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Olejarczyk E, Cukic M, Porcaro C, Zappasodi F, Tecchio F. Clinical Sensitivity of Fractal Neurodynamics. Adv Neurobiol 2024; 36:285-312. [PMID: 38468039 DOI: 10.1007/978-3-031-47606-8_15] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/13/2024]
Abstract
Among the significant advances in the understanding of the organization of the neuronal networks that coordinate the body and brain, their complex nature is increasingly important, resulting from the interaction between the very large number of constituents strongly organized hierarchically and at the same time with "self-emerging." This awareness drives us to identify the measures that best quantify the "complexity" that accompanies the continuous evolutionary dynamics of the brain. In this chapter, after an introductory section (Sect. 15.1), we examine how the Higuchi fractal dimension is able to perceive physiological processes (15.2), neurological (15.3) and psychiatric (15.4) disorders, and neuromodulation effects (15.5), giving a mention of other methods of measuring neuronal electrical activity in addition to electroencephalography, such as magnetoencephalography and functional magnetic resonance. Conscious that further progress will support a deeper understanding of the temporal course of neuronal activity because of continuous interaction with the environment, we conclude confident that the fractal dimension has begun to uncover important features of the physiology of brain activity and its alterations.
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Affiliation(s)
- Elzbieta Olejarczyk
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Warsaw, Poland.
| | - Milena Cukic
- Department of Biomimetic Membranes and Textiles, EMPA Material Science and Technology, St. Gallen, Switzerland
| | - Camillo Porcaro
- Department of Neuroscience and Padova Neuroscience Center (PNC), University of Padova, Padova, Italy
| | - Filippo Zappasodi
- Department of Neuroscienze, Imaging and Clinical Sciences, Gabriele D'annunzio University, Chieti, Italy
| | - Franca Tecchio
- Institute of Cognitive Sciences and Technologies, Consiglio Nazionale delle Ricerche (CNR), Rome, Italy
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Zurdo-Tabernero M, Canal-Alonso Á, de la Prieta F, Rodríguez S, Prieto J, Corchado JM. An overview of machine learning and deep learning techniques for predicting epileptic seizures. J Integr Bioinform 2023; 20:jib-2023-0002. [PMID: 38099461 PMCID: PMC10777364 DOI: 10.1515/jib-2023-0002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Accepted: 08/01/2023] [Indexed: 01/11/2024] Open
Abstract
Epilepsy is a neurological disorder (the third most common, following stroke and migraines). A key aspect of its diagnosis is the presence of seizures that occur without a known cause and the potential for new seizures to occur. Machine learning has shown potential as a cost-effective alternative for rapid diagnosis. In this study, we review the current state of machine learning in the detection and prediction of epileptic seizures. The objective of this study is to portray the existing machine learning methods for seizure prediction. Internet bibliographical searches were conducted to identify relevant literature on the topic. Through cross-referencing from key articles, additional references were obtained to provide a comprehensive overview of the techniques. As the aim of this paper aims is not a pure bibliographical review of the subject, the publications here cited have been selected among many others based on their number of citations. To implement accurate diagnostic and treatment tools, it is necessary to achieve a balance between prediction time, sensitivity, and specificity. This balance can be achieved using deep learning algorithms. The best performance and results are often achieved by combining multiple techniques and features, but this approach can also increase computational requirements.
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Affiliation(s)
| | | | | | - Sara Rodríguez
- BISITE Research Group, University of Salamanca, Salamanca, Spain
| | - Javier Prieto
- BISITE Research Group, University of Salamanca, Salamanca, Spain
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3
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Gong Y, Xu C, Wang S, Wang Y, Chen Z. Computerized application for epilepsy in China: Does the era of artificial intelligence comes? Acta Neurol Scand 2022; 146:732-742. [PMID: 36156212 DOI: 10.1111/ane.13711] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2022] [Revised: 09/05/2022] [Accepted: 09/09/2022] [Indexed: 12/01/2022]
Abstract
Epilepsy, one of the most common neurological diseases in China, is notorious for its spontaneous, unprovoked and recurrent seizures. The etiology of epilepsy varies among individual patients, including congenital gene mutation, traumatic injury, infections, etc. This heterogeneity partly hampered the accurate diagnosis and choice of appropriate treatments. Encouragingly, great achievements have been achieved in computational science, making it become a key player in medical fields gradually and bringing new hope for rapid and accurate diagnosis as well as targeted therapies in epilepsy. Here, we historically review the advances of computerized applications in epilepsy-especially those tremendous findings achieved in China-for different purposes including seizure prediction, localization of epileptogenic zone, post-surgical prognosis, etc. Special attentions are paid to the great progress based on artificial intelligence (AI), which is more "sensitive", "smart" and "in-depth" than human capacities. At last, we give a comprehensive discussion about the disadvantages and limitations of current computerized applications for epilepsy and propose some future directions as further stepping stones to embrace "the era of AI" in epilepsy.
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Affiliation(s)
- Yiwei Gong
- Key Laboratory of Neuropharmacology and Translational Medicine of Zhejiang Province, School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, China
| | - Cenglin Xu
- Key Laboratory of Neuropharmacology and Translational Medicine of Zhejiang Province, School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, China
| | - Shuang Wang
- Epilepsy Center, Department of Neurology, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China
| | - Yi Wang
- Key Laboratory of Neuropharmacology and Translational Medicine of Zhejiang Province, School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, China
| | - Zhong Chen
- Key Laboratory of Neuropharmacology and Translational Medicine of Zhejiang Province, School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, China
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Mirchi N, Warsi NM, Zhang F, Wong SM, Suresh H, Mithani K, Erdman L, Ibrahim GM. Decoding Intracranial EEG With Machine Learning: A Systematic Review. Front Hum Neurosci 2022; 16:913777. [PMID: 35832872 PMCID: PMC9271576 DOI: 10.3389/fnhum.2022.913777] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Accepted: 05/31/2022] [Indexed: 11/13/2022] Open
Abstract
Advances in intracranial electroencephalography (iEEG) and neurophysiology have enabled the study of previously inaccessible brain regions with high fidelity temporal and spatial resolution. Studies of iEEG have revealed a rich neural code subserving healthy brain function and which fails in disease states. Machine learning (ML), a form of artificial intelligence, is a modern tool that may be able to better decode complex neural signals and enhance interpretation of these data. To date, a number of publications have applied ML to iEEG, but clinician awareness of these techniques and their relevance to neurosurgery, has been limited. The present work presents a review of existing applications of ML techniques in iEEG data, discusses the relative merits and limitations of the various approaches, and examines potential avenues for clinical translation in neurosurgery. One-hundred-seven articles examining artificial intelligence applications to iEEG were identified from 3 databases. Clinical applications of ML from these articles were categorized into 4 domains: i) seizure analysis, ii) motor tasks, iii) cognitive assessment, and iv) sleep staging. The review revealed that supervised algorithms were most commonly used across studies and often leveraged publicly available timeseries datasets. We conclude with recommendations for future work and potential clinical applications.
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Affiliation(s)
- Nykan Mirchi
- Faculty of Medicine, University of Toronto, Toronto, ON, Canada
| | - Nebras M. Warsi
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, ON, Canada
- Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada
| | - Frederick Zhang
- Faculty of Medicine, University of Ottawa, Ottawa, ON, Canada
| | - Simeon M. Wong
- Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada
- Program in Neuroscience and Mental Health, Hospital for Sick Children Research Institute, Toronto, ON, Canada
| | - Hrishikesh Suresh
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, ON, Canada
| | - Karim Mithani
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, ON, Canada
- Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada
| | - Lauren Erdman
- Vector Institute for Artificial Intelligence, MaRS Centre, Toronto, ON, Canada
- Department of Computer Science, University of Toronto, Toronto, ON, Canada
- Hospital for Sick Children, Toronto, ON, Canada
| | - George M. Ibrahim
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, ON, Canada
- Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada
- Program in Neuroscience and Mental Health, Hospital for Sick Children Research Institute, Toronto, ON, Canada
- Institute of Medical Science, University of Toronto, Toronto, ON, Canada
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Abstract
To identify precursors of epileptic seizures, an EEG characteristic analysis is carried out based on a roughness-length method, where fractal dimensions and intercept values are extracted to measure the structure complexity and the amplitude roughness of EEG signals in different phases. Using the significant changes of the fractal dimension and intercept in the preictal phase with respect to those in the interictal phase, a patient-specific seizure prediction algorithm is then proposed by combining with a gradient boosting classifier. The probabilistic outputs of the trained gradient boosting classifier are further processed by threshold comparison and rule-based judgment to distinguish preictal EEG from interictal EEG and to generate seizure alerts. The prediction algorithm was evaluated on 20 patients’ intracranial EEG recordings from the Freiburg EEG database, which contains the preictal periods of 65 seizures and 499[Formula: see text]h interictal EEG. Setting the seizure prediction horizon as 2[Formula: see text]min, averaged sensitivity values of 90.42% and 91.67% with averaged false prediction rates of 0.12/h and 0.10/h were achieved for seizure occurrence periods of 30 and 50[Formula: see text]min, respectively. These results demonstrate the ability of fractal dimension and intercept metrics in predicting the occurrence of seizures.
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Affiliation(s)
- Yanli Zhang
- School of Information and Electronic Engineering, Shandong Technology and Business University, 191 Binhai Middle Road, Yantai 264005, P. R. China
| | - Rendi Yang
- School of Electromechanical and Automotive Engineering, Yantai University, Yantai 264005, P. R. China
| | - Weidong Zhou
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
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Abstract
Epileptic seizures are known for their unpredictable nature. However, recent research provides that the transition to seizure event is not random but the result of evidence accumulations. Therefore, a reliable method capable to detect these indications can predict seizures and improve the life quality of epileptic patients. Seizures periods are generally characterized by epileptiform discharges with different changes including spike rate variation according to the shapes, spikes, and the amplitude. In this study, spike rate is used as the indicator to anticipate seizures in electroencephalogram (EEG) signal. Spikes detection step is used in EEG signal during interictal, preictal, and ictal periods followed by a mean filter to smooth the spike number. The maximum spike rate in interictal periods is used as an indicator to predict seizures. When the spike number in the preictal period exceeds the threshold, an alarm is triggered. Using the CHB-MIT database, the proposed approach has ensured 92% accuracy in seizure prediction for all patients.
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Affiliation(s)
- Itaf Ben Slimen
- Centre de Recherche et de Production Research Lab., Ecole Nationale Supérieure des Ingénieurs de Tunis, University of Tunis, Tunis 1008, Tunisia
| | - Larbi Boubchir
- Laboratoire d'Informatique Avancée de Saint-Denis Research Lab., University of Paris 8, Saint-Denis, Cedex 93526, France
| | - Hassene Seddik
- Centre de Recherche et de Production Research Lab., Ecole Nationale Supérieure des Ingénieurs de Tunis, University of Tunis, Tunis 1008, Tunisia
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Shokouh Alaei H, Khalilzadeh MA, Gorji A. Optimal selection of SOP and SPH using fuzzy inference system for on-line epileptic seizure prediction based on EEG phase synchronization. Australas Phys Eng Sci Med 2019; 42:1049-68. [DOI: 10.1007/s13246-019-00806-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2019] [Accepted: 09/30/2019] [Indexed: 12/25/2022]
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Sadeghzadeh H, Hosseini-Nejad H, Salehi S. Real-time epileptic seizure prediction based on online monitoring of pre-ictal features. Med Biol Eng Comput 2019; 57:2461-9. [PMID: 31478133 DOI: 10.1007/s11517-019-02039-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2018] [Accepted: 08/21/2019] [Indexed: 10/26/2022]
Abstract
Reliable prediction of epileptic seizures is of prime importance as it can drastically change the quality of life for patients. This study aims to propose a real-time low computational approach for the prediction of epileptic seizures and to present an efficient hardware implementation of this approach for portable prediction systems. Three levels of feature extraction are performed to characterize the pre-ictal activities of the EEG signal. In the first-level, the line length algorithm is applied to the pre-ictal region. The features obtained in the first-level are mathematically integrated to extract the second-level features and then the line lengths of the second-level features are calculated to obtain our third-level feature. The third-level information is compared with predefined threshold levels to make a decision on whether the extracted characteristics are relevant to a seizure occurrence or not. The validity of this algorithm was tested by EEG recordings in the CHB-MIT database (97 seizures, 834.224 h) for 19 epileptic patients. The results showed that the average sensitivity was 90.62%, the specificity was 88.34%, the accuracy was 88.76% with the average false prediction rate as low as 0.0046 h-1, and the average prediction time was 23.3 min. The low computational complexity is the superiority of the proposed approach, which provides a technologically simple but accurate way of predicting epileptic seizures and enables hardware implantable devices. Graphical abstract Proposed seizure prediction algorithm and its features.
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Hejazi M, Motie Nasrabadi A. Prediction of epilepsy seizure from multi-channel electroencephalogram by effective connectivity analysis using Granger causality and directed transfer function methods. Cogn Neurodyn 2019; 13:461-473. [PMID: 31565091 DOI: 10.1007/s11571-019-09534-z] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2018] [Revised: 02/07/2019] [Accepted: 04/25/2019] [Indexed: 01/09/2023] Open
Abstract
Epilepsy is a chronic disorder, which causes strange perceptions, muscle spasms, sometimes seizures, and loss of awareness, associated with abnormal neuronal activity in the brain. The goal of this study is to investigate how effective connectivity (EC) changes effect on unexpected seizures prediction, as this will authorize the patients to play it safe and avoid risk. We approve the hypothesis that EC variables near seizure change significantly so seizure can be predicted in accordance with this variation. We introduce two time-variant coefficients based on standard deviation of EC on Freiburg EEG dataset by using directed transfer function and Granger causality methods and compare index changes over the course of time in five different frequency bands. Comparison of the multivariate and bivariate analysis of factors is implemented in this investigation. The performance based on the suggested methods shows the seizure occurrence period is approximately 50 min that is expected onset stated in, the maximum value of sensitivity approaching ~ 80%, and 0.33 FP/h is the false prediction rate. The findings revealed that greater accuracy and sensitivity are obtained by the designed system in comparison with the results of other works in the same condition. Even though these results still are not sufficient for clinical applications. Based on the conclusions, it can generally be observed that the greater results by DTF method are in the gamma and beta frequency bands.
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Affiliation(s)
- Mona Hejazi
- 1Department of Biomedical Engineering, Islamic Azad University, Science and Research Branch, Tehran, Iran
| | - Ali Motie Nasrabadi
- 2Department of Biomedical Engineering, Faculty of Biomedical Engineering, Shahed University, Tehran, Iran
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Jang HJ, Cho KO. Dual deep neural network-based classifiers to detect experimental seizures. Korean J Physiol Pharmacol 2019; 23:131-139. [PMID: 30820157 PMCID: PMC6384195 DOI: 10.4196/kjpp.2019.23.2.131] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/02/2018] [Accepted: 01/09/2019] [Indexed: 12/23/2022]
Abstract
Manually reviewing electroencephalograms (EEGs) is labor-intensive and demands automated seizure detection systems. To construct an efficient and robust event detector for experimental seizures from continuous EEG monitoring, we combined spectral analysis and deep neural networks. A deep neural network was trained to discriminate periodograms of 5-sec EEG segments from annotated convulsive seizures and the pre- and post-EEG segments. To use the entire EEG for training, a second network was trained with non-seizure EEGs that were misclassified as seizures by the first network. By sequentially applying the dual deep neural networks and simple pre- and post-processing, our autodetector identified all seizure events in 4,272 h of test EEG traces, with only 6 false positive events, corresponding to 100% sensitivity and 98% positive predictive value. Moreover, with pre-processing to reduce the computational burden, scanning and classifying 8,977 h of training and test EEG datasets took only 2.28 h with a personal computer. These results demonstrate that combining a basic feature extractor with dual deep neural networks and rule-based pre- and post-processing can detect convulsive seizures with great accuracy and low computational burden, highlighting the feasibility of our automated seizure detection algorithm.
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Affiliation(s)
- Hyun-Jong Jang
- Department of Physiology, College of Medicine, The Catholic University of Korea, Seoul 06591, Korea.,Department of Biomedicine & Health Sciences, The Catholic University of Korea, Seoul 06591, Korea.,Catholic Neuroscience Institute, The Catholic University of Korea, Seoul 06591, Korea
| | - Kyung-Ok Cho
- Department of Biomedicine & Health Sciences, The Catholic University of Korea, Seoul 06591, Korea.,Catholic Neuroscience Institute, The Catholic University of Korea, Seoul 06591, Korea.,Institute of Aging and Metabolic Diseases, The Catholic University of Korea, Seoul 06591, Korea.,Department of Pharmacology, College of Medicine, The Catholic University of Korea, Seoul 06591, Korea
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Abstract
In the past two decades, significant advances have been made on automated electroencephalogram (EEG)-based diagnosis of epilepsy and seizure detection. A number of innovative algorithms have been introduced that can aid in epilepsy diagnosis with a high degree of accuracy. In recent years, the frontiers of computational epilepsy research have moved to seizure prediction, a more challenging problem. While antiepileptic medication can result in complete seizure freedom in many patients with epilepsy, up to one-third of patients living with epilepsy will have medically intractable epilepsy, where medications reduce seizure frequency but do not completely control seizures. If a seizure can be predicted prior to its clinical manifestation, then there is potential for abortive treatment to be given, either self-administered or via an implanted device administering medication or electrical stimulation. This will have a far-reaching impact on the treatment of epilepsy and patient's quality of life. This paper presents a state-of-the-art review of recent efforts and journal articles on seizure prediction. The technologies developed for epilepsy diagnosis and seizure detection are being adapted and extended for seizure prediction. The paper ends with some novel ideas for seizure prediction using the increasingly ubiquitous machine learning technology, particularly deep neural network machine learning.
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Affiliation(s)
- U Rajendra Acharya
- Department of Electronics and Computer Engineering, Ngee Ann Polytechnic, Singapore; Department of Biomedical Engineering, School of Science and Technology, Singapore University of Social Sciences, Singapore; Department of Biomedical Engineering, Faculty of Engineering, University of Malaya, Malaysia
| | - Yuki Hagiwara
- Department of Electronics and Computer Engineering, Ngee Ann Polytechnic, Singapore
| | - Hojjat Adeli
- Department of Neuroscience, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH, United States; Department of Neurology, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH, United States; Department of Biomedical Informatics, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH, United States.
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Ceballos-Villegas ME, Saldaña Mena JJ, Gutierrez Lozano AL, Sepúlveda-Cañamar FJ, Huidobro N, Manjarrez E, Lomeli J. The Complexity of H-wave Amplitude Fluctuations and Their Bilateral Cross-Covariance Are Modified According to the Previous Fitness History of Young Subjects under Track Training. Front Hum Neurosci 2017; 11:530. [PMID: 29163107 PMCID: PMC5671983 DOI: 10.3389/fnhum.2017.00530] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2017] [Accepted: 10/18/2017] [Indexed: 12/28/2022] Open
Abstract
The Hoffmann reflex (H-wave) is produced by alpha-motoneuron activation in the spinal cord. A feature of this electromyography response is that it exhibits fluctuations in amplitude even during repetitive stimulation with the same intensity of current. We herein explore the hypothesis that physical training induces plastic changes in the motor system. Such changes are evaluated with the fractal dimension (FD) analysis of the H-wave amplitude-fluctuations (H-wave FD) and the cross-covariance (CCV) between the bilateral H-wave amplitudes. The aim of this study was to compare the H-wave FD as well as the CCV before and after track training in sedentary individuals and athletes. The training modality in all subjects consisted of running three times per week (for 13 weeks) in a concrete road of 5 km. Given the different physical condition of sedentary vs. athletes, the running time between sedentary and athletes was different. After training, the FD was significantly increased in sedentary individuals but significantly reduced in athletes, although there were no changes in spinal excitability in either group of subjects. Moreover, the CCV between bilateral H-waves exhibited a significant increase in athletes but not in sedentary individuals. These differential changes in the FD and CCV indicate that the plastic changes in the complexity of the H-wave amplitude fluctuations as well as the synaptic inputs to the Ia-motoneuron systems of both legs were correlated to the previous fitness history of the subjects. Furthermore, these findings demonstrate that the FD and CCV can be employed as indexes to study plastic changes in the human motor system.
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Affiliation(s)
- Maria E Ceballos-Villegas
- Sección de Posgrado e Investigación, Laboratorio de Neurofisiología Humana y Control Motor, Escuela Superior de Medicina, Instituto Politécnico Nacional, Mexico City, Mexico
| | - Juan J Saldaña Mena
- Escuela de Quiropráctica, Universidad Estatal del Valle de Ecatepec, Ecatepec de Morelos, Mexico
| | - Ana L Gutierrez Lozano
- Sección de Posgrado e Investigación, Laboratorio de Neurofisiología Humana y Control Motor, Escuela Superior de Medicina, Instituto Politécnico Nacional, Mexico City, Mexico
| | | | - Nayeli Huidobro
- Instituto de Fisiología, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - Elias Manjarrez
- Instituto de Fisiología, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico
| | - Joel Lomeli
- Sección de Posgrado e Investigación, Laboratorio de Neurofisiología Humana y Control Motor, Escuela Superior de Medicina, Instituto Politécnico Nacional, Mexico City, Mexico
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Kolarijani MAS, Amirsalari S, Haidari MR. Analysis of variations of correlation dimension and nonlinear interdependence for the prediction of pediatric myoclonic seizures – A preliminary study. Epilepsy Res 2017; 135:102-14. [DOI: 10.1016/j.eplepsyres.2017.06.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2016] [Revised: 05/20/2017] [Accepted: 06/16/2017] [Indexed: 01/23/2023]
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14
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Kesić S, Spasić SZ. Application of Higuchi's fractal dimension from basic to clinical neurophysiology: A review. Comput Methods Programs Biomed 2016; 133:55-70. [PMID: 27393800 DOI: 10.1016/j.cmpb.2016.05.014] [Citation(s) in RCA: 99] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2015] [Revised: 03/24/2016] [Accepted: 05/27/2016] [Indexed: 06/06/2023]
Abstract
BACKGROUND AND OBJECTIVE For more than 20 years, Higuchi's fractal dimension (HFD), as a nonlinear method, has occupied an important place in the analysis of biological signals. The use of HFD has evolved from EEG and single neuron activity analysis to the most recent application in automated assessments of different clinical conditions. Our objective is to provide an updated review of the HFD method applied in basic and clinical neurophysiological research. METHODS This article summarizes and critically reviews a broad literature and major findings concerning the applications of HFD for measuring the complexity of neuronal activity during different neurophysiological conditions. The source of information used in this review comes from the PubMed, Scopus, Google Scholar and IEEE Xplore Digital Library databases. RESULTS The review process substantiated the significance, advantages and shortcomings of HFD application within all key areas of basic and clinical neurophysiology. Therefore, the paper discusses HFD application alone, combined with other linear or nonlinear measures, or as a part of automated methods for analyzing neurophysiological signals. CONCLUSIONS The speed, accuracy and cost of applying the HFD method for research and medical diagnosis make it stand out from the widely used linear methods. However, only a combination of HFD with other nonlinear methods ensures reliable and accurate analysis of a wide range of neurophysiological signals.
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Affiliation(s)
- Srdjan Kesić
- University of Belgrade, Institute for Biological Research "Siniša Stanković", Department of Neurophysiology, Bulevar Despota Stefana 142, 11060 Belgrade, Serbia
| | - Sladjana Z Spasić
- University of Belgrade, Institute for Multidisciplinary Research, Department of Life Sciences, Kneza Višeslava 1, 11030 Belgrade, Serbia; Singidunum University, Danijelova 32, 11010 Belgrade, Serbia.
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Behnam M, Pourghassem H. Real-time seizure prediction using RLS filtering and interpolated histogram feature based on hybrid optimization algorithm of Bayesian classifier and Hunting search. Comput Methods Programs Biomed 2016; 132:115-136. [PMID: 27282233 DOI: 10.1016/j.cmpb.2016.04.014] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2015] [Revised: 04/07/2016] [Accepted: 04/08/2016] [Indexed: 06/06/2023]
Abstract
BACKGROUND AND OBJECTIVES Epileptic seizure prediction using EEG signal analysis is an important application for drug therapy and pediatric patient monitoring. Time series estimation to obtain the future samples of EEG signal has vital role for detecting seizure attack. In this paper, a novel density-based real-time seizure prediction algorithm based on a trained offline seizure detection algorithm is proposed. METHODS In the offline seizure detection procedure, after signal preprocessing, histogram-based statistical features are extracted from signal probability distribution. By defining a deterministic polynomial model on the normalized histogram, a novel syntactic feature that is named Interpolated Histogram Feature (IHF) is proposed. Moreover, with this feature, Seizure Distribution Model (SDM) as a descriptor of the seizure and non-seizure signals is presented. By using a novel hybrid optimization algorithm based on Bayesian classifier and Hunting Search (HuS) algorithm, the optimal features are selected. To detect the seizure attacks in the online mode, a Multi-Layer Perceptron (MLP) classifier is trained with the optimal features in the offline procedure. For online prediction, the enhanced Recursive Least Square (RLS) filter is applied to estimate sample-by-sample of the EEG signal. Also, a density-based signal tracking scenario is introduced to update and tune the parameters of RLS filtering algorithm. RESULTS Our prediction algorithm is evaluated on 104 hours of EEG signals recorded from 23 pediatric patients. Our online signal prediction algorithm provides the accuracy rate of 86.56% and precision rate of 86.53% simultaneously using the trained MLP classifier from the offline mode. The recall rate of seizure prediction is 97.27% and the false prediction rate of 0.00215 per hour is achieved as well. Ultimately, the future samples of EEG signal are estimated, and the time of seizure signal prediction is also converged to 6.64 seconds. CONCLUSION In our proposed real-time algorithm, by implementing a density-based signal tracking scenario, the future samples of signal with suitable time is predicted and the seizure is detected based on the optimal features from the IHF and histogram-based statistical features with acceptable performance.
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Affiliation(s)
- Morteza Behnam
- Department of Electrical Engineering, Najafabad Branch, Islamic Azad University, Najafabad, Isfahan, Iran
| | - Hossein Pourghassem
- Department of Electrical Engineering, Najafabad Branch, Islamic Azad University, Najafabad, Isfahan, Iran.
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Abstract
Automatic seizure detection technology is of great significance for long-term electroencephalogram (EEG) monitoring of epilepsy patients. The aim of this work is to develop a seizure detection system with high accuracy. The proposed system was mainly based on multifractal analysis, which describes the local singular behavior of fractal objects and characterizes the multifractal structure using a continuous spectrum. Compared with computing the single fractal dimension, multifractal analysis can provide a better description on the transient behavior of EEG fractal time series during the evolvement from interictal stage to seizures. Thus both interictal EEG and ictal EEG were analyzed by multifractal formalism and their differences in the multifractal features were used to distinguish the two class of EEG and detect seizures. In the proposed detection system, eight features (α0, αmin, αmax, Δα, f(α min ), f(α max ), Δf and R) were extracted from the multifractal spectrums of the preprocessed EEG to construct feature vectors. Subsequently, relevance vector machine (RVM) was applied for EEG patterns classification, and a series of post-processing operations were used to increase the accuracy and reduce false detections. Both epoch-based and event-based evaluation methods were performed to appraise the system's performance on the EEG recordings of 21 patients in the Freiburg database. The epoch-based sensitivity of 92.94% and specificity of 97.47% were achieved, and the proposed system obtained a sensitivity of 92.06% with a false detection rate of 0.34/h in event-based performance assessment.
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Affiliation(s)
- Yanli Zhang
- School of Information Science and Engineering, Shandong University, Jinan 250100, P. R. China
- School of Information and Electronics Engineering, Shandong Institute of Business and Technology, Yantai 264005, P. R. China
| | - Weidong Zhou
- School of Information Science and Engineering, Shandong University, 27 Shanda Road, Jinan 250100, P. R. China
- Suzhou Institute of Shandong University, Suzhou 215123, P. R. China
| | - Shasha Yuan
- School of Information Science and Engineering, Shandong University, 27 Shanda Road, Jinan 250100, P. R. China
- Suzhou Institute of Shandong University, Suzhou 215123, P. R. China
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Zhang Y, Zhou W, Yuan S, Yuan Q. Seizure detection method based on fractal dimension and gradient boosting. Epilepsy Behav 2015; 43:30-8. [PMID: 25549952 DOI: 10.1016/j.yebeh.2014.11.025] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/26/2014] [Revised: 11/20/2014] [Accepted: 11/21/2014] [Indexed: 10/24/2022]
Abstract
Automatic seizure detection technology is necessary and crucial for the long-term electroencephalography (EEG) monitoring of patients with epilepsy. This article presents a patient-specific method for the detection of epileptic seizures. The fractal dimensions of preprocessed multichannel EEG were firstly estimated using a k-nearest neighbor algorithm. Then, the feature vector constructed for each epoch was fed into a trained gradient boosting classifier. After a series of postprocessing, including smoothing, threshold processing, collar operation, and union of seizure detections in a short time interval, a binary decision was made to determine whether the epoch belonged to seizure status or not. Both the epoch-based and event-based assessments were used for the performance evaluation of this method on the EEG data of 21 patients from the Freiburg dataset. An average epoch-based sensitivity of 91.01% and a specificity of 95.77% were achieved. For the event-based assessment, this method obtained an average sensitivity of 94.05%, with a false detection rate of 0.27/h.
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