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Liu Y, Wang H, Qu S, Li Y, Yang B, Zhao D. Theoretical calculation on excited state hydrogen bond kinetics of PRODAN derivative 2b molecule in methanol solution. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2021.139293] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Wang D, Bai T, Wang X, Xiong Y, Zhang Y, Shi Z, Zhang F, Lu W, Qing G. Sensing Mechanism of
Excited‐State
Intermolecular Hydrogen Bond for Phthalimide: Indispensable Role of Dimethyl Sulfoxide. CHINESE J CHEM 2021. [DOI: 10.1002/cjoc.202000604] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Dongdong Wang
- Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian Liaoning 116023 China
| | - Tianxin Bai
- Institute of Molecular Sciences and Engineering, Shandong University, Qingdao Shandong 266237 China
| | - Xue Wang
- Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian Liaoning 116023 China
| | - Yuting Xiong
- Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian Liaoning 116023 China
| | - Yahui Zhang
- Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian Liaoning 116023 China
| | - Zhenqiang Shi
- Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian Liaoning 116023 China
| | - Fusheng Zhang
- Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian Liaoning 116023 China
| | - Wenqi Lu
- Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian Liaoning 116023 China
| | - Guangyan Qing
- Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian Liaoning 116023 China
- College of Chemistry and Chemical Engineering, Wuhan Textile University 1 Sunshine Road Wuhan Hubei 430200 China
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Baral S, Phillips M, Yan H, Avenso J, Gundlach L, Baumeier B, Lyman E. Ultrafast Formation of the Charge Transfer State of Prodan Reveals Unique Aspects of the Chromophore Environment. J Phys Chem B 2020; 124:2643-2651. [PMID: 32160469 PMCID: PMC7587403 DOI: 10.1021/acs.jpcb.0c00121] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Lipophilic dyes such as laurdan and prodan are widely used in membrane biology due to a strong bathochromic shift in emission that reports the structural parameters of the membrane such as area per molecule. Disentangling of the factors which control the spectral shift is complicated by the stabilization of a charge-transfer-like excitation of the dye in polar environments. Predicting the emission therefore requires modeling both the relaxation of the environment and the corresponding evolution of the excited state. Here, an approach is presented in which (i) the local environment is sampled by a classical molecular dynamics (MD) simulation of the dye and solvent, (ii) the electronically excited state of prodan upon light absorption is predicted by numerical quantum mechanics (QM), (iii) the iterative relaxation of the environment around the excited dye by MD coupled with the evolution of the excited state is performed, and (iv) the emission properties are predicted by QM. The QM steps are computed using the many-body Green's function in the GW approximation and the Bethe-Salpeter equation with the environment modeled as fixed point charges, sampled in the MD simulation steps. The comparison to ultrafast time-resolved transient absorption measurements demonstrates that the iterative molecular mechanics (MM)/QM approach agrees quantitatively with both the polarity-dependent shift in emission and the time scale over which the charge transfer state is stabilized. Together the simulations and experimental measurements suggest that the evolution into the charge transfer state is slower in amphiphilic solvents.
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Affiliation(s)
- Swapnil Baral
- Department of Physics and Astronomy, University of Delaware, Newark, Delaware 19716, United States
| | - Matthew Phillips
- Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, United States
| | - Han Yan
- Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, United States
| | - Joseph Avenso
- Department of Physics and Astronomy, University of Delaware, Newark, Delaware 19716, United States
| | - Lars Gundlach
- Department of Physics and Astronomy, University of Delaware, Newark, Delaware 19716, United States
- Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, United States
| | - Björn Baumeier
- Department of Mathematics and Computer Science, Eindhoven University of Technology, P.O. Box 513, Eindhoven 5600 MB, The Netherlands
- Institute for Complex Molecular System, Eindhoven University of Technology, P.O. Box 513, Eindhoven 5600 MB, The Netherlands
| | - Edward Lyman
- Department of Physics and Astronomy, University of Delaware, Newark, Delaware 19716, United States
- Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, United States
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