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Guo X, Pang L, Chen P, Jiang Q, Zhong Y. Deep ensemble framework with Bayesian optimization for multi-lesion recognition in capsule endoscopy images. Med Biol Eng Comput 2025:10.1007/s11517-025-03380-4. [PMID: 40411689 DOI: 10.1007/s11517-025-03380-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Accepted: 05/10/2025] [Indexed: 05/26/2025]
Abstract
In order to address the challenges posed by the large number of images acquired during wireless capsule endoscopy examinations and fatigue-induced leakage and misdiagnosis, a deep ensemble framework is proposed, which consists of CA-EfficientNet-B0, ECA-RegNetY, and Swin transformer as base learners. The ensemble model aims to automatically recognize four lesions in capsule endoscopy images, including angioectasia, bleeding, erosions, and polyps. All the three base learners employed transfer learning, with the inclusion of attention modules in EfficientNet-B0 and RegNetY for optimization. The recognition outcomes from the three base learners were subsequently combined and weighted to facilitate automatic recognition of multi-lesion images and normal images of the gastrointestinal (GI) tract. The weights were determined through the Bayesian optimization. The experiment collected a total of 8358 images of 281 cases at Shanghai East Hospital from 2017 to 2021. These images were organized and labeled by clinicians to verify the performance of the algorithm. The experimental results showed that the model achieved an accuracy of 84.31%, m-Precision of 88.60%, m-Recall of 79.36%, and m-F1-score of 81.08%. Compared to mainstream deep learning models, the ensemble model effectively improves the classification performance of GI diseases and can assist clinicians in making initial diagnoses of GI diseases.
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Affiliation(s)
- Xudong Guo
- School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China.
| | - Liying Pang
- School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China
| | - Peiyu Chen
- School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, 200093, China
| | - Qinfen Jiang
- Department of Information Technology, Shanghai East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.
| | - Yukai Zhong
- Shanghai Yangpu District Kongjiang Hospital, Shanghai, 200093, China
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2
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Martinez M, Bartel MJ, Chua T, Dakhoul L, Fatima H, Glessing B, Jensen D, Lara LF, Shinn B, Tadros M, Villa E, Saltzman JR. The 2024 top 10 list of endoscopy topics in medical publishing: an annual review by the American Society for Gastrointestinal Endoscopy Editorial Board. Gastrointest Endosc 2025:S0016-5107(25)01512-3. [PMID: 40402124 DOI: 10.1016/j.gie.2025.04.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/02/2025] [Accepted: 04/02/2025] [Indexed: 05/23/2025]
Abstract
Using a systematic literature search of original articles published during 2024 in Gastrointestinal Endoscopy (GIE) and other high-impact medical and gastroenterology journals, the GIE Editorial Board of the American Society for Gastrointestinal Endoscopy compiled a list of the top 10 most significant topic areas in general and advanced GI endoscopy during the year. Each GIE Editorial Board member was directed to consider 3 criteria in generating candidate topics: significance, novelty, and impact on clinical practice. Subject matter consensus was facilitated by the Chair through electronic voting of the entire GIE Editorial Board. The top 10 identified topics collectively represent advances in the following endoscopic areas: glucagon-like peptide-1 receptor agonists and endoscopy, advances in AI in endoscopy, ergonomics in endoscopy, peroral endoscopic myotomy, bariatric and metabolic endoscopy, endoscopic resection in the colon, gastric intestinal metaplasia and endoscopy, inflammatory bowel disease and endoscopy, GI bleeding risk stratification and endoscopic therapies, and therapeutic EUS. Board members were assigned a topic area and summarized relevant and important articles, thereby generating this overview of the "top 10" endoscopic advances of 2024.
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Affiliation(s)
| | | | - Tiffany Chua
- Department of Gastroenterology, Hepatology and Nutrition, University of Florida, Gainesville, Florida, USA
| | - Lara Dakhoul
- Locum Tenens Gastroenterologist and Hepatologist
| | - Hala Fatima
- Department of Internal Medicine, Division of Gastroenterology, Indiana University School of Medicine, Indianapolis, Indiana, USA
| | - Brooke Glessing
- The Gastroenterology Group, Inc and Summa Health Healthcare System, Akron, Ohio, USA
| | - Dennis Jensen
- Ronald Reagan UCLA Medical Center and The VA Greater Los Angeles Healthcare System, David Geffen School of Medicine at UCLA, Los Angeles, California, USA
| | - Luis F Lara
- Penn Presbyterian Medical Center, Philadelphia, Pennsylvania, USA
| | - Brianna Shinn
- Perelman Center for Advanced Medicine, Philadelphia, Pennsylvania, USA
| | - Micheal Tadros
- Division of Gastroenterology, Albany Medical Center, Albany, New York, USA
| | | | - John R Saltzman
- Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA.
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George AT, Rubin DT. Artificial Intelligence in Inflammatory Bowel Disease. Gastrointest Endosc Clin N Am 2025; 35:367-387. [PMID: 40021234 DOI: 10.1016/j.giec.2024.10.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/03/2025]
Abstract
Artificial intelligence (AI) is being increasingly studied and implemented in gastroenterology. In inflammatory bowel disease (IBD), numerous AI models are being developed to assist with IBD diagnosis, standardization of endoscopic and radiologic disease activity, and predicting outcomes. Further prospective, multicenter studies representing diverse populations and novel applications are needed prior to routine implementation in clinical practice and expected improved outcomes for clinicians and patients.
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Affiliation(s)
- Alvin T George
- Department of Medicine, The University of Chicago, Chicago, IL, USA
| | - David T Rubin
- Department of Medicine, Inflammatory Bowel Disease Center, The University of Chicago, Chicago, IL, USA.
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Testoni SGG, Albertini Petroni G, Annunziata ML, Dell’Anna G, Puricelli M, Delogu C, Annese V. Artificial Intelligence in Inflammatory Bowel Disease Endoscopy. Diagnostics (Basel) 2025; 15:905. [PMID: 40218255 PMCID: PMC11988936 DOI: 10.3390/diagnostics15070905] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2025] [Accepted: 02/19/2025] [Indexed: 04/14/2025] Open
Abstract
Inflammatory bowel diseases (IBDs), comprising Crohn's disease (CD) and ulcerative colitis (UC), are chronic immune-mediated inflammatory diseases of the gastrointestinal (GI) tract with still-elusive etiopathogeneses and an increasing prevalence worldwide. Despite the growing availability of more advanced therapies in the last two decades, there are still a number of unmet needs. For example, the achievement of mucosal healing has been widely demonstrated as a prognostic marker for better outcomes and a reduced risk of dysplasia and cancer; however, the accuracy of endoscopy is crucial for both this aim and the precise and reproducible evaluation of endoscopic activity and the detection of dysplasia. Artificial intelligence (AI) has drastically altered the field of GI studies and is being extensively applied to medical imaging. The utilization of deep learning and pattern recognition can help the operator optimize image classification and lesion segmentation, detect early mucosal abnormalities, and eventually reveal and uncover novel biomarkers with biologic and prognostic value. The role of AI in endoscopy-and potentially also in histology and imaging in the context of IBD-is still at its initial stages but shows promising characteristics that could lead to a better understanding of the complexity and heterogeneity of IBDs, with potential improvements in patient care and outcomes. The initial experience with AI in IBDs has shown its potential value in the differentiation of UC and CD when there is no ileal involvement, reducing the significant amount of time it takes to review videos of capsule endoscopy and improving the inter- and intra-observer variability in endoscopy reports and scoring. In addition, these initial experiences revealed the ability to predict the histologic score index and the presence of dysplasia. Thus, the purpose of this review was to summarize recent advances regarding the application of AI in IBD endoscopy as there is, indeed, increasing evidence suggesting that the integration of AI-based clinical tools will play a crucial role in paving the road to precision medicine in IBDs.
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Affiliation(s)
- Sabrina Gloria Giulia Testoni
- Unit of Gastroenterology and Digestive Endoscopy, Scientific Institute for Research, Hospitalization and Healthcare Policlinico San Donato, Vita-Salute San Raffaele University, San Donato Milanese, 20097 Milan, Italy
- Unit of Gastroenterology and Digestive Endoscopy, Scientific Institute for Research, Hospitalization and Healthcare Policlinico San Donato, San Donato Milanese, 20097 Milan, Italy
| | - Guglielmo Albertini Petroni
- Unit of Gastroenterology and Digestive Endoscopy, Scientific Institute for Research, Hospitalization and Healthcare Policlinico San Donato, San Donato Milanese, 20097 Milan, Italy
| | - Maria Laura Annunziata
- Unit of Gastroenterology and Digestive Endoscopy, Scientific Institute for Research, Hospitalization and Healthcare Policlinico San Donato, San Donato Milanese, 20097 Milan, Italy
| | - Giuseppe Dell’Anna
- Unit of Gastroenterology and Digestive Endoscopy, Scientific Institute for Research, Hospitalization and Healthcare Policlinico San Donato, San Donato Milanese, 20097 Milan, Italy
| | - Michele Puricelli
- School of Specialization in Digestive System Diseases, Faculty of Medicine, University of Pavia, 27100 Pavia, Italy
| | - Claudia Delogu
- School of Specialization in Digestive System Diseases, Faculty of Medicine, University of Pavia, 27100 Pavia, Italy
| | - Vito Annese
- Unit of Gastroenterology and Digestive Endoscopy, Scientific Institute for Research, Hospitalization and Healthcare Policlinico San Donato, Vita-Salute San Raffaele University, San Donato Milanese, 20097 Milan, Italy
- Unit of Gastroenterology and Digestive Endoscopy, Scientific Institute for Research, Hospitalization and Healthcare Policlinico San Donato, San Donato Milanese, 20097 Milan, Italy
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Lee MCM, Farahvash A, Zezos P. Artificial Intelligence for Classification of Endoscopic Severity of Inflammatory Bowel Disease: A Systematic Review and Critical Appraisal. Inflamm Bowel Dis 2025:izaf050. [PMID: 40163659 DOI: 10.1093/ibd/izaf050] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/11/2024] [Indexed: 04/02/2025]
Abstract
BACKGROUND Endoscopic scoring indices for ulcerative colitis and Crohn's disease are subject to inter-endoscopist variability. There is increasing interest in the development of deep learning models to standardize endoscopic assessment of intestinal diseases. Here, we summarize and critically appraise the literature on artificial intelligence-assisted endoscopic characterization of inflammatory bowel disease severity. METHODS A systematic search of Ovid MEDLINE, EMBASE, Cochrane Central Register of Controlled Trials, and IEEE Xplore was performed to identify reports of AI systems used for endoscopic severity classification of IBD. Selected studies were critically appraised for methodological and reporting quality using APPRAISE-AI. RESULTS Thirty-one studies published between 2019 and 2024 were included. Of 31 studies, 28 studies examined endoscopic classification of ulcerative colitis and 3 examined Crohn's disease. Researchers sought to accomplish a wide range of classification tasks, including binary and multilevel classification, based on still images or full-length colonoscopy videos. Overall scores for study quality ranged from 41 (moderate quality) to 64 (high quality) out of 100, with 28 out of 31 studies within the moderate quality range. The highest-scoring domains were clinical relevance and reporting quality, while the lowest-scoring domains were robustness of results and reproducibility. CONCLUSIONS Multiple AI models have demonstrated the potential for clinical translation for ulcerative colitis. Research concerning the endoscopic severity assessment of Crohn's disease is limited and should be further explored. More rigorous external validation of AI models and increased transparency of data and codes are needed to improve the quality of AI studies.
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Affiliation(s)
- Michelle Chae Min Lee
- Division of Gastroenterology, Department of Internal Medicine, Thunder Bay Regional Health Sciences Centre, NOSM University, Thunder Bay, ON, Canada
| | - Armin Farahvash
- Division of Gastroenterology, Department of Internal Medicine, Thunder Bay Regional Health Sciences Centre, NOSM University, Thunder Bay, ON, Canada
| | - Petros Zezos
- Division of Gastroenterology, Department of Internal Medicine, Thunder Bay Regional Health Sciences Centre, NOSM University, Thunder Bay, ON, Canada
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Gu P, Mendonca O, Carter D, Dube S, Wang P, Huang X, Li D, Moore JH, McGovern DPB. AI-luminating Artificial Intelligence in Inflammatory Bowel Diseases: A Narrative Review on the Role of AI in Endoscopy, Histology, and Imaging for IBD. Inflamm Bowel Dis 2024; 30:2467-2485. [PMID: 38452040 DOI: 10.1093/ibd/izae030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Indexed: 03/09/2024]
Abstract
Endoscopy, histology, and cross-sectional imaging serve as fundamental pillars in the detection, monitoring, and prognostication of inflammatory bowel disease (IBD). However, interpretation of these studies often relies on subjective human judgment, which can lead to delays, intra- and interobserver variability, and potential diagnostic discrepancies. With the rising incidence of IBD globally coupled with the exponential digitization of these data, there is a growing demand for innovative approaches to streamline diagnosis and elevate clinical decision-making. In this context, artificial intelligence (AI) technologies emerge as a timely solution to address the evolving challenges in IBD. Early studies using deep learning and radiomics approaches for endoscopy, histology, and imaging in IBD have demonstrated promising results for using AI to detect, diagnose, characterize, phenotype, and prognosticate IBD. Nonetheless, the available literature has inherent limitations and knowledge gaps that need to be addressed before AI can transition into a mainstream clinical tool for IBD. To better understand the potential value of integrating AI in IBD, we review the available literature to summarize our current understanding and identify gaps in knowledge to inform future investigations.
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Affiliation(s)
- Phillip Gu
- F. Widjaja Inflammatory Bowel Disease Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | | | - Dan Carter
- Department of Gastroenterology, Sheba Medical Center, Tel Aviv, Israel
| | - Shishir Dube
- F. Widjaja Inflammatory Bowel Disease Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Paul Wang
- Department of Computational Biomedicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Xiuzhen Huang
- Department of Computational Biomedicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Debiao Li
- Biomedical Research Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Jason H Moore
- Department of Computational Biomedicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Dermot P B McGovern
- F. Widjaja Inflammatory Bowel Disease Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA
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