1
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Jodra A, García-Iriepa C, Frutos LM. An Algorithm Predicting the Optimal Mechanical Response of Electronic Energy Difference. J Chem Theory Comput 2023; 19:6392-6401. [PMID: 37669417 PMCID: PMC10536970 DOI: 10.1021/acs.jctc.3c00490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Indexed: 09/07/2023]
Abstract
The use of mechanical forces at the molecular level has been shown to be an interesting tool for modulating different chemical and physical molecular properties. The so-called covalent mechanochemistry deals with the application of precise mechanical forces that induce specific changes in the structure, stability, reactivity, and other physical properties. The use of this kind of force to modulate photophysical properties and photochemical reactivity has also been studied. Nevertheless, the general problem of mechanical modulation of the energy gap between two electronic states has been addressed only with the development of simple theoretical models. Here, we develop and implement an algorithm providing the Largest energy Gap variation with Minimal mechanical Force (LGMF) that allows the determination of the optimal mechanical forces tuning the electronic energy gap, as well as to identify the maximum mechanical response of a molecular system to the application of any mechanical stimulus. The algorithm has been implemented for diverse molecular systems showing different degrees of flexibility. The phyton code of the algorithm is available in a public repository.
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Affiliation(s)
- Alejandro Jodra
- Departamento
de Química Analítica, Química Física e
Ingeniería Química, y Grupo de Reactividad y Estructura
Molecular (RESMOL), Universidad de Alcalá, Alcalá de Henares, 28806 Madrid, Spain
| | - Cristina García-Iriepa
- Departamento
de Química Analítica, Química Física e
Ingeniería Química, y Grupo de Reactividad y Estructura
Molecular (RESMOL), Universidad de Alcalá, Alcalá de Henares, 28806 Madrid, Spain
- Instituto
de Investigación Química ‘‘Andrés
M. del Río’’ (IQAR), Universidad de Alcalá, Alcalá de Henares, 28806 Madrid, Spain
| | - Luis Manuel Frutos
- Departamento
de Química Analítica, Química Física e
Ingeniería Química, y Grupo de Reactividad y Estructura
Molecular (RESMOL), Universidad de Alcalá, Alcalá de Henares, 28806 Madrid, Spain
- Instituto
de Investigación Química ‘‘Andrés
M. del Río’’ (IQAR), Universidad de Alcalá, Alcalá de Henares, 28806 Madrid, Spain
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2
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Jodra A, García-Iriepa C, Frutos LM. Mechanical Activation of Forbidden Photoreactivity in Oxa-di-π-methane Rearrangement. J Org Chem 2022; 87:12586-12595. [PMID: 36166757 PMCID: PMC9552220 DOI: 10.1021/acs.joc.2c00720] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
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In this work, we demonstrate that the forbidden oxirane-type
photoproduct
(the cyclopropyl ketone photoproduct is the allowed one) of the oxa-di-π-methane
photorearrangement can be obtained by mechanochemical control of the
photoreactions. This control is achieved by the application of simple
force pairs rationally chosen. By analyzing in detail the effect of
the applied forces on this photoreaction, it comes to light that the
mechanical action affects the diverse properties of the oxa-di-π-methane
rearrangement, modifying all the steps of the reaction: (i) the initial
ground-state conformers’ distribution becomes affected; (ii)
the new conformational population makes the triplet excitation process
to be changed, responding to the magnitude of the applied force; (iii)
the stability of the different intermediates along the triplet pathway
also becomes affected, changing the dynamical behavior of the system
and the reaction kinetics; and (iv) the intersystem crossing also
becomes strongly affected, making the forbidden oxirane-type photoproduct
to decay more efficiently to the ground state. All these changes provide
a complex scenario where a detailed study of the effect of applied
forces is necessary in order to predict its overall effect on the
photoreactivity.
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Affiliation(s)
- Alejandro Jodra
- Universidad de Alcalá, Departamento de Química Analítica, Química Física e Ingeniería Química, Grupo de Reactividad y Estructura Molecular (RESMOL), Alcalá de Henares 28806, Madrid, Spain
| | - Cristina García-Iriepa
- Universidad de Alcalá, Departamento de Química Analítica, Química Física e Ingeniería Química, Grupo de Reactividad y Estructura Molecular (RESMOL), Alcalá de Henares 28806, Madrid, Spain.,Instituto de Investigación Química ''Andrés M. del Río'' (IQAR), Universidad de Alcalá, Alcalá de Henares 28806, Madrid, Spain
| | - Luis Manuel Frutos
- Universidad de Alcalá, Departamento de Química Analítica, Química Física e Ingeniería Química, Grupo de Reactividad y Estructura Molecular (RESMOL), Alcalá de Henares 28806, Madrid, Spain.,Instituto de Investigación Química ''Andrés M. del Río'' (IQAR), Universidad de Alcalá, Alcalá de Henares 28806, Madrid, Spain
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3
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Mier LJ, Adam G, Kumar S, Stauch T. The Mechanism of Flex-Activation in Mechanophores Revealed By Quantum Chemistry. Chemphyschem 2020; 21:2402-2406. [PMID: 32964598 PMCID: PMC7702058 DOI: 10.1002/cphc.202000739] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Indexed: 12/11/2022]
Abstract
Flex-activated mechanophores can be used for small-molecule release in polymers under tension by rupture of covalent bonds that are orthogonal to the polymer main chain. Using static and dynamic quantum chemical methods, we here juxtapose three different mechanical deformation modes in flex-activated mechanophores (end-to-end stretching, direct pulling of the scissile bonds, bond angle bendings) with the aim of proposing ways to optimize the efficiency of flex-activation in experiments. It is found that end-to-end stretching, which is a traditional approach to activate mechanophores in polymers, does not trigger flex-activation, whereas direct pulling of the scissile bonds or displacement of adjacent bond angles are efficient methods to achieve this goal. Based on the structural, energetic and electronic effects responsible for these observations, we propose ways of weakening the scissile bonds experimentally to increase the efficiency of flex-activation.
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Affiliation(s)
- Lennart J. Mier
- University of BremenInstitute for Physical and Theoretical ChemistryLeobener Straße NW2D-28359BremenGermany
- Current address: University of Bremen, UFTLeobener Str. 6D-28359BremenGermany
| | - Gheorghe Adam
- University of BremenInstitute for Physical and Theoretical ChemistryLeobener Straße NW2D-28359BremenGermany
| | - Sourabh Kumar
- University of BremenInstitute for Physical and Theoretical ChemistryLeobener Straße NW2D-28359BremenGermany
| | - Tim Stauch
- University of BremenInstitute for Physical and Theoretical ChemistryLeobener Straße NW2D-28359BremenGermany
- University of BremenBremen Center for Computational Materials ScienceAm Fallturm 1D-28359BremenGermany
- University of BremenMAPEX Center for Materials and ProcessesBibliothekstraße 1D-28359BremenGermany
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4
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Stauch T, Chakraborty R, Head-Gordon M. Quantum Chemical Modeling of Pressure-Induced Spin Crossover in Octahedral Metal-Ligand Complexes. Chemphyschem 2019; 20:2742-2747. [PMID: 31538686 PMCID: PMC6899727 DOI: 10.1002/cphc.201900853] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 09/19/2019] [Indexed: 11/12/2022]
Abstract
Spin state switching on external stimuli is a phenomenon with wide applicability, ranging from molecular electronics to gas activation in nanoporous frameworks. Here, we model the spin crossover as a function of the hydrostatic pressure in octahedrally coordinated transition metal centers by applying a field of effective nuclear forces that compress the molecule towards its centroid. For spin crossover in first-row transition metals coordinated by hydrogen, nitrogen, and carbon monoxide, we find the pressure required for spin transition to be a function of the ligand position in the spectrochemical sequence. While pressures on the order of 1 GPa are required to flip spins in homogeneously ligated octahedral sites, we demonstrate a fivefold decrease in spin transition pressure for the archetypal strong field ligand carbon monoxide in octahedrally coordinated Fe2+ in [Fe(II)(NH3 )5 CO]2+ .
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Affiliation(s)
- Tim Stauch
- University of Bremen, Institute for Physical and Theoretical Chemistry, Leobener Str. NW2, 28359, Bremen, Germany.,Kenneth S. Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California, 94720, United States of America
| | - Romit Chakraborty
- Kenneth S. Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California, 94720, United States of America.,Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, 94720, United States of America
| | - Martin Head-Gordon
- Kenneth S. Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California, 94720, United States of America.,Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, 94720, United States of America
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5
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García-Iriepa C, Sampedro D, Mendicuti F, Léonard J, Frutos LM. Photoreactivity Control Mediated by Molecular Force Probes in Stilbene. J Phys Chem Lett 2019; 10:1063-1067. [PMID: 30707586 DOI: 10.1021/acs.jpclett.8b03802] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
We report theoretical and experimental evidence showing that photochemical reactivity of a chromophore can be modified by applying mechanical forces via molecular force probes. This mechanical action permits us to modulate main photochemical properties, such as fluorescence yield, excited-state lifetime, or photoisomerization quantum yield. The effect of molecular force probes can be rationalized in terms of simple mechanochemical models, establishing a qualitative framework for understanding the mechanical control of photoreactivity in stilbenes.
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Affiliation(s)
- Cristina García-Iriepa
- Departamento de Química Analítica, Química Física e Ingeniería Química , Universidad de Alcalá , E-28871 Alcalá de Henares, Madrid , Spain
- Departamento de Química, Centro de Investigación en Síntesis Química (CISQ) , Universidad de La Rioja , E-26006 Logroño , Spain
| | - Diego Sampedro
- Departamento de Química, Centro de Investigación en Síntesis Química (CISQ) , Universidad de La Rioja , E-26006 Logroño , Spain
| | - Francisco Mendicuti
- Departamento de Química Analítica, Química Física e Ingeniería Química , Universidad de Alcalá , E-28871 Alcalá de Henares, Madrid , Spain
- Instituto de Investigación Química "Andrés M. del Río" , Universidad de Alcalá , 28805 Alcalá de Henares, Madrid , Spain
| | - Jérémie Léonard
- Institut de Physique et Chimie des Matériaux de Strasbourg , Université de Strasbourg , CNRS, UMR 7504 and Labex NIE, 67034 Strasbourg , France
| | - Luis Manuel Frutos
- Departamento de Química Analítica, Química Física e Ingeniería Química , Universidad de Alcalá , E-28871 Alcalá de Henares, Madrid , Spain
- Instituto de Investigación Química "Andrés M. del Río" , Universidad de Alcalá , 28805 Alcalá de Henares, Madrid , Spain
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6
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Bettens T, Alonso M, Geerlings P, De Proft F. Implementing the mechanical force into the conceptual DFT framework: understanding and predicting molecular mechanochemical properties. Phys Chem Chem Phys 2019; 21:7378-7388. [DOI: 10.1039/c8cp07349j] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Studying mechanochemical properties through the implementation of the mechanical force into the conceptual DFT framework (E = E[N,v,Fext]).
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Affiliation(s)
- Tom Bettens
- Algemene Chemie (ALGC)
- Vrije Universiteit Brussel (VUB)
- Pleinlaan 2
- 1050 Brussels
- Belgium
| | - Mercedes Alonso
- Algemene Chemie (ALGC)
- Vrije Universiteit Brussel (VUB)
- Pleinlaan 2
- 1050 Brussels
- Belgium
| | - Paul Geerlings
- Algemene Chemie (ALGC)
- Vrije Universiteit Brussel (VUB)
- Pleinlaan 2
- 1050 Brussels
- Belgium
| | - Frank De Proft
- Algemene Chemie (ALGC)
- Vrije Universiteit Brussel (VUB)
- Pleinlaan 2
- 1050 Brussels
- Belgium
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7
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Valentini A, Rivero D, Zapata F, García-Iriepa C, Marazzi M, Palmeiro R, Fdez. Galván I, Sampedro D, Olivucci M, Frutos LM. Optomechanical Control of Quantum Yield in Trans
-Cis
Ultrafast Photoisomerization of a Retinal Chromophore Model. Angew Chem Int Ed Engl 2017; 56:3842-3846. [DOI: 10.1002/anie.201611265] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2016] [Revised: 01/12/2017] [Indexed: 11/06/2022]
Affiliation(s)
- Alessio Valentini
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
- Department of Biotechnology; Chemistry and Pharmacy; University of Siena; via A. Moro 2 53100 Siena Italy
| | - Daniel Rivero
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
| | - Felipe Zapata
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
| | - Cristina García-Iriepa
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
- Departamento de Química; Centro de Investigación en Síntesis Química (CISQ); University of La Rioja; Madre de Dios, 53 26006 Logroño Spain
| | - Marco Marazzi
- Theory-Modeling-Simulation SRSMC; Université de Lorraine-Nancy; Vandoeuvre-lès-Nancy, Nancy France
- Theory-Modeling-Simulation SRSMC; CNRS; SRSMC Boulevard des Aiguillettes Vandoeuvre-lès-Nancy France
| | - Raúl Palmeiro
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
| | - Ignacio Fdez. Galván
- Department of Chemistry-Ångström; Uppsala Center for Computational Chemistry-UC 3; Uppsala University; Box 518 75120 Uppsala Sweden
| | - Diego Sampedro
- Departamento de Química; Centro de Investigación en Síntesis Química (CISQ); University of La Rioja; Madre de Dios, 53 26006 Logroño Spain
| | - Massimo Olivucci
- Department of Biotechnology; Chemistry and Pharmacy; University of Siena; via A. Moro 2 53100 Siena Italy
- Department of Chemistry; Bowling Green State University; Bowling Green OH 43403 USA
- USIAS and Institut de Physique et Chimie des Matériaux de Strasbourg; Université de Strasbourg-CNRS; 67034 Strasbourg France
| | - Luis Manuel Frutos
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
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8
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Valentini A, Rivero D, Zapata F, García-Iriepa C, Marazzi M, Palmeiro R, Fdez. Galván I, Sampedro D, Olivucci M, Frutos LM. Optomechanical Control of Quantum Yield in Trans
-Cis
Ultrafast Photoisomerization of a Retinal Chromophore Model. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201611265] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Alessio Valentini
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
- Department of Biotechnology; Chemistry and Pharmacy; University of Siena; via A. Moro 2 53100 Siena Italy
| | - Daniel Rivero
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
| | - Felipe Zapata
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
| | - Cristina García-Iriepa
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
- Departamento de Química; Centro de Investigación en Síntesis Química (CISQ); University of La Rioja; Madre de Dios, 53 26006 Logroño Spain
| | - Marco Marazzi
- Theory-Modeling-Simulation SRSMC; Université de Lorraine-Nancy; Vandoeuvre-lès-Nancy, Nancy France
- Theory-Modeling-Simulation SRSMC; CNRS; SRSMC Boulevard des Aiguillettes Vandoeuvre-lès-Nancy France
| | - Raúl Palmeiro
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
| | - Ignacio Fdez. Galván
- Department of Chemistry-Ångström; Uppsala Center for Computational Chemistry-UC 3; Uppsala University; Box 518 75120 Uppsala Sweden
| | - Diego Sampedro
- Departamento de Química; Centro de Investigación en Síntesis Química (CISQ); University of La Rioja; Madre de Dios, 53 26006 Logroño Spain
| | - Massimo Olivucci
- Department of Biotechnology; Chemistry and Pharmacy; University of Siena; via A. Moro 2 53100 Siena Italy
- Department of Chemistry; Bowling Green State University; Bowling Green OH 43403 USA
- USIAS and Institut de Physique et Chimie des Matériaux de Strasbourg; Université de Strasbourg-CNRS; 67034 Strasbourg France
| | - Luis Manuel Frutos
- Department of Analytical Chemistry; Physical Chemistry and Chemical Engineering; University of Alcalá; Ctra. A2 Km 33,6 28871 Alcalá de Henares Spain
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9
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Fernández-González MÁ, Rivero D, García-Iriepa C, Sampedro D, Frutos LM. Mechanochemical Tuning of Pyrene Absorption Spectrum Using Force Probes. J Chem Theory Comput 2017; 13:727-736. [DOI: 10.1021/acs.jctc.6b01020] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
| | - Daniel Rivero
- Química
Física, Universidad de Alcalá, E-28871 Alcalá
de Henares, Madrid, Spain
| | - Cristina García-Iriepa
- Química
Física, Universidad de Alcalá, E-28871 Alcalá
de Henares, Madrid, Spain
- Departamento
de Química, Centro de Investigación en Síntesis Química (CISQ), Madre de Dios, 53, E-26006 Logroño, Spain
| | - Diego Sampedro
- Departamento
de Química, Centro de Investigación en Síntesis Química (CISQ), Madre de Dios, 53, E-26006 Logroño, Spain
| | - Luis Manuel Frutos
- Química
Física, Universidad de Alcalá, E-28871 Alcalá
de Henares, Madrid, Spain
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10
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Rivero D, Valentini A, Fernández-González MÁ, Zapata F, García-Iriepa C, Sampedro D, Palmeiro R, Frutos LM. Mechanical Forces Alter Conical Intersections Topology. J Chem Theory Comput 2015; 11:3740-5. [DOI: 10.1021/acs.jctc.5b00375] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Daniel Rivero
- Química
Física, Universidad de Alcalá, E- 28871 Alcalá de Henares, Madrid, Spain
| | - Alessio Valentini
- Química
Física, Universidad de Alcalá, E- 28871 Alcalá de Henares, Madrid, Spain
- Department
of Biotechnology, Chemistry and Pharmacy, University of Siena, Siena, Italy
| | | | - Felipe Zapata
- Química
Física, Universidad de Alcalá, E- 28871 Alcalá de Henares, Madrid, Spain
| | - Cristina García-Iriepa
- Química
Física, Universidad de Alcalá, E- 28871 Alcalá de Henares, Madrid, Spain
- Departamento
de Química, Centro de Investigación en Síntesis Química (CISQ), Madre de Dios, 51, E-26006, Logroño, Spain
| | - Diego Sampedro
- Departamento
de Química, Centro de Investigación en Síntesis Química (CISQ), Madre de Dios, 51, E-26006, Logroño, Spain
| | - Raúl Palmeiro
- Química
Física, Universidad de Alcalá, E- 28871 Alcalá de Henares, Madrid, Spain
| | - Luis Manuel Frutos
- Química
Física, Universidad de Alcalá, E- 28871 Alcalá de Henares, Madrid, Spain
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