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Cheriet M, Djemil R, Khellaf A, Khatmi D. Dopamine Family Complexes With β-Cyclodextrin: Molecular Docking Studies. Polycycl Aromat Compd 2021. [DOI: 10.1080/10406638.2021.1970588] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Mouna Cheriet
- Unité de recherche sur les plantes médicinales (URPM.3000,Laghouat) rattachée au centre de recherche en biotechnologie (CRBt 2500,Constantine), Constantine, Algérie
| | - Rayenne Djemil
- Laboratory of Computational Chemistry and Nanomaterials (LCCN), Guelma, Algeria
| | - Ammar Khellaf
- École Nationale Polytechnique de Constantine, Laboratoire des Mathématiques Appliquées et Modélisation, Guelma, Algérie
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Piya AA, Shamim SUD, Uddin MN, Munny K, Alam A, Hossain MK, Ahmed F. Adsorption behavior of cisplatin anticancer drug on the pristine, Al- and Ga-doped BN nanosheets: A comparative DFT study. COMPUT THEOR CHEM 2021. [DOI: 10.1016/j.comptc.2021.113241] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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3
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Prema D, Thamaraiselvi S, Yamuna R. Encapsulation of N-phenyl p-phenylenediamine into β-CD: Spectral, molecular modelling studies and sensor application for detecting Fe2+ ion. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.113990] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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4
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Investigation of 3D Contour Map and Intermolecular Interaction of Dopamine with β-Cyclodextrin and 2-Hydroxypropyl-β-cyclodextrin. J SOLUTION CHEM 2018. [DOI: 10.1007/s10953-018-0728-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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5
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Terekhova IV, Chislov MV, Brusnikina MA, Chibunova ES, Volkova TV, Zvereva IA, Proshin AN. Thermodynamics and binding mode of novel structurally related 1,2,4-thiadiazole derivatives with native and modified cyclodextrins. Chem Phys Lett 2017. [DOI: 10.1016/j.cplett.2017.01.010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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6
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Host-guest complex of nabumetone: β-cyclodextrin: quantum chemical study and QTAIM analysis. J INCL PHENOM MACRO 2017. [DOI: 10.1007/s10847-016-0690-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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7
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Molecular dynamics and quantum mechanics study of the [2-oxo-N-phenyl-3-oxazolidinesulfonamide@β-cyclodextrin] complex. J Mol Liq 2016. [DOI: 10.1016/j.molliq.2016.07.121] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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8
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Zaboub A, Madi F, Merdes R, Mohamedi M, Nouar L. A combined DFT and experimental study of proline/β-cyclodextrin inclusion complex. J Mol Liq 2016. [DOI: 10.1016/j.molliq.2016.01.082] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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9
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Djemil R, Attoui-Yahia O, Khatmi D. DFT-ONIOM study of the dopamine–β-CD complex: NBO and AIM analysis. CAN J CHEM 2015. [DOI: 10.1139/cjc-2014-0481] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
In this work, we conducted a systematic search of the minimum energy of a dopamine–β-cyclodextrin complex via different ONIOM approaches using both mixed (DFT-HF) and nonmixed (DFT-DFT) combinations. Different density functionals were employed: B3LYP, MPW1PW91, M05-2X, M06-2X, and ωB97X-D. Two different basis sets were used on the dopamine–β-cyclodextrin complex; a lower basis set (3-21G*) is used on β-cyclodextrin and a higher basis set (6-31G(d)) is used on dopamine. To fulfill this task, complexation and deformation energies were determined. The relative performance of these functionals was compared with that obtained with the DFT method at the M06-2X/6-31G(d) level that is chosen as a reference method. Although we did not clearly establish an assessment of the relative performance of these density functionals, the efficacy of the ONIOM combination (DFT-HF) is shown compared with a nonmixed ONIOM combination (DFT-DFT). The intermolecular hydrogen bond interactions of the complex obtained with the full M06-2X/6-31G(d) have been analyzed with the atoms-in-molecules and natural bond rrbital methodologies.
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Affiliation(s)
- Rayenne Djemil
- Laboratory of Computational Chemistry and Nanostructures, BP: 401, University of Guelma, Algeria
| | - Ouassila Attoui-Yahia
- Applied Organic Chemistry Laboratory, Department of Chemistry, Faculty of Science, Badji-Mokhtar University, BP 12 Annaba, Algeria
| | - Djameleddine Khatmi
- Laboratory of Computational Chemistry and Nanostructures, BP: 401, University of Guelma, Algeria
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Yao Q, You B, Zhou S, Chen M, Wang Y, Li W. Inclusion complexes of cypermethrin and permethrin with monochlorotriazinyl-beta-cyclodextrin: a combined spectroscopy, TG/DSC and DFT study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 117:576-586. [PMID: 24103228 DOI: 10.1016/j.saa.2013.09.036] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2013] [Revised: 09/04/2013] [Accepted: 09/07/2013] [Indexed: 06/02/2023]
Abstract
The suitable size hydrophobic cavity and monochlorotriazinyl group as a reactive anchor make MCT-β-CD to be widely used in fabric finishing. In this paper, the inclusion complexes of monochlorotriazinyl-beta-cyclodextrin (MCT-β-CD) with cypermethrin (CYPERM) and permethrin (PERM) are synthesized and analyzed by TG/DSC, FT-IR and Raman spectroscopy. TG/DSC reveals that the decomposed temperatures of inclusion complexes are lower by 25-30 °C than that of physical mixtures. DFT calculations in conjunction with FT-IR and Raman spectral analyses are used to study the structures of MCT-β-CD and their inclusion complexes. Four isomers of trisubstituted MCT-β-CD are designed and DFT calculations reveal that 1,3,5-trisubstituted MCT-β-CD has the lowest energy and can be considered as main component of MCT-β-CD. The ground-state geometries, vibrational wavenumbers, IR and Raman intensities of MCT-β-CD and their inclusion complexes were calculated at B3LYP/6-31G (d) level of theory. Upon examining the optimized geometry of inclusion complex, we find that the CYPERM and PERM are inserted into the toroid of MCT-β-CD from the larger opening. The band at 1646 cm(-1) in IR and at 1668 cm(-1) in Raman spectrum reveals that monochloroazinyl group of MCT-β-CD exists in ketone form but not in anion form. The noticeable IR and Raman shift of phenyl reveals that these two benzene rings of CYPERM and PERM stays inside the cavity of MCT-β-CD and has weak interaction with MCT-β-CD. This spectroscopy conclusion is consistent with theoretical predicted structure.
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Affiliation(s)
- Qi Yao
- School of Chemistry and Chemical engineering, Wuhan Textile University, 430073 Wuhan, China
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11
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Spillane W, Malaubier JB. Sulfamic Acid and Its N- and O-Substituted Derivatives. Chem Rev 2013; 114:2507-86. [DOI: 10.1021/cr400230c] [Citation(s) in RCA: 85] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- William Spillane
- School
of Chemistry, National University of Ireland, Galway, University Road, Galway, Ireland
| | - Jean-Baptiste Malaubier
- Manufacturing Science
and
Technology, Roche Ireland Limited, Clarecastle, Co. Clare, Ireland
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12
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Car Ž, Kodrin I, Požar J, Ribić R, Kovačević D, Peroković VP. Experimental and computational study of the complexation of adamantyl glycosides with β-cyclodextrin. Tetrahedron 2013. [DOI: 10.1016/j.tet.2013.06.097] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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13
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Bensouilah N, Abdaoui M. Inclusion complex of N-nitroso, N-(2-chloroethyl), N′, N′-dibenzylsulfamid with β-Cyclodextrin: Fluorescence and molecular modeling. CR CHIM 2012. [DOI: 10.1016/j.crci.2012.09.004] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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14
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Fatiha M, Leila L, Leila N, Eddine KD. Theoretical study of the inclusion processes of ethyl p-hydroxybenzoate with β-cyclodextrin: PM3MM and ONIOM2 calculations. J Taiwan Inst Chem Eng 2012. [DOI: 10.1016/j.jtice.2012.07.004] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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15
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Shi JH, Su YH, Jiang W. Enantioseparation and Chiral Recognition of -Cyclohexylmandelic Acid and Methyl -Cyclohexylmandelate on Hydroxypropyl- -Cyclodextrin as Chiral Selector: HPLC and Molecular Modeling. J Chromatogr Sci 2012; 51:8-16. [DOI: 10.1093/chromsci/bms097] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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17
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Li Z, Couzijn EPA, Zhang X. Intrinsic Properties of α-Cyclodextrin Complexes with Benzoate Derivatives in the Gas Phase: An Experimental and Theoretical Study. J Phys Chem B 2012; 116:943-50. [DOI: 10.1021/jp210329a] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Zhongshu Li
- Laboratorium für Organische Chemie, ETH Zürich, Wolfgang-Pauli-Strasse 10, CH-8093, Switzerland
| | - Erik P. A. Couzijn
- Laboratorium für Organische Chemie, ETH Zürich, Wolfgang-Pauli-Strasse 10, CH-8093, Switzerland
| | - Xiangyang Zhang
- Laboratorium für Organische Chemie, ETH Zürich, Wolfgang-Pauli-Strasse 10, CH-8093, Switzerland
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Xia Y, Wang X, Zhang Y, Luo B. Theoretical Study on Interactions of β-cyclodextrin with Trans-dichloro(dipyridine) platinum(II). COMPUT THEOR CHEM 2011. [DOI: 10.1016/j.comptc.2011.03.010] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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19
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Shi JH, Ding ZJ, Hu Y. Experimental and Theoretical Studies on the Enantioseparation and Chiral Recognition of Mandelate and Cyclohexylmandelate on Permethylated β-Cyclodextrin Chiral Stationary Phase. Chromatographia 2011. [DOI: 10.1007/s10337-011-2069-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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20
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Theoretical study on chiral recognition mechanism of methyl mandelate enantiomers on permethylated β-cyclodextrin. J Mol Model 2011; 18:803-13. [DOI: 10.1007/s00894-011-1118-0] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2011] [Accepted: 05/04/2011] [Indexed: 10/18/2022]
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21
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Host–guest complex of cypermethrin with β-cyclodextrin: A spectroscopy and theoretical investigation. J Mol Struct 2011. [DOI: 10.1016/j.molstruc.2011.01.053] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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22
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Fatiha M, Khatmi D, Largate L. Theoretical approach in the study of the inclusion processes of sulconazole with β-cyclodextrin. J Mol Liq 2010. [DOI: 10.1016/j.molliq.2010.03.004] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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