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Chen Z, Dai Y, Gao F, Liu J, He J, Zhang L, Wu Y. Integrative analysis of crosstalk genes and diagnostic biomarkers in lupus-associated osteoporosis. Int J Immunopathol Pharmacol 2025; 39:3946320251331842. [PMID: 40298129 PMCID: PMC12041714 DOI: 10.1177/03946320251331842] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2024] [Accepted: 03/16/2025] [Indexed: 04/30/2025] Open
Abstract
Systemic lupus erythematosus (SLE) patients are at greater risk of developing osteoporosis (OP) than the general population. This study aimed to identify crosstalk genes between SLE and OP and to validate their diagnostic accuracy as biomarkers. Data analysis based on Gene Expression Omnibus (GEO) datasets was conducted. We utilized Weighted Gene Co-Expression Network Analysis (WGCNA) and differential expression analysis to identify crosstalk genes (CGs). Machine learning algorithms and consensus clustering were applied to screen shared diagnostic biomarkers and construct two predictive models featuring key genes. We also investigated potential subgroups, immune infiltration across different subtypes, and validated hub mRNAs using quantitative real-time PCR (qPCR). Molecular docking was performed to simulate the interaction of a small molecule compound with its target. We identified 19 CGs and developed two predictive models: the IL1R2-GADD45B and CHI3L1-IL1R2-SPTLC2 diagnostic score thresholds. The CHI3L1-IL1R2-SPTLC2 model showed improved predictive accuracy for lupus-associated osteoporosis. The C2 subtype was found to potentially regulate bone metabolism in SLE patients. Immune infiltration analysis indicated a strong association between CGs and multiple immunocytes, with IL1R2 being a common element in both models. Molecular docking suggests that Anakinra's therapeutic effect may involve IL1R2. Our study introduces novel diagnostic biomarkers and predictive models for lupus-associated osteoporosis, with a particular focus on IL1R2 as an innovative biomarker and therapeutic target. These are anticipated to aid early screening and risk assessment in SLE patients, pending large-scale clinical validation.
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Affiliation(s)
- Zhihan Chen
- Shengli Clinical Medical College, Fujian Medical University, Fuzhou, China
- Department of Rheumatology, Fujian Provincial Hospital, Fuzhou, China
| | - Yunfeng Dai
- Shengli Clinical Medical College, Fujian Medical University, Fuzhou, China
- Department of Rheumatology, Fujian Provincial Hospital, Fuzhou, China
| | - Fei Gao
- Shengli Clinical Medical College, Fujian Medical University, Fuzhou, China
- Department of Rheumatology, Fujian Provincial Hospital, Fuzhou, China
| | - Jianwen Liu
- Shengli Clinical Medical College, Fujian Medical University, Fuzhou, China
- Department of Rheumatology, Fujian Provincial Hospital, Fuzhou, China
| | - Juanjuan He
- Shengli Clinical Medical College, Fujian Medical University, Fuzhou, China
- Department of Rheumatology, Fujian Provincial Hospital, Fuzhou, China
| | - Li Zhang
- Shengli Clinical Medical College, Fujian Medical University, Fuzhou, China
- Department of Nephrology, Fujian Provincial Hospital, Fuzhou, China
| | - Yanfang Wu
- Shengli Clinical Medical College, Fujian Medical University, Fuzhou, China
- Department of Rheumatology, Fujian Provincial Hospital, Fuzhou, China
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Fedorov FS, Yaqin A, Krasnikov DV, Kondrashov VA, Ovchinnikov G, Kostyukevich Y, Osipenko S, Nasibulin AG. Detecting cooking state of grilled chicken by electronic nose and computer vision techniques. Food Chem 2020; 345:128747. [PMID: 33307429 DOI: 10.1016/j.foodchem.2020.128747] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 11/21/2020] [Accepted: 11/25/2020] [Indexed: 01/26/2023]
Abstract
Determination of food doneness remains a challenge for automation in the cooking industry. The complex physicochemical processes that occur during cooking require a combination of several methods for their control. Herein, we utilized an electronic nose and computer vision to check the cooking state of grilled chicken. Thermogravimetry, differential mobility analysis, and mass spectrometry were employed to deepen the fundamental insights towards the grilling process. The results indicated that an electronic nose could distinguish the odor profile of the grilled chicken, whereas computer vision could identify discoloration of the chicken. The integration of these two methods yields greater selectivity towards the qualitative determination of chicken doneness. The odor profile is matched with detected water loss, and the release of aromatic and sulfur-containing compounds during cooking. This work demonstrates the practicability of the developed technique, which we compared with a sensory evaluation, for better deconvolution of food state during cooking.
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Affiliation(s)
- Fedor S Fedorov
- Laboratory of Nanomaterials, Skolkovo Institute of Science and Technology, 3 Nobel St., 121205 Moscow, Russia.
| | - Ainul Yaqin
- Laboratory of Nanomaterials, Skolkovo Institute of Science and Technology, 3 Nobel St., 121205 Moscow, Russia.
| | - Dmitry V Krasnikov
- Laboratory of Nanomaterials, Skolkovo Institute of Science and Technology, 3 Nobel St., 121205 Moscow, Russia.
| | - Vladislav A Kondrashov
- Laboratory of Nanomaterials, Skolkovo Institute of Science and Technology, 3 Nobel St., 121205 Moscow, Russia.
| | - George Ovchinnikov
- Center for Computational and Data-Intensive Science and Engineering, Skolkovo Institute of Science and Technology, 3 Nobel Str., 121205 Moscow, Russia.
| | - Yury Kostyukevich
- Center for Computational and Data-Intensive Science and Engineering, Skolkovo Institute of Science and Technology, 3 Nobel Str., 121205 Moscow, Russia.
| | - Sergey Osipenko
- Center for Computational and Data-Intensive Science and Engineering, Skolkovo Institute of Science and Technology, 3 Nobel Str., 121205 Moscow, Russia.
| | - Albert G Nasibulin
- Laboratory of Nanomaterials, Skolkovo Institute of Science and Technology, 3 Nobel St., 121205 Moscow, Russia; Aalto University, 00076 Espoo, Finland.
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Cisneros-Carrillo H, Hernandez-Aguilar C, Dominguez-Pacheco A, Cruz-Orea A, Zepeda-Bautista R. Thermal analysis and artificial vision of laser irradiation on corn. SN APPLIED SCIENCES 2020. [DOI: 10.1007/s42452-020-03402-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
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Leiva-Valenzuela GA, Quilaqueo M, Mariotti-Celis MS, Letelier K, Estay D, Pedreschi F. Predicting furan content in a fried dough system using image analysis. Food Chem 2019; 298:125096. [DOI: 10.1016/j.foodchem.2019.125096] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Revised: 05/24/2019] [Accepted: 06/26/2019] [Indexed: 11/15/2022]
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Jerome RE, Singh SK, Dwivedi M. Process analytical technology for bakery industry: A review. J FOOD PROCESS ENG 2019. [DOI: 10.1111/jfpe.13143] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Rifna E. Jerome
- Department of Food Process EngineeringNational Institute of Technology Rourkela Rourkela Odisha India
| | - Sushil K. Singh
- Department of Food Process EngineeringNational Institute of Technology Rourkela Rourkela Odisha India
| | - Madhuresh Dwivedi
- Department of Food Process EngineeringNational Institute of Technology Rourkela Rourkela Odisha India
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