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Lee ZR, Quinn LJ, Jones CW, Hayes SE, Dixon DA. Predicting the Mechanism and Products of CO 2 Capture by Amines in the Presence of H 2O. J Phys Chem A 2021; 125:9802-9818. [PMID: 34748350 DOI: 10.1021/acs.jpca.1c05950] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
An extensive correlated molecular orbital theory study of the reactions of CO2 with a range of substituted amines and H2O in the gas phase and aqueous solution was performed at the G3(MP2) level with a self-consistent reaction field approach. The G3(MP2) calculations were benchmarked at the CCSD(T)/CBS level for NH3 reactions. A catalytic NH3 reduces the energy barrier more than a catalytic H2O for the formation of H2NCOOH and H2CO3. In aqueous solution, the barriers to form both H2NCOOH and H2CO3 are reduced, with HCO3- formation possible with one amine present and H2NCOO- formation possible only with two amines. Further reactions of H2NCOOH to form HNCO and urea via the Bazarov reaction have high barriers and are unlikely in both the gas phase and aqueous solution. Reaction coordinates for CH3NH2, CH3CH2NH2, (CH3)2NH, CH3CH2CH2NH2, (CH3)3N, and DMAP were also calculated. The barrier for proton transfer correlates with amine basicity for alkylammonium carbamate (ΔG‡aq < 15 kcal/mol) and alkylammonium bicarbonate (ΔG‡aq < 30 kcal/mol) formation. In aqueous solution, carbamic acids, carbamates, and bicarbonates can all form in small amounts with ammonium carbamates dominating for primary and secondary alkylamines. These results have implications for CO2 capture by amines in both the gas phase and aqueous solution as well as in the solid state, if enough water is present.
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Affiliation(s)
- Zachary R Lee
- Department of Chemistry and Biochemistry, University of Alabama, Tuscaloosa, Alabama 35487, United States.,Department of Biology and Chemistry, Morehead State University, Morehead, Kentucky 40351, United States
| | - La'Darious J Quinn
- Department of Chemistry and Biochemistry, University of Alabama, Tuscaloosa, Alabama 35487, United States
| | - Christopher W Jones
- School of Chemical & Biomolecular Engineering, Georgia Institute of Technology, 311 Ferst Drive, Atlanta, Georgia 30332, United States
| | - Sophia E Hayes
- Department of Chemistry, Washington University, 1 Brookings Drive, Saint Louis, Missouri 63130, United States
| | - David A Dixon
- Department of Chemistry and Biochemistry, University of Alabama, Tuscaloosa, Alabama 35487, United States
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Yang M, Bonati L, Polino D, Parrinello M. Using metadynamics to build neural network potentials for reactive events: the case of urea decomposition in water. Catal Today 2021. [DOI: 10.1016/j.cattod.2021.03.018] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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Berends AC, van de Haar MA, Krames MR. YAG:Ce 3+ Phosphor: From Micron-Sized Workhorse for General Lighting to a Bright Future on the Nanoscale. Chem Rev 2020; 120:13461-13479. [PMID: 33164489 DOI: 10.1021/acs.chemrev.0c00618] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The renowned yellow phosphor yttrium aluminum garnet (YAG) doped with trivalent cerium has found its way into applications in many forms: as powder of micron sized crystals, as a ceramic, and even as a single crystal. However, additional technological advancement requires providing this material in new form factors, especially in terms of particle size. Where many materials have been developed on the nanoscale with excellent optical properties (e.g., semiconductor quantum dots, perovskite nanocrystals, and rare earth doped phosphors), it is surprising that the development of nanocrystalline YAG:Ce is not as mature as for these other materials. Control over size and shape is still in its infancy, and optical properties are not yet at the same level as other materials on the nanoscale, even though YAG:Ce microcrystalline materials exceed the performance of most other materials. This review highlights developments in synthesis methods and mechanisms and gives an overview of the state of the art morphologies, particle sizes, and optical properties of YAG:Ce on the nanoscale.
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Affiliation(s)
- Anne C Berends
- Seaborough Research BV, Matrix VII Innovation Center, Science Park 106, 1098 XG Amsterdam, The Netherlands
| | - Marie Anne van de Haar
- Seaborough Research BV, Matrix VII Innovation Center, Science Park 106, 1098 XG Amsterdam, The Netherlands
| | - Michael R Krames
- Seaborough Research BV, Matrix VII Innovation Center, Science Park 106, 1098 XG Amsterdam, The Netherlands.,Arkesso LLC, 2625 Middlefield Road, No. 687, Palo Alto, California 94306, United States
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Gratzfeld D, Heitkämper J, Debailleul J, Olzmann M. On the influence of water on urea condensation reactions: a theoretical study. Z PHYS CHEM 2020. [DOI: 10.1515/zpch-2020-1658] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
The influence of water molecules on the kinetics of urea condensation reactions was studied with high-level quantum chemical methods and statistical rate theory. The study focuses on the production of biuret, triuret, and cyanuric acid from urea because of their relevance as unwanted byproducts in the urea-based selective catalytic reduction (urea-SCR) exhaust after treatment of Diesel engines. In order to characterize the potential energy surfaces and molecular reaction pathways, calculations with explicitly-correlated coupled-cluster methods were performed. It turned out that the reactions proceed via pre-reactive complexes and the inclusion of one or two water molecules into the condensation mechanisms leads to a decrease of the energy barriers. This effect is particularly pronounced in the production of biuret. Due to the pre-reactive equilibria, the rates of the overall reactions can increase or decrease by incorporating water into the mechanism, depending on the temperature and water concentration. Under the conditions of urea-SCR, the studied reactions are too slow to contribute to the observed byproduct formation.
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Affiliation(s)
- Dennis Gratzfeld
- Institut für Physikalische Chemie, Karlsruher Institut für Technologie (KIT) , Kaiserstr. 12 , 76131 Karlsruhe , Germany
| | - Juliane Heitkämper
- Institut für Physikalische Chemie, Karlsruher Institut für Technologie (KIT) , Kaiserstr. 12 , 76131 Karlsruhe , Germany
| | - Julien Debailleul
- Institut für Physikalische Chemie, Karlsruher Institut für Technologie (KIT) , Kaiserstr. 12 , 76131 Karlsruhe , Germany
| | - Matthias Olzmann
- Institut für Physikalische Chemie, Karlsruher Institut für Technologie (KIT) , Kaiserstr. 12 , 76131 Karlsruhe , Germany
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van Gelder MK, Jong JAW, Folkertsma L, Guo Y, Blüchel C, Verhaar MC, Odijk M, Van Nostrum CF, Hennink WE, Gerritsen KGF. Urea removal strategies for dialysate regeneration in a wearable artificial kidney. Biomaterials 2020; 234:119735. [PMID: 31958714 DOI: 10.1016/j.biomaterials.2019.119735] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Revised: 12/05/2019] [Accepted: 12/25/2019] [Indexed: 12/31/2022]
Abstract
The availability of a wearable artificial kidney (WAK) that provides dialysis outside the hospital would be an important advancement for dialysis patients. The concept of a WAK is based on regeneration of a small volume of dialysate in a closed-loop. Removal of urea, the primary waste product of nitrogen metabolism, is the major challenge for the realization of a WAK since it is a molecule with low reactivity that is difficult to adsorb while it is the waste solute with the highest daily molar production. Currently, no efficient urea removal technology is available that allows for miniaturization of the WAK to a size and weight that is acceptable for patients to carry. Several urea removal strategies have been explored, including enzymatic hydrolysis by urease, electro-oxidation and sorbent systems. However, thus far, these methods have toxic side effects, limited removal capacity or slow removal kinetics. This review discusses different urea removal strategies for application in a wearable dialysis device, from both a chemical and a medical perspective.
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Affiliation(s)
- Maaike K van Gelder
- Department of Nephrology and Hypertension, University Medical Center Utrecht, Heidelberglaan 100, 3584 CX, Utrecht, the Netherlands
| | - Jacobus A W Jong
- Department of Nephrology and Hypertension, University Medical Center Utrecht, Heidelberglaan 100, 3584 CX, Utrecht, the Netherlands; Department of Pharmaceutics, Utrecht Institute for Pharmaceutical Sciences (UIPS), Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, the Netherlands
| | - Laura Folkertsma
- Department of Nephrology and Hypertension, University Medical Center Utrecht, Heidelberglaan 100, 3584 CX, Utrecht, the Netherlands; BIOS-Lab on a Chip Group, MESA+ Institute of Nanotechnology, Technical Medical Center, Max Planck Center for Complex Fluid Dynamics, University of Twente, 7522 NH, Enschede, the Netherlands
| | - Yong Guo
- Department of Pharmaceutics, Utrecht Institute for Pharmaceutical Sciences (UIPS), Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, the Netherlands
| | | | - Marianne C Verhaar
- Department of Nephrology and Hypertension, University Medical Center Utrecht, Heidelberglaan 100, 3584 CX, Utrecht, the Netherlands
| | - Mathieu Odijk
- BIOS-Lab on a Chip Group, MESA+ Institute of Nanotechnology, Technical Medical Center, Max Planck Center for Complex Fluid Dynamics, University of Twente, 7522 NH, Enschede, the Netherlands
| | - Cornelus F Van Nostrum
- Department of Pharmaceutics, Utrecht Institute for Pharmaceutical Sciences (UIPS), Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, the Netherlands
| | - Wim E Hennink
- Department of Pharmaceutics, Utrecht Institute for Pharmaceutical Sciences (UIPS), Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, the Netherlands
| | - Karin G F Gerritsen
- Department of Nephrology and Hypertension, University Medical Center Utrecht, Heidelberglaan 100, 3584 CX, Utrecht, the Netherlands.
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Polino D, Parrinello M. Kinetics of Aqueous Media Reactions via Ab Initio Enhanced Molecular Dynamics: The Case of Urea Decomposition. J Phys Chem B 2019; 123:6851-6856. [PMID: 31286763 DOI: 10.1021/acs.jpcb.9b05271] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Aqueous solutions provide a medium for many important reactions in chemical synthesis, industrial processes, environmental chemistry, and biological functions. It is an accepted fact that aqueous solvents can be direct participants in the reaction process and not act only as simple passive dielectrics. Assisting water molecules and proton wires are thus essential for the efficiency of many reactions. Here, we study the decomposition of urea into ammonia and isocyanic acid by means of enhanced ab initio molecular dynamics simulations. We highlight the role of the solvent molecules and their interactions with the reactants providing a proper description of the reaction mechanism and how the water hydrogen-bond network affects the reaction dynamics. Reaction free energy and rates have been calculated taking into account this important effect.
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Affiliation(s)
- Daniela Polino
- Department of Chemistry and Applied Biosciences , ETH Zurich , c/o USI Campus, Via Giuseppe Buffi 13 , CH-6900 Lugano , Switzerland.,Facoltà di Informatica, Istituto di Scienze Computazionali , Università della Svizzera Italiana , Via Giuseppe Buffi 13 , CH-6900 Lugano , Switzerland
| | - Michele Parrinello
- Department of Chemistry and Applied Biosciences , ETH Zurich , c/o USI Campus, Via Giuseppe Buffi 13 , CH-6900 Lugano , Switzerland.,Facoltà di Informatica, Istituto di Scienze Computazionali , Università della Svizzera Italiana , Via Giuseppe Buffi 13 , CH-6900 Lugano , Switzerland.,Istituto Italiano di Tecnologia , Via Morego 30 , 16163 Genova , Italy
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Nicolle A, Cagnina S, de Bruin T. First-principle based modeling of urea decomposition kinetics in aqueous solutions. Chem Phys Lett 2016. [DOI: 10.1016/j.cplett.2016.10.032] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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