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Zakharova AA, Efimova SS, Yuskovets VN, Yakovlev IP, Sarkisyan ZM, Ostroumova OS. 1,3-Thiazine, 1,2,3,4-Dithiadiazole, and Thiohydrazide Derivatives Affect Lipid Bilayer Properties and Ion-Permeable Pores Induced by Antifungals. Front Cell Dev Biol 2020; 8:535. [PMID: 32695784 PMCID: PMC7339130 DOI: 10.3389/fcell.2020.00535] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Accepted: 06/08/2020] [Indexed: 12/02/2022] Open
Abstract
Over the past decade, thiazines, thiadiazoles, and thiohydrazides have attracted increasing attention due to their sedative, antimicrobial, antiviral, antifungal, and antitumor activities. The clinical efficacy of such drugs, as well as the possibility of developing resistance to antimicrobials, will depend on addressing a number of fundamental problems, including the role of membrane lipids during their interaction with plasma membranes. The effects of the eight 1,3- thiazine-, 1,2,3,4- dithiadiazole-, and thiohydrazide-related compounds on the physical properties of model lipid membranes and the effects on reconstituted ion channels induced by the polyene macrolide antimycotic nystatin and antifungal cyclic lipopeptides syringomycin E and fengycin were observed. We found that among the tested agents, the fluorine-containing compound N′-(3,5-difluorophenyl)-benzenecarbothiohydrazide (C6) was the most effective at increasing the electric barrier for anion permeation into the hydrophobic region of the membrane and reducing the conductance of anion-permeable syringomycin pores. A decrease in the membrane boundary potential with C6 adsorption also facilitated the immersion of positively charged syringomycin molecules into the lipid bilayer and increases the pore-forming ability of the lipopeptide. Using differential scanning microcalorimetry, we showed that C6 led to disordering of membrane lipids, possibly by potentiating positive curvature stress. Therefore, we used C6 as an agonist of antifungals forming the pores that are sensitive to membrane curvature stress and lipid packing, i.e., nystatin and fengycin. The dramatic increase in transmembrane current induced by syringomycin E, nystatin, and fengycin upon C6 treatment suggests its potential in combination therapy for treating invasive fungal infections.
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Affiliation(s)
- Anastasiia A Zakharova
- Laboratory of Membrane and Ion Channel Modeling, Institute of Cytology, Russian Academy of Sciences, Saint Petersburg, Russia
| | - Svetlana S Efimova
- Laboratory of Membrane and Ion Channel Modeling, Institute of Cytology, Russian Academy of Sciences, Saint Petersburg, Russia
| | - Valeriy N Yuskovets
- Department of Organic Chemistry, Saint-Petersburg State Chemical Pharmaceutical University, Saint Petersburg, Russia
| | - Igor P Yakovlev
- Department of Organic Chemistry, Saint-Petersburg State Chemical Pharmaceutical University, Saint Petersburg, Russia
| | - Zara M Sarkisyan
- Department of General and Medical Chemistry, Saint-Petersburg State Pediatric Medical University, Saint Petersburg, Russia
| | - Olga S Ostroumova
- Laboratory of Membrane and Ion Channel Modeling, Institute of Cytology, Russian Academy of Sciences, Saint Petersburg, Russia
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Role of Lipid Composition, Physicochemical Interactions, and Membrane Mechanics in the Molecular Actions of Microbial Cyclic Lipopeptides. J Membr Biol 2019; 252:131-157. [PMID: 31098678 DOI: 10.1007/s00232-019-00067-4] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Accepted: 05/02/2019] [Indexed: 10/26/2022]
Abstract
Several experimental and theoretical studies have extensively investigated the effects of a large diversity of antimicrobial peptides (AMPs) on model lipid bilayers and living cells. Many of these peptides disturb cells by forming pores in the plasma membrane that eventually lead to the cell death. The complexity of these peptide-lipid interactions is mainly related to electrostatic, hydrophobic and topological issues of these counterparts. Diverse studies have shed some light on how AMPs act on lipid bilayers composed by different phospholipids, and how mechanical properties of membranes could affect the antimicrobial effects of such compounds. On the other hand, cyclic lipopeptides (cLPs), an important class of microbial secondary metabolites, have received comparatively less attention. Due to their amphipathic structures, cLPs exhibit interesting biological activities including interactions with biofilms, anti-bacterial, anti-fungal, antiviral, and anti-tumoral properties, which deserve more investigation. Understanding how physicochemical properties of lipid bilayers contribute and determining the antagonistic activity of these secondary metabolites over a broad spectrum of microbial pathogens could establish a framework to design and select effective strategies of biological control. This implies unravelling-at the biophysical level-the complex interactions established between cLPs and lipid bilayers. This review presents, in a systematic manner, the diversity of lipidated antibiotics produced by different microorganisms, with a critical analysis of the perturbing actions that have been reported in the literature for this specific set of membrane-active lipopeptides during their interactions with model membranes and in vivo. With an overview on the mechanical properties of lipid bilayers that can be experimentally determined, we also discuss which parameters are relevant in the understanding of those perturbation effects. Finally, we expose in brief, how this knowledge can help to design novel strategies to use these biosurfactants in the agronomic and pharmaceutical industries.
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Efimova SS, Zakharova AA, Ismagilov AA, Schagina LV, Malev VV, Bashkirov PV, Ostroumova OS. Lipid-mediated regulation of pore-forming activity of syringomycin E by thyroid hormones and xanthene dyes. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2017; 1860:691-699. [PMID: 29253504 DOI: 10.1016/j.bbamem.2017.12.010] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2017] [Revised: 11/21/2017] [Accepted: 12/13/2017] [Indexed: 10/18/2022]
Abstract
The effects of dipole modifiers, thyroid hormones (thyroxine and triiodothyronine) and xanthene dyes (Rose Bengal, phloxineB, erythrosin, eosinY and fluorescein) on the pore-forming activity of the lipopeptide syringomycin E (SRE) produced by Pseudomonas syringae were studied in a model bilayer. Thyroxine does not noticeably influence the steady-state number of open SRE channels (Nop), whereas triiodothyronine decreases it 10-fold at -50mV. Rose Bengal, phloxine B and erythrosin significantly increase Nop by 350, 100 and 70 times, respectively. Eosin Y and fluorescein do not practically affect the pore-forming activity of SRE. Recently, we showed that hormones decrease the dipole potential of lipid bilayers by approximately 60mV at 50μM, while Rose Bengal, phloxine B and erythrosin at 2.5μM reduce the membrane dipole potential by 120, 80 and 50mV, respectively. In the present study using differential scanning microcalorimetry, confocal fluorescence microscopy, the calcein release technique and measurements of membrane curvature elasticity, we show that triiodothyronine strongly affects the fluidity of model membranes: its addition leads to a significant decrease in the temperature and cooperativity of the main phase transition of DPPC, calcein leakage from DOPC vesicles, fluidization of solid domains in DOPC/DPPC liposomes, and promotion of lipid curvature stress. Thyroxine exerts a weaker effect. Xanthene dyes do not influence the phase transition of DPPC. Despite the decrease in the dipole potential, thyroid hormones modulate SRE channels predominantly via the elastic properties of the membrane, whereas the xanthene dyes Rose Bengal, phloxine B and erythrosine affect SRE channels via bilayer electrostatics.
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Affiliation(s)
- Svetlana S Efimova
- Institute of Cytology of the Russian Academy of Sciences, St. Petersburg 194064, Russia.
| | | | - Artem A Ismagilov
- Institute of Cytology of the Russian Academy of Sciences, St. Petersburg 194064, Russia
| | - Ludmila V Schagina
- Institute of Cytology of the Russian Academy of Sciences, St. Petersburg 194064, Russia
| | - Valery V Malev
- Institute of Cytology of the Russian Academy of Sciences, St. Petersburg 194064, Russia; St. Petersburg State University, Petergof 198504, Russia
| | - Pavel V Bashkirov
- Federal Research and Clinical Centre of Physical-Chemical Medicine, Moscow 119435, Russia
| | - Olga S Ostroumova
- Institute of Cytology of the Russian Academy of Sciences, St. Petersburg 194064, Russia
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Bier M, Lisowski B, Gudowska-Nowak E. Phase transitions and entropies for synchronizing oscillators. Phys Rev E 2016; 93:012143. [PMID: 26871059 DOI: 10.1103/physreve.93.012143] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2015] [Indexed: 06/05/2023]
Abstract
We study a generic model of coupled oscillators. In the model there is competition between phase synchronization and diffusive effects. For a model with a finite number of states we derive how a phase transition occurs when the coupling parameter is varied. The phase transition is characterized by a symmetry breaking and a discontinuity in the first derivative of the order parameter. We quantitatively account for how the synchronized pulse is a low-entropy structure that facilitates the production of more entropy by the system as a whole. For a model with many states we apply a continuum approximation and derive a potential Burgers' equation for a propagating pulse. No phase transition occurs in that case. However, positive entropy production by diffusive effects still exceeds negative entropy production by the shock formation.
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Affiliation(s)
- Martin Bier
- M. Smoluchowski Institute of Physics, Jagiellonian University, ul. Łojasiewicza 11, 30-348 Kraków, Poland
- Department of Physics, East Carolina University, Greenville, North Carolina 27858, USA
| | - Bartosz Lisowski
- M. Smoluchowski Institute of Physics, Jagiellonian University, ul. Łojasiewicza 11, 30-348 Kraków, Poland
- Unit of Pharmacoepidemiology and Pharmacoeconomics, Faculty of Pharmacy, Jagiellonian University Medical College, ul. Medyczna 9, 30-688 Kraków, Poland
| | - Ewa Gudowska-Nowak
- M. Smoluchowski Institute of Physics, Jagiellonian University, ul. Łojasiewicza 11, 30-348 Kraków, Poland
- Mark Kac Center for Complex Systems Research and Malopolska Center of Biotechnology, Jagiellonian University, Gronostajowa 7A, 30-387 Kraków, Poland
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Two types of syringomycin E channels in sphingomyelin-containing bilayers. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2015; 45:91-8. [DOI: 10.1007/s00249-015-1101-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2015] [Revised: 10/19/2015] [Accepted: 11/11/2015] [Indexed: 10/22/2022]
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Modifiers of membrane dipole potentials as tools for investigating ion channel formation and functioning. INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY 2015; 315:245-97. [PMID: 25708465 DOI: 10.1016/bs.ircmb.2014.12.001] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Electrostatic fields generated on and within biological membranes play a fundamental role in key processes in cell functions. The role of the membrane dipole potential is of particular interest because of its powerful impact on membrane permeability and lipid-protein interactions, including protein insertion, oligomerization, and function. The membrane dipole potential is defined by the orientation of electric dipoles of lipid headgroups, fatty acid carbonyl groups, and membrane-adsorbed water. As a result, the membrane interior is several hundred millivolts more positive than the external aqueous phase. This potential decrease depends on the lipid, and especially sterol, composition of the membrane. The adsorption of certain electroneutral molecules known as dipole modifiers may also lead to significant changes in the magnitude of the potential decrease. These agents are widely used to study the effects of the dipole potential on membrane transport. This review presents a critical analysis of a variety of data from studies dedicated to ion channel formation and functioning in membranes with different dipole potentials. The types of ion channels found in cellular membranes and pores formed by antimicrobial agents and toxins in artificial lipid membranes are summarized. The mechanisms underlying the influence of the membrane dipole potential on ion channel activity, including dipole-dipole and charge-dipole interactions in the pores and in membranes, are discussed. A hypothesis, in which lipid rafts in both model and cellular membranes also modulate ion channel activity by virtue of an increased or decreased dipole potential, is also considered.
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Ostroumova OS, Malev VV, Bessonov AN, Takemoto JY, Schagina LV. Altering the activity of syringomycin E via the membrane dipole potential. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2008; 24:2987-2991. [PMID: 18324870 DOI: 10.1021/la800206v] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
The membrane dipole potential is responsible for the modulation of numerous biological processes. It was previously shown (Ostroumova, O. S.; Kaulin, Y. A.; Gurnev, P. A.; Schagina, L. V. Langmuir 2007, 23, 6889-6892) that variations in the dipole potential lead to changes in the channel properties of the antifungal lipodepsipeptide syringomycin E (SRE). Here, data are presented demonstrating the effect of the membrane dipole potential on the channel-forming activity of SRE. A rise in the dipole potential is accompanied by both an increase in the minimum SRE concentration required for the detection of single channels at fixed voltage and a decrease in the steady-state number of open SRE channels at a given SRE concentration and voltage. These alterations are determined by several factors: gating charge, connected with translocations of lipid and SRE dipoles during channel formation, the bilayer-water solution partitioning of SRE, and the chemical work related to conformational changes during channel formation.
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Affiliation(s)
- Olga S Ostroumova
- Institute of Cytology of the Russian Academy of Sciences, St. Petersburg 194064, Russia.
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Chapter 3 Voltage‐Dependent Ion Channels Induced by Cyclic Lipodepsipeptides in Planar Lipid Bilayers. ACTA ACUST UNITED AC 2008. [DOI: 10.1016/s1554-4516(08)00203-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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Ostroumova OS, Kaulin YA, Gurnev PA, Schagina LV. Effect of agents modifying the membrane dipole potential on properties of syringomycin E channels. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2007; 23:6889-92. [PMID: 17508767 DOI: 10.1021/la7005452] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
We evaluated the effect of agents modifying the membrane dipole potential: phloretin, 6-ketocholestanol and RH 421 on the properties of single channels formed by lipodepsipeptide syringomycin E (SRE) in planar lipid bilayers. SRE forms two conductive states in lipid bilayers: "small" and "large." Large SRE channels are clusters of several small ones, demonstrating synchronous openings and closures. The increase in the membrane dipole potential led to (i) an increase in SRE channel conductance, (ii) an increase in the channel's lifetime, and (iii) a decrease in a number of synchronously operating small channels in the clusters. Overall, the results support the model of the small SRE channel synchronization in the cluster as voltage-dependent orientation of the lipid dipoles associated with the channel pores.
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Affiliation(s)
- Olga S Ostroumova
- Institute of Cytology of the Russian Academy of Sciences, St. Petersburg 194064, Russia
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Ostroumova OS, Gurnev PA, Schagina LV, Bezrukov SM. Asymmetry of syringomycin E channel studied by polymer partitioning. FEBS Lett 2007; 581:804-8. [PMID: 17289034 PMCID: PMC1866293 DOI: 10.1016/j.febslet.2007.01.063] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2006] [Revised: 01/22/2007] [Accepted: 01/24/2007] [Indexed: 11/28/2022]
Abstract
To probe the size of the ion channel formed by Pseudomonas syringae lipodepsipeptide syringomycin E, we use the partial blockage of ion current by penetrating poly(ethylene glycol)s. Earlier experiments with symmetric application of these polymers yielded a radius estimate of approximately 1 nm. Now, motivated by the asymmetric non-ohmic current-voltage curves reported for this channel, we explore its structural asymmetry. We gauge this asymmetry by studying the channel conductance after one-sided addition of differently sized poly(ethylene glycol)s. We find that small polymers added to the cis-side of the membrane (the side of lipodepsipeptide addition) reduce channel conductance much less than do the same polymers added to the trans-side. We interpret our results to suggest that the water-filled pore of the channel is conical with cis- and trans-radii differing by a factor of 2-3 and that the smaller cis-radius is in the 0.25-0.35 nm range. In symmetric, two-sided addition, polymers entering the pore from the larger opening dominate blockage.
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Affiliation(s)
- Olga S Ostroumova
- Institute of Cytology of the Russian Academy of Sciences, St. Petersburg, 194064, Russia
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