of-the-art active contour methods on over 100 real ultrasound images of ascites, and the results show the superiority of our method in both accuracy and time efficiency.

Survey of methods and principles in three-dimensional reconstruction from two-dimensional medical images

Three-dimensional (3D) reconstruction of human organs has gained attention in recent years due to advances in the Internet and graphics processing units. In the coming years, most patient care will shift toward this new paradigm. However, development of fast and accurate 3D models from medical images or a set of medical scans remains a daunting task due to the number of pre-processing steps involved, most of which are dependent on human expertise. In this review, a survey of pre-processing steps was conducted, and reconstruction techniques for several organs in medical diagnosis were studied. Various methods and principles related to 3D reconstruction were highlighted. The usefulness of 3D reconstruction of organs in medical diagnosis was also highlighted.

BUSIS: A Benchmark for Breast Ultrasound Image Segmentation

Breast ultrasound (BUS) image segmentation is challenging and critical for BUS computer-aided diagnosis (CAD) systems. Many BUS segmentation approaches have been studied in the last two decades, but the performances of most approaches have been assessed using relatively small private datasets with different quantitative metrics, which results in a discrepancy in performance comparison. Therefore, there is a pressing need for building a benchmark to compare existing methods using a public dataset objectively, to determine the performance of the best breast tumor segmentation algorithm available today, and to investigate what segmentation strategies are valuable in clinical practice and theoretical study. In this work, a benchmark for B-mode breast ultrasound image segmentation is presented. In the benchmark, (1) we collected 562 breast ultrasound images and proposed standardized procedures to obtain accurate annotations using four radiologists; (2) we extensively compared the performance of 16 state-of-the-art segmentation methods and demonstrated that most deep learning-based approaches achieved high dice similarity coefficient values (DSC ≥ 0.90) and outperformed conventional approaches; (3) we proposed the losses-based approach to evaluate the sensitivity of semi-automatic segmentation to user interactions; and (4) the successful segmentation strategies and possible future improvements were discussed in details.

Bayesian Approach for a Robust Speed-of-Sound Reconstruction Using Pulse-Echo Ultrasound

Computed ultrasound tomography in echo mode (CUTE) is a promising ultrasound (US) based multi-modal technique that allows to image the spatial distribution of speed of sound (SoS) inside tissue using hand-held pulse-echo US. It is based on measuring the phase shift of echoes when detected under varying steering angles. The SoS is then reconstructed using a regularized inversion of a forward model that describes the relation between the SoS and echo phase shift. Promising results were obtained in phantoms when using a Tikhonov-type regularization of the spatial gradient (SG) of SoS. In-vivo, however, clutter and aberration lead to an increased phase noise. In many subjects, this phase noise causes strong artifacts in the SoS image when using the SG regularization. To solve this shortcoming, we propose to use a Bayesian framework for the inverse calculation, which includes a priori statistical properties of the spatial distribution of the SoS to avoid noise-related artifacts in the SoS images. In this study, the a priori model is based on segmenting the B-Mode image. We show in a simulation and phantom study that this approach leads to SoS images that are much more stable against phase noise compared to the SG regularization. In a preliminary in-vivo study, a reproducibility in the range of 10 ms^-1 was achieved when imaging the SoS of a volunteer's liver from different scanning locations. These results demonstrate the diagnostic potential of CUTE for example for the staging of fatty liver disease.

Stereo Imaging Using Hardwired Self-Organizing Object Segmentation

Stereo vision utilizes two cameras to acquire two respective images, and then determines the depth map by calculating the disparity between two images. In general, object segmentation and stereo matching are some of the important technologies that are often used in establishing stereo vision systems. In this study, we implement a highly efficient self-organizing map (SOM) neural network hardware accelerator as unsupervised color segmentation for real-time stereo imaging. The stereo imaging system is established by pipelined, hierarchical architecture, which includes an SOM neural network module, a connected component labeling module, and a sum-of-absolute-difference-based stereo matching module. The experiment is conducted on a hardware resources-constrained embedded system. The performance of stereo imaging system is able to achieve 13.8 frames per second of 640 × 480 resolution color images.

An IoT Based Predictive Modelling for Predicting Lung Cancer Using Fuzzy Cluster Based Segmentation and Classification

In this paper, we propose a new Internet of Things (IoT) based predictive modelling by using fuzzy cluster based augmentation and classification for predicting the lung cancer disease through continuous monitoring and also to improve the healthcare by providing medical instructions. Here, the fuzzy clustering method is used and which is based on transition region extraction for effective image segmentation. Moreover, Fuzzy C-Means Clustering algorithm is used to categorize the transitional region features from the feature of lung cancer image. In this work, Otsu thresholding method is used for extracting the transition region from lung cancer image. Moreover, the right edge image and the morphological thinning operation are used for enhancing the performance of segmentation. In addition, the morphological cleaning and the image region filling operations are performed over an edge lung cancer image for getting the object regions. In addition, we also propose a new incremental classification algorithm which combines the existing Association Rule Mining (ARM), the standard Decision Tree (DT) with temporal features and the CNN. The experiments have been conducted by using the standard images that are collected from database and the current health data which are collected from patient through IoT devices. The results proved that the performance of the proposed prediction model which is able to achieve the better accuracy when it is compared with other existing prediction model.

Machine learning for medical ultrasound: status, methods, and future opportunities

Ultrasound (US) imaging is the most commonly performed cross-sectional diagnostic imaging modality in the practice of medicine. It is low-cost, non-ionizing, portable, and capable of real-time image acquisition and display. US is a rapidly evolving technology with significant challenges and opportunities. Challenges include high inter- and intra-operator variability and limited image quality control. Tremendous opportunities have arisen in the last decade as a result of exponential growth in available computational power coupled with progressive miniaturization of US devices. As US devices become smaller, enhanced computational capability can contribute significantly to decreasing variability through advanced image processing. In this paper, we review leading machine learning (ML) approaches and research directions in US, with an emphasis on recent ML advances. We also present our outlook on future opportunities for ML techniques to further improve clinical workflow and US-based disease diagnosis and characterization.

Efficient Segmentation of a Breast in B-Mode Ultrasound Tomography Using Three-Dimensional GrabCut (GC3D)

As an emerging modality for whole breast imaging, ultrasound tomography (UST), has been adopted for diagnostic purposes. Efficient segmentation of an entire breast in UST images plays an important role in quantitative tissue analysis and cancer diagnosis, while major existing methods suffer from considerable time consumption and intensive user interaction. This paper explores three-dimensional GrabCut (GC3D) for breast isolation in thirty reflection (B-mode) UST volumetric images. The algorithm can be conveniently initialized by localizing points to form a polygon, which covers the potential breast region. Moreover, two other variations of GrabCut and an active contour method were compared. Algorithm performance was evaluated from volume overlap ratios ( T O , target overlap; M O , mean overlap; F P , false positive; F N , false negative) and time consumption. Experimental results indicate that GC3D considerably reduced the work load and achieved good performance ( T O = 0.84; M O = 0.91; F P = 0.006; F N = 0.16) within an average of 1.2 min per volume. Furthermore, GC3D is not only user friendly, but also robust to various inputs, suggesting its great potential to facilitate clinical applications during whole-breast UST imaging. In the near future, the implemented GC3D can be easily automated to tackle B-mode UST volumetric images acquired from the updated imaging system.

A prediction model of blood pressure for telemedicine

This paper presents a new study based on a machine learning technique, specifically an artificial neural network, for predicting systolic blood pressure through the correlation of variables (age, BMI, exercise level, alcohol consumption level, smoking status, stress level, and salt intake level). The study was carried out using a database containing a variety of variables/factors. Each database of raw data was split into two parts: one part for training the neural network and the remaining part for testing the performance of the network. Two neural network algorithms, back-propagation and radial basis function, were used to construct and validate the prediction system. According to the experiment, the accuracy of our predictions of systolic blood pressure values exceeded 90%. Our experimental results show that artificial neural networks are suitable for modeling and predicting systolic blood pressure. This new method of predicting systolic blood pressure helps to give an early warning to adults, who may not get regular blood pressure measurements that their blood pressure might be at an unhealthy level. Also, because an isolated measurement of blood pressure is not always very accurate due to daily fluctuations, our predictor can provide the predicted value as another figure for medical staff to refer to.

An Improved CAD System for Breast Cancer Diagnosis Based on Generalized Pseudo-Zernike Moment and Ada-DEWNN Classifier

In this paper, a novel framework of computer-aided diagnosis (CAD) system has been presented for the classification of benign/malignant breast tissues. The properties of the generalized pseudo-Zernike moments (GPZM) and pseudo-Zernike moments (PZM) are utilized as suitable texture descriptors of the suspicious region in the mammogram. An improved classifier- adaptive differential evolution wavelet neural network (Ada-DEWNN) is proposed to improve the classification accuracy of the CAD system. The efficiency of the proposed system is tested on mammograms from the Mammographic Image Analysis Society (mini-MIAS) database using the leave-one-out cross validation as well as on mammograms from the Digital Database for Screening Mammography (DDSM) database using 10-fold cross validation. The proposed method on MIAS-database attains a fair accuracy of 0.8938 and AUC of 0.935 (95 % CI = 0.8213-0.9831). The proposed method is also tested for in-plane rotation and found to be highly rotation invariant. In addition, the proposed classifier is tested and compared with some well-known existing methods using receiver operating characteristic (ROC) analysis using DDSM- database. It is concluded the proposed classifier has better area under the curve (AUC) (0.9289) and highly précised with 95 % CI, 0.8216 to 0.9834 and 0.0384 standard error.

Application of wavelet techniques for cancer diagnosis using ultrasound images: A Review

Ultrasound is an important and low cost imaging modality used to study the internal organs of human body and blood flow through blood vessels. It uses high frequency sound waves to acquire images of internal organs. It is used to screen normal, benign and malignant tissues of various organs. Healthy and malignant tissues generate different echoes for ultrasound. Hence, it provides useful information about the potential tumor tissues that can be analyzed for diagnostic purposes before therapeutic procedures. Ultrasound images are affected with speckle noise due to an air gap between the transducer probe and the body. The challenge is to design and develop robust image preprocessing, segmentation and feature extraction algorithms to locate the tumor region and to extract subtle information from isolated tumor region for diagnosis. This information can be revealed using a scale space technique such as the Discrete Wavelet Transform (DWT). It decomposes an image into images at different scales using low pass and high pass filters. These filters help to identify the detail or sudden changes in intensity in the image. These changes are reflected in the wavelet coefficients. Various texture, statistical and image based features can be extracted from these coefficients. The extracted features are subjected to statistical analysis to identify the significant features to discriminate normal and malignant ultrasound images using supervised classifiers. This paper presents a review of wavelet techniques used for preprocessing, segmentation and feature extraction of breast, thyroid, ovarian and prostate cancer using ultrasound images.

Concise and Accessible Representations for Multidimensional Datasets: Introducing a Framework Based on thenD-EVM and Kohonen Networks

A new framework intended for representing and segmenting multidimensional datasets resulting in low spatial complexity requirements and with appropriate access to their contained information is described. Two steps are going to be taken in account. The first step is to specify (n-1)D hypervoxelizations,n≥2, as Orthogonal Polytopes whosenth dimension corresponds to color intensity. Then, thenD representation is concisely expressed via the Extreme Vertices Model in then-Dimensional Space (nD-EVM). Some examples are presented, which, under our methodology, have storing requirements minor than those demanded by their original hypervoxelizations. In the second step, 1-Dimensional Kohonen Networks (1D-KNs) are applied in order to segment datasets taking in account their geometrical and topological properties providing a non-supervised way to compact even more the proposedn-Dimensional representations. The application of our framework shares compression ratios, for our set of study cases, in the range 5.6496 to 32.4311. Summarizing, the contribution combines the power of thenD-EVM and 1D-KNs by producing very concise datasets’ representations. We argue that the new representations also provide appropriate segmentations by introducing some error functions such that our 1D-KNs classifications are compared against classifications based only in color intensities. Along the work, main properties and algorithms behind thenD-EVM are introduced for the purpose of interrogating the final representations in such a way that it efficiently obtains useful geometrical and topological information.