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Sun J, Shi Z, Tan Q, Zhong M, Wang N, Xin S, Liu X, Li R, Ma Y, Wu K, Cui Y, Hui W. An Integrated Micro-Heating System for On-Chip Isothermal Amplification of African Swine Fever Virus Genes. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2024; 20:e2402446. [PMID: 39194585 DOI: 10.1002/smll.202402446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2024] [Revised: 07/30/2024] [Indexed: 08/29/2024]
Abstract
The loop-mediated isothermal amplification (LAMP) is widely used in the laboratory to facilitate rapid DNA or RNA detection with a streamlined operational process, whose properties are greatly dependent on the uniformity and rise rate of temperature in the reaction chambers and the design of the primers. This paper introduces a planar micro-heater equipped with an embedded micro-temperature sensor to realize temperature tunability at a low energy cost. Moreover, a control system, based on the Wheatstone bridge and proportional, integral, and derivative (PID) control, is designed to measure and adjust the temperature of the micro-heater. The maximum temperature rise rate of the designed micro-heater is ≈8 °C s-1, and it only takes ≈60 s to reach the target temperature. Furthermore, a designed plasmid, containing the B646L gene of African Swine Fever Virus (ASFV), and a set of specific primers, are used to combine with the designed micro-heating system to implement the LAMP reaction. Finally, the lateral flow assay is used to interpret the amplification results visually. This method can achieve highly sensitive and efficient detection of ASFV within 40 min. The sensitivity of this on-chip gene detection method is 8.4 copies per reaction, holding great potential for applications in DNA and RNA amplification.
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Affiliation(s)
- Jiajia Sun
- State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, No. 28 Xianning West Road, Xi'an, Shaanxi Province, 710049, China
| | - Zongqian Shi
- State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, No. 28 Xianning West Road, Xi'an, Shaanxi Province, 710049, China
| | - Qiongxiang Tan
- College of Life Sciences, Northwest University, Xi'an, 710069, China
| | - Mingjie Zhong
- State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, No. 28 Xianning West Road, Xi'an, Shaanxi Province, 710049, China
| | - Nan Wang
- State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, No. 28 Xianning West Road, Xi'an, Shaanxi Province, 710049, China
| | - Shumin Xin
- State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, No. 28 Xianning West Road, Xi'an, Shaanxi Province, 710049, China
| | - Xiaofeng Liu
- State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, No. 28 Xianning West Road, Xi'an, Shaanxi Province, 710049, China
| | - Ruohan Li
- State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, No. 28 Xianning West Road, Xi'an, Shaanxi Province, 710049, China
| | - Yuxin Ma
- State Key Laboratory of Electrical Insulation and Power Equipment, Xi'an Jiaotong University, No. 28 Xianning West Road, Xi'an, Shaanxi Province, 710049, China
| | - Kai Wu
- Department of Electrical and Computer Engineering, Texas Tech University, Lubbock, TX, 79401, USA
| | - Yali Cui
- College of Life Sciences, Northwest University, Xi'an, 710069, China
| | - Wenli Hui
- College of Life Sciences, Northwest University, Xi'an, 710069, China
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Suaifan GARY, Shehadeh MB, Darwish R, Alterify M, Abu Jbara W, Abu Jbara F, Zourob M. Magnetic Nanobead Paper-Based Biosensors for Colorimetric Detection of Candida albicans. ACS OMEGA 2024; 9:43005-43015. [PMID: 39464470 PMCID: PMC11500164 DOI: 10.1021/acsomega.4c05941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Revised: 09/09/2024] [Accepted: 09/13/2024] [Indexed: 10/29/2024]
Abstract
Candida albicans (C. albicans) infections pose significant challenges in clinical settings due to their high morbidity and mortality rates in addition to their role in tumor progression. Current diagnostic methods, while effective, often suffer from limitations that hinder a timely intervention. Therefore, there is an urgent need for a simple, sensitive, specific, and low-cost colorimetric biosensor for the rapid detection of C. albicans. This new biosensing platform comprises a gold platform carrying a specific C. albicans peptide substrate conjugated with magnetic nanobeads. Hence, the sensing platform was black, and the operation was based on the proteolytic activity of C. albicans, offering a visual color change to yellow upon cleavage of the conjugated peptide substrates on the magnetic nanobeads. Specificity testing demonstrated the biosensor's ability to distinguish C. albicans from other Candida species and microorganisms, while stability testing confirmed its long-term performance. Clinical testing revealed the biosensor's high sensitivity in detecting C. albicans in both standard cultures and clinically isolated samples with a lower limit of detestation of 3.5 × 103 CFU/mL. Although further validation against conventional and molecular methods is warranted, our colorimetric biosensor holds promise as a rapid (5 min) and cheap (Less than 2 $) point-of-care solution for the early detection of C. albicans infections, facilitating a timely intervention and improving patient outcomes in clinical practice.
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Affiliation(s)
- Ghadeer A. R. Y. Suaifan
- Department
of Pharmaceutical Sciences, School of Pharmacy, The University of Jordan, Amman 11942, Jordan
| | - Mayadah B. Shehadeh
- Department
of Pharmaceutical Sciences, School of Pharmacy, The University of Jordan, Amman 11942, Jordan
| | - Rula Darwish
- Department
of Pharmaceutics and Pharmaceutical Biotechnology, School of Pharmacy, The University of Jordan, Amman 11942, Jordan
| | - Manar Alterify
- Department
of Pharmaceutical Sciences, School of Pharmacy, The University of Jordan, Amman 11942, Jordan
| | - Ward Abu Jbara
- School
of Medicine, The University of Jordan, Amman 11942, Jordan
| | - Fahid Abu Jbara
- School
of Dentistry, The University of Jordan, Amman 11942, Jordan
| | - Mohammed Zourob
- Department
of Pharmaceutical Sciences, School of Pharmacy, The University of Jordan, Amman 11942, Jordan
- Department
of Chemistry, Alfaisal University, Al Takhassusi Rd, Riyadh 11533, Saudi Arabia
- King Faisal
Specialist Hospital and Research Center, Zahrawi Street, Al Maather, Riyadh 12713, Saudi Arabia
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Clack K, Sallam M, Matheson C, Muyldermans S, Nguyen NT. Towards a Wearable Feminine Hygiene Platform for Detection of Invasive Fungal Pathogens via Gold Nanoparticle Aggregation. MICROMACHINES 2024; 15:899. [PMID: 39064410 PMCID: PMC11278863 DOI: 10.3390/mi15070899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 07/01/2024] [Accepted: 07/09/2024] [Indexed: 07/28/2024]
Abstract
Candida albicans is an opportunistic fungus that becomes pathogenic and problematic under certain biological conditions. C. albicans may cause painful and uncomfortable symptoms, as well as deaths in immunocompromised patients. Therefore, early detection of C. albicans is essential. However, conventional detection methods are costly, slow, and inaccessible to women in remote or developing areas. To address these concerns, we have developed a wearable and discrete naked-eye detectable colorimetric platform for C. albicans detection. With some modification, this platform is designed to be directly adhered to existing feminine hygiene pads. Our platform is rapid, inexpensive, user-friendly, and disposable and only requires three steps: (i) the addition of vaginal fluid onto sample pads; (ii) the addition of gold nanoparticle gel and running buffer, and (iii) naked eye detection. Our platform is underpinned by selective thiolated aptamer-based recognition of 1,3-β-D glucan molecules-a hallmark of C. albicans cell walls. In the absence of C. albicans, wearable sample pads turn bright pink. In the presence of C. albicans, the wearable pads turn dark blue due to significant nanoparticle target-induced aggregation. We demonstrate naked-eye colorimetric detection of 4.4 × 106C. albicans cells per ml and nanoparticle stability over a pH range of 3.0-8.0. We believe that this proof-of-concept platform has the potential to have a significant impact on women's health globally.
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Affiliation(s)
- Kimberley Clack
- Queensland Micro and Nanotechnology Centre (QMNC), Griffith University, Nathan Campus, Nathan, QLD 4111, Australia; (K.C.); (M.S.)
- School of Environment and Science (ESC), Griffith University, Nathan Campus, Nathan, QLD 4111, Australia;
| | - Mohamed Sallam
- Queensland Micro and Nanotechnology Centre (QMNC), Griffith University, Nathan Campus, Nathan, QLD 4111, Australia; (K.C.); (M.S.)
- School of Environment and Science (ESC), Griffith University, Nathan Campus, Nathan, QLD 4111, Australia;
- Griffith Institute for Drug Discovery (GRIDD), Griffith University, Nathan Campus, Nathan, QLD 4111, Australia
| | - Carney Matheson
- School of Environment and Science (ESC), Griffith University, Nathan Campus, Nathan, QLD 4111, Australia;
| | - Serge Muyldermans
- Laboratory of Cellular and Molecular Immunology (CMIM), Vrije Universiteit Brussel, 1050 Brussels, Belgium;
| | - Nam-Trung Nguyen
- Queensland Micro and Nanotechnology Centre (QMNC), Griffith University, Nathan Campus, Nathan, QLD 4111, Australia; (K.C.); (M.S.)
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Clack K, Sallam M, Muyldermans S, Sambasivam P, Nguyen CM, Nguyen NT. Instant Candida albicans Detection Using Ultra-Stable Aptamer Conjugated Gold Nanoparticles. MICROMACHINES 2024; 15:216. [PMID: 38398945 PMCID: PMC10892967 DOI: 10.3390/mi15020216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2024] [Revised: 01/29/2024] [Accepted: 01/29/2024] [Indexed: 02/25/2024]
Abstract
Fungal pathogens such as Candida albicans have significant impacts on women's health and the economy worldwide. Current detection methods often require access to laboratory facilities that are costly, inconvenient, and slow to access. This often leads to self-diagnosis, self-treatment and eventual antifungal resistance. We have created a rapid (within five minutes), cost-effective, and user-friendly method for the early detection of Candida albicans. Our platform utilises aptamer-tagged-gold-core-shell nanoparticles for Candida albicans detection based on the presence of 1,3-β-d glucan molecules. Nanoparticle aggregation occurs in the presence of Candida albicans fungal cells, causing a redshift in the UV-visible absorbance, turning from pink/purple to blue. This colour change is perceptible by the naked eye and provides a "yes"/"no" result. Our platform was also capable of detecting Candida albicans from individual yeast colonies without prior sample processing, dilution or purification. Candida albicans yeast cells were detected with our platform at concentrations as low as 5 × 105 cells within a 50 μL sample volume. We believe that this technology has the potential to revolutionise women's health, enabling women to test for Candida albicans accurately and reliably from home. This approach would be advantageous within remote or developing areas.
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Affiliation(s)
- Kimberley Clack
- Queensland Micro and Nanotechnology Centre (QMNC), Nathan Campus, Griffith University, Nathan, QLD 4111, Australia; (K.C.); (M.S.); (C.M.N.)
| | - Mohamed Sallam
- Queensland Micro and Nanotechnology Centre (QMNC), Nathan Campus, Griffith University, Nathan, QLD 4111, Australia; (K.C.); (M.S.); (C.M.N.)
- School of Environment and Science (ESC), Nathan Campus, Griffith University, Nathan, QLD 4111, Australia
- Griffith Institute for Drug Discovery (GRIDD), Nathan Campus, Griffith University, Nathan, QLD 4111, Australia
| | - Serge Muyldermans
- Laboratory of Cellular and Molecular Immunology (CMIM), Vrije Universiteit Brussel, 1050 Brussels, Belgium;
| | - Prabhakaran Sambasivam
- Centre for Planetary Health and Food Security, Nathan Campus, Griffith University, Nathan, QLD 4111, Australia
| | - Cong Minh Nguyen
- Queensland Micro and Nanotechnology Centre (QMNC), Nathan Campus, Griffith University, Nathan, QLD 4111, Australia; (K.C.); (M.S.); (C.M.N.)
- School of Environment and Science (ESC), Nathan Campus, Griffith University, Nathan, QLD 4111, Australia
| | - Nam-Trung Nguyen
- Queensland Micro and Nanotechnology Centre (QMNC), Nathan Campus, Griffith University, Nathan, QLD 4111, Australia; (K.C.); (M.S.); (C.M.N.)
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Roumani F, Rodrigues C, Barros-Velázquez J, Garrido-Maestu A, Prado M. Development of a Panfungal Recombinase Polymerase Amplification (RPA) Method Coupled with Lateral Flow Strips for the Detection of Spoilage Fungi. FOOD ANAL METHOD 2022. [DOI: 10.1007/s12161-022-02242-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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