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Qian J, Shi B, Li Q, Gou L, Zhao C, Huang A. Synthesis of sucrose 6-acetate by immobilized aspergillus Niger lipase imprinted with oleic acid and sorbitol. Food Chem 2025; 468:142231. [PMID: 39700792 DOI: 10.1016/j.foodchem.2024.142231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2024] [Revised: 10/06/2024] [Accepted: 11/22/2024] [Indexed: 12/21/2024]
Abstract
Biological and interfacial imprinting both were effective methods to improve the catalytic performance of lipase in organic solvent. Bioimprinting combined with interfacial activation of lipase was investigated for obtaining imprinted lipase with excellent catalytic performance. Enzymatic synthesis of sucrose-6-acetate in organic solvents to test the performance of imprinted lipase immobilized by adsorbing on macroporous resin. Lipase imprinted by substrate analog (oleic acid) then immobilization catalyzed the synthesis of sucrose-6-acetate with a 1.7 times increase in sucrose esterification rate compared to unimprinted immobilized lipase and a selectivity toward sucrose-6-acetate of 91.7 %. The sucrose esterification rate of reaction catalyzed by immobilized lipase was increased to 2.0 times with addition of sorbitol after imprinting by oleic acid. Imprinting by oleic acid and interfacial effect generated by oleic acid with sorbitol both induced zymoprotein secondary structure change that were conducive to enhance catalytic activity and stability of lipase in organic solvent.
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Affiliation(s)
- Junqing Qian
- College of Pharmaceutical Engineering, Zhejiang University of Technology, Hangzhou 310014, China.
| | - Bobo Shi
- College of Pharmaceutical Engineering, Zhejiang University of Technology, Hangzhou 310014, China
| | - Qian Li
- College of Pharmaceutical Engineering, Zhejiang University of Technology, Hangzhou 310014, China
| | - Lihong Gou
- College of Pharmaceutical Engineering, Zhejiang University of Technology, Hangzhou 310014, China
| | - Changyan Zhao
- College of Pharmaceutical Engineering, Zhejiang University of Technology, Hangzhou 310014, China
| | - Aomei Huang
- College of Pharmaceutical Engineering, Zhejiang University of Technology, Hangzhou 310014, China
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2
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Li Q, Qian J, Huang A, Shi B, Gu G. Biocatalytic synthesis of L-ascorbyl palmitate using oleic acid imprinted Aspergillus niger lipase immobilized on resin. Food Chem 2025; 463:141075. [PMID: 39241420 DOI: 10.1016/j.foodchem.2024.141075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Revised: 07/09/2024] [Accepted: 08/29/2024] [Indexed: 09/09/2024]
Abstract
In order to improve the esterification efficiency of the enzymatic synthesis of l-ascorbic acid palmitate, the substrate analogue imprinting of the Aspergillus niger lipase-catalyzed esterification process was studied. Oleic acid was selected as the imprinting molecule, oleic acid imprinting immobilized lipase was prepared at pH 8.0, 0.1 g oleic acid, 1.5 mL of 95 % ethanol, and 0.1 g Tween-20. Through solubilization and supersaturation of Vitamin C, the reaction concentration of Vitamin C reached 5.00 % (m/v) in dioxane with 93.99 % esterification rate and 110.72 g/L of product concentration. Moreover, the Vitamin C reaction concentration can reach 8.00 % by using staged substrate feeding, and the esterification rate and product concentration of esterification after 28 h was 156.34 g/L and 82.96 %. Besides, the imprinting-induced conformational changes in enzyme proteins was characterized by fluorescence and infrared spectroscopy. This method provides a pathway for enzymatic production of l-ascorbic acid palmitate.
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Affiliation(s)
- Qian Li
- College of Pharmacy, Zhejiang University of Technology, Hangzhou, China
| | - Junqing Qian
- College of Pharmacy, Zhejiang University of Technology, Hangzhou, China.
| | - Aomei Huang
- College of Pharmacy, Zhejiang University of Technology, Hangzhou, China
| | - Bobo Shi
- College of Pharmacy, Zhejiang University of Technology, Hangzhou, China
| | - Guoxiu Gu
- College of Pharmacy, Zhejiang University of Technology, Hangzhou, China
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Roy S, Srinivasan VR, Arunagiri S, Mishra N, Bhatia A, Shejale KP, Prajapati KP, Kar K, Anand BG. Molecular insights into the phase transition of lysozyme into amyloid nanostructures: Implications of therapeutic strategies in diverse pathological conditions. Adv Colloid Interface Sci 2024; 331:103205. [PMID: 38875805 DOI: 10.1016/j.cis.2024.103205] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2023] [Revised: 05/13/2024] [Accepted: 05/21/2024] [Indexed: 06/16/2024]
Abstract
Lysozyme, a well-known bacteriolytic enzyme, exhibits a fascinating yet complex behavior when it comes to protein aggregation. Under certain conditions, this enzyme undergoes flexible transformation, transitioning from partially unfolded intermediate units of native conformers into complex cross-β-rich nano fibrillar amyloid architectures. Formation of such lysozyme amyloids has been implicated in a multitude of pathological and medical severities, like hepatic dysfunction, hepatomegaly, splenic rupture as well as spleen dysfunction, nephropathy, sicca syndrome, renal dysfunction, renal amyloidosis, and systemic amyloidosis. In this comprehensive review, we have attempted to provide in-depth insights into the aggregating behavior of lysozyme across a spectrum of variables, including concentrations, temperatures, pH levels, and mutations. Our objective is to elucidate the underlying mechanisms that govern lysozyme's aggregation process and to unravel the complex interplay between its structural attributes. Moreover, this work has critically examined the latest advancements in the field, focusing specifically on novel strategies and systems, that have been implemented to delay or inhibit the lysozyme amyloidogenesis. Apart from this, we have tried to explore and advance our fundamental understanding of the complex processes involved in lysozyme aggregation. This will help the research community to lay a robust foundation for screening, designing, and formulating targeted anti-amyloid therapeutics offering improved treatment modalities and interventions not only for lysozyme-linked amyloidopathy but for a wide range of amyloid-related disorders.
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Affiliation(s)
- Sindhujit Roy
- Biomolecular Self-Assembly Lab, Department of Biotechnology, School of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603203, India
| | - Venkat Ramanan Srinivasan
- Biomolecular Self-Assembly Lab, Department of Biotechnology, School of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603203, India
| | - Subash Arunagiri
- Biomolecular Self-Assembly Lab, Department of Biotechnology, School of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603203, India
| | - Nishant Mishra
- Biomolecular Self-Assembly Lab, Department of Biotechnology, School of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603203, India
| | - Anubhuti Bhatia
- Biomolecular Self-Assembly Lab, Department of Biotechnology, School of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603203, India
| | - Kiran P Shejale
- Dept. of Chemical Engineering, Pohang University of Science and Technology (POSTECH), Pohang, Gyeongbuk 37673, South Korea
| | - Kailash Prasad Prajapati
- Biophysical and Biomaterials Research Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| | - Karunakar Kar
- Biophysical and Biomaterials Research Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India..
| | - Bibin Gnanadhason Anand
- Biomolecular Self-Assembly Lab, Department of Biotechnology, School of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu 603203, India..
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Banerjee S. Methylglyoxal-induced modification of myoglobin: An insight into glycation mediated protein aggregation. VITAMINS AND HORMONES 2024; 125:31-46. [PMID: 38997168 DOI: 10.1016/bs.vh.2024.06.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/14/2024]
Abstract
Post-translational modification of proteins by Maillard reaction, known as glycation, is thought to be the root cause of different complications, particularly in diabetes mellitus and age-related disorders. Methylglyoxal (MG), a reactive α-oxoaldehyde, increases in diabetic condition and reacts with the proteins to form advanced glycation end products (AGEs) following a Maillard-like reaction. In a time-dependent reaction study of MG with the heme protein myoglobin (Mb), MG was found to induce significant structural alterations of the heme protein, such as heme loss, changes in tryptophan fluorescence, and decrease of α-helicity with increased β-sheet content. These changes were found to occur gradually with increasing period of incubation. Incubation of Mb with MG induced the formation of several AGE adducts, including, carboxyethyllysine at Lys-16, carboxymethyllysine at Lys-87, carboxyethyllysine or pyrraline-carboxymethyllysine at Lys-133, carboxyethyllysine at Lys-42 and hydroimidazolone or argpyrimidine at Arg-31 and Arg-139. MG induced amyloid-like aggregation of Mb was detected at a longer period of incubation. MG-derived AGEs, therefore, appear to have an important role as the precursors of protein aggregation, which, in turn, may be associated with pathophysiological complications.
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Modification with N-benzylisatin restricts stress-induced aggregation of hen egg white lysozyme: Anti-amyloidogenic property of isatin derivative with possible clinical implications. Int J Biol Macromol 2021; 187:341-349. [PMID: 34310996 DOI: 10.1016/j.ijbiomac.2021.07.092] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Revised: 06/29/2021] [Accepted: 07/14/2021] [Indexed: 11/21/2022]
Abstract
Hen egg white lysozyme (HEWL) is a structural homolog of human lysozyme and is widely used as a model protein to investigate protein aggregation. The effect of N-benzylisatin on stress-induced aggregation of HEWL has been investigated in the present study. Interaction of the isatin derivative with HEWL induced changes in protein secondary and tertiary structural conformation as evident from different biophysical and spectroscopic studies. In addition, modification with N-benzylisatin was found to increase the conformational stability of HEWL and afford considerable resistance to the protein to stress-induced aggregation as indicated from subsequent experimental studies, including thioflavin T fluorescence, microscopic imaging and dynamic light scattering analysis. Protein modification was analysed and confirmed by MALDI-TOF and ESI-MS studies. The results highlight possible clinical implications of isatin derivative in the treatment of protein misfolding and conformational disorders.
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Banerjee S. Long-term incubation of myoglobin with glyoxal induces amyloid like aggregation of the heme protein: Implications of advanced glycation end products in protein conformational disorders. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2020.115256] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Bhat WF, Ahmed A, Abbass S, Afsar M, Bano B, Masood A. Deciphering the Nature of Caffeic Acid to Inhibit the HSA Aggregation Induced by Glyoxal. Protein Pept Lett 2020; 27:725-735. [PMID: 32003651 DOI: 10.2174/0929866527666200129105141] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2019] [Revised: 11/11/2019] [Accepted: 11/13/2019] [Indexed: 11/22/2022]
Abstract
BACKGROUND Under certain circumstances, the path for protein folding deviates and attains an alternative path forming misfolded states, which are the key precursors for protein aggregation. Protein aggregation is associated with variety of diseases and leads to the cytotoxicity. These protein aggregate related diseases have been untreated so far. However, extensive attempts have been applied to develop anti-aggregating agents as possible approaches to overcome protein aggregation. Different types of substances have been reported to halt or decrease the formation of ordered protein aggregates both in vitro and in vivo, such as polyphenols and metal ions. OBJECTIVE In the present study the in vitro aggregation of human serum albumin (HSA) by using a reactive dicarbonyl glyoxal has been investigated, simultaneously an attempt has been done to inhibit the glyoxal (GO) induced aggregation of (HSA) by caffeic acid (CA). METHODS Different methods have been employed to investigate the process, fluorescence spectroscopy, circular dichroism, cango red binding assay, thioflavin T dye binding, turbidimetric analysis, docking study and transmission electron microscopy. RESULTS Results have shown that elevated concentration of GO forms aggregates of HSA, and the activity of CA suggested the possibility of inhibiting the HSA aggregation at higher concentrations, and this compound was found to have an anti-aggregation property. CONCLUSION The present study explained that micro molar concentrations of CA inhibits the aggregation of HSA and showed pronounced anti-aggregation effect at increasing concentrations in the presence of GO which is elevated in diabetic and hyperglycaemia conditions.
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Affiliation(s)
- Waseem Feeroze Bhat
- Department of Biochemistry, University of Kashmir, Hazratbal Srinagar - 190006, India
| | - Azaj Ahmed
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, UP 202002, India
| | - Shabeena Abbass
- Department of Biochemistry, University of Kashmir, Hazratbal Srinagar - 190006, India
| | - Mohammad Afsar
- CSIR, Central Drug Research Institute, Lucknow 226031, India
| | - Bilqees Bano
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, UP 202002, India
| | - Akbar Masood
- Department of Biochemistry, University of Kashmir, Hazratbal Srinagar - 190006, India
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Banerjee S. Methylglyoxal modification reduces the sensitivity of hen egg white lysozyme to stress-induced aggregation: Insight into the anti-amyloidogenic property of α-dicarbonyl compound. J Biomol Struct Dyn 2019; 38:5474-5487. [PMID: 31814530 DOI: 10.1080/07391102.2019.1702589] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
The reactive α-oxoaldehyde, methylglyoxal reacts with different proteins to form Advanced Glycation End Products (AGEs) through Maillard reaction. Its level increases significantly in diabetic condition. Here, we have investigated the effect of different concentrations of methylglyoxal (200-400 µM) on the monomeric protein, hen egg white lysozyme (HEWL) following incubation for 3 weeks. Reaction of methylglyoxal with HEWL induced considerable changes in tertiary structure of the protein, but no significant alteration in secondary structure, as evident from different spectroscopic and biophysical studies. Interestingly, methylglyoxal modification was found to enhance the thermal stability of the protein and reduce its sensitivity to stress-induced aggregation. Finally, peptide mass fingerprinting revealed modification of arginine (Arg-45, Arg-14, Arg-68 or Arg-72) and lysine (Lys-116) residues of the protein to AGE adducts, namely, hydroimidazolone, tetrahydropyrimidine, and carboxyethyllysine. Methylglyoxal-derived AGE adducts (MAGE) appear to be responsible for the observed changes in protein. As demonstrated in the present study, the findings may highlight a possible therapeutic potential of the α-oxoaldehyde against protein misfolding and conformational disorder.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Sauradipta Banerjee
- School of Chemical Sciences, Indian Association for the Cultivation of Sciences, Kolkata, India
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10
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Es-haghi A, Jahedi Moghaddam M, Shahpasand K. Role of Pre-molten Globule Structure in Protein Amyloid Fibril Formation. AVICENNA JOURNAL OF MEDICAL BIOCHEMISTRY 2019. [DOI: 10.34172/ajmb.2019.07] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
The conversion of a protein from its native conformation to the pathogenic form is a critical event in the pathogenesis of several neurodegenerative disorders such as Alzheimer’s (AD), Parkinson’s, and Huntington’s diseases, along with type II diabetic mellitus. Although there are several reports on the mechanism of protein aggregation, the actual conformation playing a part in the pathogenicity is yet unclear. Accordingly, the present study summarizes the early pathogenic conformation resulting in several protein aggregations. It is well-documented that a pre-molten globule (MG) structure appears at the early stages of some proteins. Pre-MG is one of the intermediate structures, which is formed during some protein unfolding processes. In addition, it is shown that the pre-molten structure is more flexible than the mature MG one and thus, protein easily rearranges to form amyloid fibrils in this conformation. Therefore, protein aggregation is halted by preventing the pre-MG structure. The strategy of protein aggregation prevention has profound implications in fighting the devastating disorder.
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Affiliation(s)
- Ali Es-haghi
- Department of Biology, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | | | - Koorosh Shahpasand
- Department of Brain and Cognitive Sciences, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, Academic Centre of Education, Culture and Research, Tehran, Iran
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Jansens KJA, Lambrecht MA, Rombouts I, Monge Morera M, Brijs K, Rousseau F, Schymkowitz J, Delcour JA. Conditions Governing Food Protein Amyloid Fibril Formation-Part I: Egg and Cereal Proteins. Compr Rev Food Sci Food Saf 2019; 18:1256-1276. [PMID: 33336994 DOI: 10.1111/1541-4337.12462] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2019] [Revised: 04/26/2019] [Accepted: 05/13/2019] [Indexed: 12/18/2022]
Abstract
Conditions including heating mode, time, temperature, pH, moisture and protein concentration, shear, and the presence of alcohols, chaotropic/reducing agents, enzymes, and/or salt influence amyloid fibril (AF) formation as they can affect the accessibility of amino acid sequences prone to aggregate. As some conditions applied on model protein resemble conditions in food processing unit operations, we here hypothesize that food processing can lead to formation of protein AFs with a compact cross β-sheet structure. This paper reviews conditions and food constituents that affect amyloid fibrillation of egg and cereal proteins. While egg and cereal proteins often coexist in food products, their impact on each other's fibrillation remains unknown. Hen egg ovalbumin and lysozyme form AFs when subjected to moderate heating at acidic pH separately. AFs can also be formed at higher pH, especially in the presence of alcohols or chaotropic/reducing agents. Tryptic wheat gluten digests can form fibrillar structures at neutral pH and maize and rice proteins do so in aqueous ethanol or at acidic pH, respectively.
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Affiliation(s)
- Koen J A Jansens
- KU Leuven, Laboratory of Food Chemistry and Biochemistry and Leuven Food Science and Nutrition Research Centre (LFoRCe), Kasteelpark Arenberg 20, B-3001, Leuven, Belgium.,Nutrex NV, Achterstenhoek 5, B-2275, Lille, Belgium
| | - Marlies A Lambrecht
- KU Leuven, Laboratory of Food Chemistry and Biochemistry and Leuven Food Science and Nutrition Research Centre (LFoRCe), Kasteelpark Arenberg 20, B-3001, Leuven, Belgium
| | - Ine Rombouts
- KU Leuven, Laboratory of Food Chemistry and Biochemistry and Leuven Food Science and Nutrition Research Centre (LFoRCe), Kasteelpark Arenberg 20, B-3001, Leuven, Belgium.,KU Leuven, ECOVO, Kasteelpark Arenberg 21, B-3001, Leuven, Belgium
| | - Margarita Monge Morera
- KU Leuven, Laboratory of Food Chemistry and Biochemistry and Leuven Food Science and Nutrition Research Centre (LFoRCe), Kasteelpark Arenberg 20, B-3001, Leuven, Belgium
| | - Kristof Brijs
- KU Leuven, Laboratory of Food Chemistry and Biochemistry and Leuven Food Science and Nutrition Research Centre (LFoRCe), Kasteelpark Arenberg 20, B-3001, Leuven, Belgium
| | - Frederic Rousseau
- Switch Laboratory, VIB, and Dept. of Cellular and Molecular Medicine, KU Leuven, B-3000, Leuven, Belgium
| | - Joost Schymkowitz
- Switch Laboratory, VIB, and Dept. of Cellular and Molecular Medicine, KU Leuven, B-3000, Leuven, Belgium
| | - Jan A Delcour
- KU Leuven, Laboratory of Food Chemistry and Biochemistry and Leuven Food Science and Nutrition Research Centre (LFoRCe), Kasteelpark Arenberg 20, B-3001, Leuven, Belgium
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Liao SM, Liang G, Zhu J, Lu B, Peng LX, Wang QY, Wei YT, Zhou GP, Huang RB. Influence of Calcium Ions on the Thermal Characteristics of α-amylase from Thermophilic Anoxybacillus sp. GXS-BL. Protein Pept Lett 2019; 26:148-157. [PMID: 30652633 PMCID: PMC6416487 DOI: 10.2174/0929866526666190116162958] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Revised: 01/07/2019] [Accepted: 01/08/2019] [Indexed: 11/22/2022]
Abstract
BACKGROUND α-Amylases are starch-degrading enzymes and used widely, the study on thermostability of α-amylase is a central requirement for its application in life science and biotechnology. OBJECTIVE In this article, our motivation is to study how the effect of Ca2+ ions on the structure and thermal characterization of α-amylase (AGXA) from thermophilic Anoxybacillus sp.GXS-BL. METHODS α-Amylase activity was assayed with soluble starch as the substrate, and the amount of sugar released was determined by DNS method. For AGXA with calcium ions and without calcium ions, optimum temperature (Topt), half-inactivation temperature (T50) and thermal inactivation (halflife, t1/2) was evaluated. The thermal denaturation of the enzymes was determined by DSC and CD methods. 3D structure of AGXA was homology modeled with α-amylase (5A2A) as the template. RESULTS With calcium ions, the values of Topt, T50, t1/2, Tm and ΔH in AGXA were significantly higher than those of AGXA without calcium ions, showing calcium ions had stabilizing effects on α-amylase structure with the increased temperature. Based on DSC measurements AGXA underwent thermal denaturation by adopting two-state irreversible unfolding processes. Based on the CD spectra, AGXA without calcium ions exhibited two transition states upon unfolding, including α- helical contents increasing, and the transition from α-helices to β-sheet structures, which was obviously different in AGXA with Ca2+ ions, and up to 4 Ca2+ ions were located on the inter-domain or intra-domain regions according to the modeling structure. CONCLUSION These results reveal that Ca2+ ions have pronounced influences on the thermostability of AGXA structure.
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Affiliation(s)
| | | | | | | | | | | | | | - Guo-Ping Zhou
- Address correspondence to these authors at the Department of Bioengineering, College of Life Science and Technology, Guangxi University, Nanning, 530004, China; E-mail: , Gordon Life Science Institute, 53 South Cottage Road Belmont, MA, 02478, USA; Tel/Fax: +1-9199875774/ +1-9195215550; E-mail:
| | - Ri-Bo Huang
- Address correspondence to these authors at the Department of Bioengineering, College of Life Science and Technology, Guangxi University, Nanning, 530004, China; E-mail: , Gordon Life Science Institute, 53 South Cottage Road Belmont, MA, 02478, USA; Tel/Fax: +1-9199875774/ +1-9195215550; E-mail:
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Glycation induced conformational alterations in caprine brain cystatin (CBC) leads to aggregation via passage through a partially folded state. Int J Biol Macromol 2018; 106:917-929. [DOI: 10.1016/j.ijbiomac.2017.08.086] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2017] [Revised: 08/13/2017] [Accepted: 08/14/2017] [Indexed: 11/23/2022]
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Wang S, Zheng D, Yin L, Wang F. Preparation, activity and structure of cross-linked enzyme aggregates (CLEAs) with nanoparticle. Enzyme Microb Technol 2017; 107:22-31. [DOI: 10.1016/j.enzmictec.2017.07.008] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2017] [Revised: 06/05/2017] [Accepted: 07/17/2017] [Indexed: 11/26/2022]
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Sohail A, Bhat WF, Bhat SA, Furkan M, Shah A, Bano B. Investigating the preventive effects of baicalin and gallocatechin against glyoxal-induced cystatin aggregation. J Biomol Struct Dyn 2017; 36:3791-3802. [PMID: 29143574 DOI: 10.1080/07391102.2017.1400470] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Several mammalian proteins form pathological deposits under nonphysiological conditions that are associated with many degenerative diseases. Protein aggregation is associated with aging, as well as a variety of diseases, including cystic fibrosis, amyotrophic lateral sclerosis (ALS), and hypertrophic cardiomyopathy. There is a lack of any potential anti-amyloidogenic agents and therapeutics till date. Polyphenols have been accredited with myriad biological effects. An analysis of the effects of natural agents like baicalin (BC) and gallocatechin (GC) on aggregation process can open new avenues for the treatment of protein misfolding diseases. Thus, investigation of the effects of these flavonoids on Buffalo Heart Cystatin (BHC) aggregation induced by a reactive metabolic dialdehyde, glyoxal (GO), was taken up. Results have shown that elevated concentration of GO forms aggregates of BHC, which was characterized by an increase in the ANS fluorescence intensity, an increase in ThT fluorescence intensity, red shift in Congo red absorbance, negative ellipticity peak at 217 nm in the far-UVCD and BHC aggregates displaying by TEM. Using fluorescence spectroscopic analysis with Thioflavin T, CD and electron microscopic studies, anti-aggregation effects of polyphenols, BC and GC were analyzed. The study showed that BC and GC produced concentration-dependent anti-aggregation effects with GC producing a more pronounced effect than BC. The study proposed a mechanistic approach assuming structural constraints and specific aromatic interactions of polyphenols with sheets of BHC aggregates.
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Affiliation(s)
- Aamir Sohail
- a Department of Biochemistry, Faculty of Life Sciences , Aligarh Muslim University , Aligarh , UP 202002 , India
| | - Waseem Feeroze Bhat
- a Department of Biochemistry, Faculty of Life Sciences , Aligarh Muslim University , Aligarh , UP 202002 , India
| | - Sheraz Ahmad Bhat
- a Department of Biochemistry, Faculty of Life Sciences , Aligarh Muslim University , Aligarh , UP 202002 , India
| | - Mohammad Furkan
- a Department of Biochemistry, Faculty of Life Sciences , Aligarh Muslim University , Aligarh , UP 202002 , India
| | - Aaliya Shah
- b Department of Biochemistry , SKIMS Medical College , Srinagar , Jammu and Kashmir , India
| | - Bilqees Bano
- a Department of Biochemistry, Faculty of Life Sciences , Aligarh Muslim University , Aligarh , UP 202002 , India
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Furkan M, Rizvi A, Alam MT, Zaman M, Khan RH, Naeem A. Serotonin abrogates dopamine induced aggregation of cytochrome c. Int J Biol Macromol 2017; 102:893-900. [DOI: 10.1016/j.ijbiomac.2017.04.026] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2016] [Revised: 03/14/2017] [Accepted: 04/06/2017] [Indexed: 12/15/2022]
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17
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Bhat WF, Bhat SA, Bhat IA, Sohail A, Shah A, Bano B. Anti-fibrillogenic and fibril destabilizing effects of metal ions on cystatin fibrils. Process Biochem 2017. [DOI: 10.1016/j.procbio.2017.03.021] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Furkan M, Alam MT, Rizvi A, Khan K, Ali A, Naeem A. Aloe emodin, an anthroquinone from Aloe vera acts as an anti aggregatory agent to the thermally aggregated hemoglobin. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2017; 179:188-193. [PMID: 28242448 DOI: 10.1016/j.saa.2017.02.014] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2016] [Revised: 02/04/2017] [Accepted: 02/05/2017] [Indexed: 06/06/2023]
Abstract
Aggregation of proteins is a physiological process which contributes to the pathophysiology of several maladies including diabetes mellitus, Huntington's and Alzheimer's disease. In this study we have reported that aloe emodin (AE), an anthroquinone, which is one of the active components of the Aloe vera plant, acts as an inhibitor of hemoglobin (Hb) aggregation. Hb was thermally aggregated at 60°C for four days as evident by increased thioflavin T and ANS fluorescence, shifted congo red absorbance, appearance of β sheet structure, increase in turbidity and presence of oligomeric aggregates. Increasing concentration of AE partially reverses the aggregation of the model heme protein (hemoglobin). The maximum effect of AE was observed at 100μM followed by saturation at 125μM. The results were confirmed by UV-visible spectrometry, intrinsic fluorescence, ThT, ANS, congo red assay as well as transmission electron microscopy (TEM). These results were also supported by fourier transform infrared spectroscopy (FTIR) and circular dichroism (CD) which shows the disappearance of β sheet structure and appearance of α helices. This study will serve as baseline for translatory research and the development of AE based therapeutics for diseases attributed to protein aggregation.
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Affiliation(s)
- Mohammad Furkan
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh 202002, India
| | - Md Tauqir Alam
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh 202002, India
| | - Asim Rizvi
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh 202002, India
| | - Kashan Khan
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh 202002, India
| | - Abad Ali
- Department of Chemistry, Faculty of Science, Aligarh Muslim University, Aligarh 202002, India
| | - Aabgeena Naeem
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh 202002, India.
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19
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Zhou R, Liu H, Hou G, Ju L, Liu C. Multi-spectral and thermodynamic analysis of the interaction mechanism between Cu 2+ and α-amylase and impact on sludge hydrolysis. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2017; 24:9428-9436. [PMID: 28233215 DOI: 10.1007/s11356-017-8570-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2016] [Accepted: 02/03/2017] [Indexed: 06/06/2023]
Abstract
An increasing amount of heavy metals (e.g., Cu2+) is being discharged into sewage treatment plants and is accumulating in sludge, which is toxic to the enzyme in sludge or soil when the sludge is used as fertilizer, resulting in unfavorable effect on the biological treatment of sludge and the circulation and conversion of materials in soil. In this research, effect of Cu2+ on sludge hydrolysis by α-amylase is studied from the respect of concentration and components of soluble organic matter in sludge, using three-dimensional fluorescence spectra. Results show that Cu2+ exposure not only inhibits the hydrolysis of sludge due to the denaturation of α-amylase but also affects the components of soluble organic matter in sludge. In order to illuminate the interaction mechanism between Cu2+ and α-amylase (a model of hydrolase in sludge), multi-spectra and isothermal titration microcalorimetry techniques are applied. Results show that the secondary structure of α-amylase is changed as that the α-helical content increases and the structure loosens. The microenvironment of amino acid residue in α-amylase is changed that the hydrophobicity decreases and the polarity increases with Cu2+ exposure. Isothermal titration calorimetry results show that Van der Waals force and hydrogen bond exist in the interaction between Cu2+ and α-amylase. Results from this research would favor the development of advanced process for the biological treatment of sludge containing heavy metals.
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Affiliation(s)
- Ruiqi Zhou
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan, Shandong Province, 250100, China
| | - Hong Liu
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan, Shandong Province, 250100, China
| | - Guangying Hou
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan, Shandong Province, 250100, China
| | - Lei Ju
- School of Computer Science and Technology, Shandong University, Jinan, Shandong Province, 250101, China
| | - Chunguang Liu
- Shandong Provincial Key Laboratory of Water Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Shandong University, Jinan, Shandong Province, 250100, China.
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20
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Formation of Pentosidine Cross-Linking in Myoglobin by Glyoxal: Detection of Fluorescent Advanced Glycation End Product. J Fluoresc 2017; 27:1213-1219. [PMID: 28299531 DOI: 10.1007/s10895-017-2064-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2016] [Accepted: 03/02/2017] [Indexed: 01/01/2023]
Abstract
Glyoxal, a reactive α-oxoaldehyde, increases in diabetic condition and reacts with proteins to form advanced glycation end products (AGEs) following Maillard-like reaction. Considering the significance of protein modification by glyoxal-derived AGEs, we investigated the in vitro effect of glyoxal (200 μM) on the monomeric heme protein myoglobin (Mb) (100 μM) after incubation for one week at 25 °C. Glyoxal-treated Mb exhibited increased absorbance around the Soret region, decreased α-helicity and thermal stability compared to control Mb. Intrinsic fluorescence spectrum of the treated Mb showed an additional signal in the 400-500 nm region on excitation at 280 nm that was absent in control Mb. When excited at 335 nm, the glyoxal-treated sample gave a strong fluorescence indicating AGE formation. Mass spectrometric studies revealed formation of glyoxal-derived fluorescent AGE adduct pentosidine between Lys-145 and Arg-139 residues of Mb. Other than pentosidine, additional AGE adducts, namely, carboxymethyllysine at Lys-133, hydroimidazolone at Arg-31 and pyrrolidone-carboxymethyllysine at Lys-145 were also detected. Lys-145 was thus found to contain two different types of AGE adducts, indicating the heterogeneous nature of in vitro glycation reaction. AGE-induced protein modifications might be associated with complications in disease conditions.
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21
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Furkan M, Rizvi A, Alam MT, Naeem A. Peroxidase improves the activity of catalase by preventing aggregation during TFE-induced denaturation. J Biomol Struct Dyn 2017; 36:551-560. [DOI: 10.1080/07391102.2017.1287007] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Mohammad Furkan
- Faculty of Life Sciences, Department of Biochemistry, Aligarh Muslim University, Aligarh 202002, India
| | - Asim Rizvi
- Faculty of Life Sciences, Department of Biochemistry, Aligarh Muslim University, Aligarh 202002, India
| | - Md Tauqir Alam
- Faculty of Life Sciences, Department of Biochemistry, Aligarh Muslim University, Aligarh 202002, India
| | - Aabgeena Naeem
- Faculty of Life Sciences, Department of Biochemistry, Aligarh Muslim University, Aligarh 202002, India
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22
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Methylglyoxal modification enhances the stability of hemoglobin and lowers its iron-mediated oxidation reactions: An in vitro study. Int J Biol Macromol 2017; 95:1159-1168. [DOI: 10.1016/j.ijbiomac.2016.11.006] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2016] [Revised: 11/01/2016] [Accepted: 11/02/2016] [Indexed: 01/03/2023]
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23
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Abstract
Protein interactions with surfactants are dependent on their physiochemical properties.
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Affiliation(s)
- Taruna Sharma
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Neeraj Dohare
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Meena Kumari
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Upendra Kumar Singh
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Abbul Bashar Khan
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Mahendra S. Borse
- Department of Chemistry
- Uttamrao Patil College Dahivel Taluka-sakri
- Dhule
- India
| | - Rajan Patel
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
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24
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Sharma T, Dohare N, Kumari M, Singh UK, Khan AB, Borse MS, Patel R. Comparative effect of cationic gemini surfactant and its monomeric counterpart on the conformational stability and activity of lysozyme. RSC Adv 2017. [DOI: 10.1039/c7ra00172j%0a 10.1016/j.colsurfa.2011.12.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
Protein interactions with surfactants are dependent on their physiochemical properties.
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Affiliation(s)
- Taruna Sharma
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Neeraj Dohare
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Meena Kumari
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Upendra Kumar Singh
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Abbul Bashar Khan
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Mahendra S. Borse
- Department of Chemistry
- Uttamrao Patil College Dahivel Taluka-sakri
- Dhule
- India
| | - Rajan Patel
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
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25
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Sharma T, Dohare N, Kumari M, Singh UK, Khan AB, Borse MS, Patel R. Comparative effect of cationic gemini surfactant and its monomeric counterpart on the conformational stability and activity of lysozyme. RSC Adv 2017. [DOI: 10.1039/c7ra00172j%0a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023] Open
Abstract
Protein interactions with surfactants are dependent on their physiochemical properties.
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Affiliation(s)
- Taruna Sharma
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Neeraj Dohare
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Meena Kumari
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Upendra Kumar Singh
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Abbul Bashar Khan
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Mahendra S. Borse
- Department of Chemistry
- Uttamrao Patil College Dahivel Taluka-sakri
- Dhule
- India
| | - Rajan Patel
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
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26
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Sharma T, Dohare N, Kumari M, Singh UK, Khan AB, Borse MS, Patel R. Comparative effect of cationic gemini surfactant and its monomeric counterpart on the conformational stability and activity of lysozyme. RSC Adv 2017. [DOI: 10.1039/c7ra00172j] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
Protein interactions with surfactants are dependent on their physiochemical properties.
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Affiliation(s)
- Taruna Sharma
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Neeraj Dohare
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Meena Kumari
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Upendra Kumar Singh
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Abbul Bashar Khan
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Mahendra S. Borse
- Department of Chemistry
- Uttamrao Patil College Dahivel Taluka-sakri
- Dhule
- India
| | - Rajan Patel
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
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27
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Sharma T, Dohare N, Kumari M, Singh UK, Khan AB, Borse MS, Patel R. Comparative effect of cationic gemini surfactant and its monomeric counterpart on the conformational stability and activity of lysozyme. RSC Adv 2017. [DOI: 10.1039/c7ra00172j 10.1016/j.colsurfa.2011.12.014] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Protein interactions with surfactants are dependent on their physiochemical properties.
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Affiliation(s)
- Taruna Sharma
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Neeraj Dohare
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Meena Kumari
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Upendra Kumar Singh
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Abbul Bashar Khan
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
| | - Mahendra S. Borse
- Department of Chemistry
- Uttamrao Patil College Dahivel Taluka-sakri
- Dhule
- India
| | - Rajan Patel
- Biophysical Chemistry Laboratory
- Centre for Interdisciplinary Research in Basic Sciences
- Jamia Millia Islamia (A Central University)
- New Delhi
- India
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28
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Banerjee S, Chakraborti AS. Glyoxal administration induces formation of high molecular weight aggregates of hemoglobin exhibiting amyloidal nature in experimental rats: An in vivo study. Int J Biol Macromol 2016; 93:805-813. [DOI: 10.1016/j.ijbiomac.2016.09.061] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2016] [Accepted: 09/16/2016] [Indexed: 12/24/2022]
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29
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In vitro disintegration of goat brain cystatin fibrils using conventional and gemini surfactants: Putative therapeutic intervention in amyloidoses. Int J Biol Macromol 2016; 93:493-500. [DOI: 10.1016/j.ijbiomac.2016.08.082] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2016] [Revised: 08/26/2016] [Accepted: 08/29/2016] [Indexed: 01/01/2023]
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30
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Furkan M, Fazili NA, Afsar M, Naeem A. Analysing Cytochrome c Aggregation and Fibrillation upon Interaction with Acetonitrile: an in Vitro Study. J Fluoresc 2016; 26:1959-1966. [PMID: 27550168 DOI: 10.1007/s10895-016-1889-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2016] [Accepted: 07/19/2016] [Indexed: 01/27/2023]
Abstract
The propensity of native state to form aggregated and fibrillar assemblies is a hallmark of amyloidosis. Our study was focused at analyzing the aggregation and fibrillation tendency of cytochrome c in presence of an organic solvent i.e. acetonitrile. In vitro analysis revealed that the interaction of cytochrome c with acetonitrile facilitated the oligomerization of cytochrome c via the passage through an intermediate state which was obtained at 20 % v/v concentration of acetonitrile featured by a sharp hike in the ANS fluorescence intensity with a blue shift of 20 nm compared to the native state. Oligomers and fibrils were formed at 40 and 50 % v/v concentration respectively as indicated by a significant hike in the ThT fluorescence intensity, red shift of 55 nm in congo red binding assay and an increase in absorbance at 350 nm. They possess β-sheet structure as evident from appearance of peak at 217 nm. Finally, authenticity of oligomeric and fibrillar species was confirmed by TEM imaging which revealed bead like aggregates and a meshwork of thread like fibrils respectively. It could be suggested that the fibrillation of bovine cytchrome c could serve as a model protein to unravel the general aggregation and fibrillation pattern of heme proteins. Graphical abstract ᅟ.
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Affiliation(s)
- Mohammad Furkan
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, UP, 202 002, India
| | - Naveed Ahmad Fazili
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, UP, 202 002, India
| | - Mohammad Afsar
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, UP, 202 002, India
| | - Aabgeena Naeem
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, UP, 202 002, India.
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31
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Fazili NA, Naeem A. Exploring the Transition of Human α-Synuclein from Native to the Fibrillar State: Insights into the Pathogenesis of Parkinson's Disease. J Fluoresc 2016; 26:1659-69. [PMID: 27365127 DOI: 10.1007/s10895-016-1856-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Accepted: 06/14/2016] [Indexed: 12/11/2022]
Abstract
The etiology of Parkinson's disease involves the interplay between the environmental and genetic factors. Here in this study human α-synuclein upon exposure to 100 μM pendimethalin for 12 h in vitro passes through a partially folded state which proceeds to the aggregated state and terminally ends in the fibrillar phase. Variations in the ANS fluorescence intensities led to the detection of intermediate and aggregated states at 6 and 10 h respectively. Far-UV CD analysis depicted significant α-helical content for intermediate state at 6 h in presence of 100 μM pendimethalin. Further increasing the incubation time to 12 h resulted in a predominant β-sheet content which was confirmed to be fibrillar by TEM. Turbidity, Rayleigh scattering analysis, Congo red assay and ThT measurements supported the TEM data i.e. the formation of fibrillar structure of human α-synuclein upon 12 h incubation. Thus, our observation could suggest a possible underlying molecular basis for Parkinson's disease. Graphical Abstract Schematic elucidation of the factors involved in the fibrillation of α-Synuclein during Parkinson's pathogenesis.
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Affiliation(s)
- Naveed Ahmad Fazili
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, 202 002, India
| | - Aabgeena Naeem
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, 202 002, India.
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32
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Fazili NA, Bhat IA, Bhat WF, Naeem A. Anti-fibrillation propensity of a flavonoid baicalein against the fibrils of hen egg white lysozyme: potential therapeutics for lysozyme amyloidosis. J Biomol Struct Dyn 2016; 34:2102-14. [DOI: 10.1080/07391102.2015.1108232] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Naveed Ahmad Fazili
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, , India
| | - Imtiyaz Ahmad Bhat
- Department of Chemistry, Faculty of Sciences, Aligarh Muslim University, Aligarh, , India
| | - Waseem Feeroze Bhat
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, , India
| | - Aabgeena Naeem
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, , India
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Banerjee S, Maity S, Chakraborti AS. Methylglyoxal-induced modification causes aggregation of myoglobin. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2016; 155:1-10. [PMID: 26554310 DOI: 10.1016/j.saa.2015.10.022] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2015] [Revised: 09/10/2015] [Accepted: 10/22/2015] [Indexed: 06/05/2023]
Abstract
Post-translational modification of proteins by Maillard reaction, known as glycation, is thought to be the root cause of different complications, particularly in diabetes mellitus and age-related disorders. Methylglyoxal (MG), a reactive α-oxoaldehyde, increases in diabetic condition and reacts with proteins to form advanced glycation end products (AGEs) following Maillard-like reaction. We have investigated the in vitro effect of MG (200μM) on the monomeric heme protein myoglobin (Mb) (100μM) in a time-dependent manner (7 to 18days incubation at 25°C). MG induces significant structural alterations of the heme protein, including heme loss, changes in tryptophan fluorescence, decrease of α-helicity with increased β-sheet content etc. These changes occur gradually with increased period of incubation. Incubation of Mb with MG for 7days results in formation of the AGE adducts: carboxyethyllysine at Lys-16, carboxymethyllysine at Lys-87 and carboxyethyllysine or pyrraline-carboxymethyllysine at Lys-133. On increasing the period of incubation up to 14days, additional AGEs namely, carboxyethyllysine at Lys-42 and hydroimidazolone or argpyrimidine at Arg-31 and Arg-139 have been detected. MG also induces aggregation of Mb, which is clearly evident with longer period of incubation (18days), and appears to have amyloid nature. MG-derived AGEs may thus have an important role as the precursors of protein aggregation, which, in turn, may be associated with physiological complications.
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Affiliation(s)
- Sauradipta Banerjee
- Department of Biophysics, Molecular Biology & Bioinformatics, University of Calcutta, 92, Acharyya Prafulla Chandra Road, Kolkata 700009, India
| | - Subhajit Maity
- Department of Biophysics, Molecular Biology & Bioinformatics, University of Calcutta, 92, Acharyya Prafulla Chandra Road, Kolkata 700009, India
| | - Abhay Sankar Chakraborti
- Department of Biophysics, Molecular Biology & Bioinformatics, University of Calcutta, 92, Acharyya Prafulla Chandra Road, Kolkata 700009, India.
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34
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Khan MS, Tabrez S, Rabbani N, Shah A. Oxidative Stress Mediated Cytotoxicity of Glycated Albumin: Comparative Analysis of Glycation by Glucose Metabolites. J Fluoresc 2015; 25:1721-6. [DOI: 10.1007/s10895-015-1658-2] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2015] [Accepted: 09/14/2015] [Indexed: 01/18/2023]
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35
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Anesthetic 2,2,2-trifluoroethanol induces amyloidogenesis and cytotoxicity in human serum albumin. Int J Biol Macromol 2015; 79:726-35. [PMID: 26038104 DOI: 10.1016/j.ijbiomac.2015.05.045] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2014] [Revised: 05/25/2015] [Accepted: 05/26/2015] [Indexed: 11/21/2022]
Abstract
Trifluoroethanol (TFE) mimics the membrane environments as it simulates the hydrophobic environment and better stabilizes the secondary structures in peptides owing to its hydrophobicity and hydrogen bond-forming properties. Its dielectric constant approximates that of the interior of proteins and is one-third of that of water. Human serum albumin (HSA) is a biological transporter. The effect of TFE on HSA gives the clue about the conformational changes taking place in HSA on transport of ligands across the biological membranes. At 25% (v/v) and 60% (v/v) TFE, HSA exhibits non-native β-sheet, altered tryptophan fluorescence, exposed hydrophobic clusters, increased thioflavin T fluorescence and prominent red shifted Congo red absorbance, and large hydrodynamic radii suggesting the aggregate formation. Isothermal titration calorimetric results indicate weak binding of TFE and HSA. This suggests that solvent-mediated effects dominate the interaction of TFE and HSA. TEM confirmed prefibrillar at 25% (v/v) and fibrillar aggregates at 60% (v/v) TFE. Comet assay of prefibrillar aggregates showed DNA damage causing cell necrosis hence confirming cytotoxic nature. On increasing concentration of TFE to 80% (v/v), HSA showed retention of native-like secondary structure, increased Trp and ANS fluorescence, a transition from β-sheet to α-helix. Thus, TFE at high concentration possess anti- aggregating potency.
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Employing in vitro analysis to test the potency of methylglyoxal in inducing the formation of amyloid-like aggregates of caprine brain cystatin. Amino Acids 2014; 47:135-46. [DOI: 10.1007/s00726-014-1848-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2014] [Accepted: 09/29/2014] [Indexed: 10/24/2022]
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Bhat SA, Bano B. Conformational behaviour and aggregation of chickpea cystatin in trifluoroethanol: effects of epicatechin and tannic acid. Arch Biochem Biophys 2014; 562:51-61. [PMID: 25173679 DOI: 10.1016/j.abb.2014.08.015] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2014] [Revised: 08/12/2014] [Accepted: 08/20/2014] [Indexed: 11/29/2022]
Abstract
Conformational alterations and aggregates of chickpea cystatin (CPC) were investigated upon sequential addition of trifluoroethanol (TFE) over a range of 0-70% v/v. CPC on 30% and 40% v/v TFE addition exhibited non-native β-sheet, altered intrinsic fluorescence, increased thioflavin T fluorescence, prominent red shifted shoulder peak in Congo red absorbance, and enhanced turbidity as well as Rayleigh scattering, suggesting the aggregate formation. TEM results confirmed the formation of fibrillar aggregates at 30% and 40% v/v TFE. On increasing concentration of TFE to 70% v/v, CPC showed retention of native-like secondary structure, increased intrinsic and ANS fluorescence. Thus our results show that favourable condition for fibrillation of CPC is in the range of 30-40% TFE. Moreover, anti-aggregational effects of polyphenols, epicatechin (EC) and tannic acid (TA) were analysed using ThT binding assay and other biophysical assays. EC and TA produced a concentration dependent decline in ThT fluorescence suggesting inhibition of the fibril formation. Furthermore, TA in comparison to EC, served as a more effective inhibitor against amyloid fibril formation of CPC. This work supports the universality of the amyloid-like aggregation not restricted to some special categories of protein and the fact that this aggregation can be prevented.
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Affiliation(s)
- Sheraz Ahmad Bhat
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh 202002, India
| | - Bilqees Bano
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh 202002, India.
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