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Pan S, Guo X, Li R, Hu H, Yuan J, Liu B, Hei S, Zhang Y. Activation of peroxymonosulfate via a novel UV/hydrated Fe(III) oxide coupling strategy for norfloxacin removal: Performance and mechanism. Sep Purif Technol 2022. [DOI: 10.1016/j.seppur.2022.121909] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
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2
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Zablotsky DY, Mezulis A, Blums E, Maiorov MM. Optothermal grid activation of microflow with magnetic nanoparticle thermophoresis for microfluidics. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2022; 380:20200310. [PMID: 34974722 DOI: 10.1098/rsta.2020.0310] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Accepted: 03/24/2021] [Indexed: 06/14/2023]
Abstract
We report focused light-induced activation of intense magnetic microconvection mediated by suspended magnetic nanoparticles in microscale two-dimensional optothermal grids. Fully anisotropic control of microflow and mass transport fluxes is achieved by engaging the magnetic field along one or the other preferred directions. The effect is based on the recently described thermal diffusion-magnetomechanical coupling in synthetic magnetic nanofluids. We expect that the new phenomenon can be applied as an efficient all-optical mixing strategy in integrated microfluidic devices. This article is part of the theme issue 'Transport phenomena in complex systems (part 2)'.
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Affiliation(s)
- D Y Zablotsky
- University of Latvia, Jelgavas 3, Riga 1004, Latvia
- Synthermion LLC, Deglava 126, Riga 1082, Latvia
| | - A Mezulis
- Institute of Solid State Physics, Kengaraga str. 8, Riga 1063, Latvia
| | - E Blums
- University of Latvia, Jelgavas 3, Riga 1004, Latvia
| | - M M Maiorov
- University of Latvia, Jelgavas 3, Riga 1004, Latvia
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3
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Mochalova EN, Kotov IA, Lifanov DA, Chakraborti S, Nikitin MP. Imaging flow cytometry data analysis using convolutional neural network for quantitative investigation of phagocytosis. Biotechnol Bioeng 2021; 119:626-635. [PMID: 34750809 DOI: 10.1002/bit.27986] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Revised: 10/07/2021] [Accepted: 10/28/2021] [Indexed: 01/03/2023]
Abstract
Macrophages play an important role in the adaptive immune system. Their ability to neutralize cellular targets through Fc receptor-mediated phagocytosis has relied upon immunotherapy that has become of particular interest for the treatment of cancer and autoimmune diseases. A detailed investigation of phagocytosis is the key to the improvement of the therapeutic efficiency of existing medications and the creation of new ones. A promising method for studying the process is imaging flow cytometry (IFC) that acquires thousands of cell images per second in up to 12 optical channels and allows multiparametric fluorescent and morphological analysis of samples in the flow. However, conventional IFC data analysis approaches are based on a highly subjective manual choice of masks and other processing parameters that can lead to the loss of valuable information embedded in the original image. Here, we show the application of a Faster region-based convolutional neural network (CNN) for accurate quantitative analysis of phagocytosis using imaging flow cytometry data. Phagocytosis of erythrocytes by peritoneal macrophages was chosen as a model system. CNN performed automatic high-throughput processing of datasets and demonstrated impressive results in the identification and classification of macrophages and erythrocytes, despite the variety of shapes, sizes, intensities, and textures of cells in images. The developed procedure allows determining the number of phagocytosed cells, disregarding cases with a low probability of correct classification. We believe that CNN-based approaches will enable powerful in-depth investigation of a wide range of biological processes and will reveal the intricate nature of heterogeneous objects in images, leading to completely new capabilities in diagnostics and therapy.
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Affiliation(s)
- Elizaveta N Mochalova
- Nanobiotechnology Laboratory, Moscow Institute of Physics and Technology, Moscow, Russia.,Biophotonics Laboratory, Prokhorov General Physics Institute of the Russian Academy of Sciences, Moscow, Russia.,Nanobiomedicine Division, Sirius University of Science and Technology, Sochi, Russia
| | - Ivan A Kotov
- Nanobiotechnology Laboratory, Moscow Institute of Physics and Technology, Moscow, Russia
| | - Dmitry A Lifanov
- Nanobiotechnology Laboratory, Moscow Institute of Physics and Technology, Moscow, Russia
| | | | - Maxim P Nikitin
- Nanobiotechnology Laboratory, Moscow Institute of Physics and Technology, Moscow, Russia.,Nanobiomedicine Division, Sirius University of Science and Technology, Sochi, Russia
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4
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Lunin AV, Lizunova AA, Mochalova EN, Yakovtseva MN, Cherkasov VR, Nikitin MP, Kolychev EL. Hematite Nanoparticles from Unexpected Reaction of Ferrihydrite with Concentrated Acids for Biomedical Applications. Molecules 2020; 25:E1984. [PMID: 32340382 PMCID: PMC7221743 DOI: 10.3390/molecules25081984] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2020] [Revised: 04/17/2020] [Accepted: 04/20/2020] [Indexed: 02/02/2023] Open
Abstract
The development of synthetic ways to fabricate nanosized materials with a well-defined shape, narrow-sized distribution, and high stability is of great importance to a rapidly developing area of nanotechnology. Here, we report an unusual reaction between amorphous two-line ferrihydrite and concentrated sulfuric or other mineral and organic acids. Instead of the expected dissolution, we observed the formation of new narrow-distributed brick-red nanoparticles (NPs) of hematite. Different acids produce similar nanoparticles according to scanning (SEM) and transmission electron microscopy (TEM), selected area electron diffraction (SAED), X-ray diffraction (XRD), infrared spectroscopy (FTIR), and energy-dispersive X-ray spectroscopy (EDX). The reaction demonstrates new possibilities for the synthesis of acid-resistant iron oxide nanoparticles and shows a novel pathway for the reaction of iron hydroxide with concentrated acids. The biomedical potential of the fabricated nanoparticles is demonstrated by the functionalization of the particles with polymers, fluorescent labels, and antibodies. Three different applications are demonstrated: i) specific targeting of the red blood cells, e.g., for red blood cell (RBC)-hitchhiking; ii) cancer cell targeting in vitro; iii) infrared ex vivo bioimaging. This novel synthesis route may be useful for the development of iron oxide materials for such specificity-demanding applications such as nanosensors, imaging, and therapy.
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Affiliation(s)
- Afanasy V. Lunin
- Moscow Institute of Physics and Technology, 9 Institutskiy per., Dolgoprudny, 141700 Moscow Region, Russia; (A.V.L.); (A.A.L.); (E.N.M.); (M.N.Y.); (V.R.C.); (M.P.N.)
| | - Anna A. Lizunova
- Moscow Institute of Physics and Technology, 9 Institutskiy per., Dolgoprudny, 141700 Moscow Region, Russia; (A.V.L.); (A.A.L.); (E.N.M.); (M.N.Y.); (V.R.C.); (M.P.N.)
| | - Elizaveta N. Mochalova
- Moscow Institute of Physics and Technology, 9 Institutskiy per., Dolgoprudny, 141700 Moscow Region, Russia; (A.V.L.); (A.A.L.); (E.N.M.); (M.N.Y.); (V.R.C.); (M.P.N.)
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilova St., 119991 Moscow, Russia
| | - Maria N. Yakovtseva
- Moscow Institute of Physics and Technology, 9 Institutskiy per., Dolgoprudny, 141700 Moscow Region, Russia; (A.V.L.); (A.A.L.); (E.N.M.); (M.N.Y.); (V.R.C.); (M.P.N.)
| | - Vladimir R. Cherkasov
- Moscow Institute of Physics and Technology, 9 Institutskiy per., Dolgoprudny, 141700 Moscow Region, Russia; (A.V.L.); (A.A.L.); (E.N.M.); (M.N.Y.); (V.R.C.); (M.P.N.)
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilova St., 119991 Moscow, Russia
| | - Maxim P. Nikitin
- Moscow Institute of Physics and Technology, 9 Institutskiy per., Dolgoprudny, 141700 Moscow Region, Russia; (A.V.L.); (A.A.L.); (E.N.M.); (M.N.Y.); (V.R.C.); (M.P.N.)
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilova St., 119991 Moscow, Russia
- Shemyakin–Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya St., 16/10, 117997 Moscow, Russia
| | - Eugene L. Kolychev
- Moscow Institute of Physics and Technology, 9 Institutskiy per., Dolgoprudny, 141700 Moscow Region, Russia; (A.V.L.); (A.A.L.); (E.N.M.); (M.N.Y.); (V.R.C.); (M.P.N.)
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilova St., 119991 Moscow, Russia
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5
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Cherkasov VR, Mochalova EN, Babenyshev AV, Vasilyeva AV, Nikitin PI, Nikitin MP. Nanoparticle Beacons: Supersensitive Smart Materials with On/Off-Switchable Affinity to Biomedical Targets. ACS NANO 2020; 14:1792-1803. [PMID: 31944662 DOI: 10.1021/acsnano.9b07569] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Smart materials that can switch between different states under the influence of chemical triggers are highly demanded in biomedicine, where specific responsiveness to biomarkers is imperative for precise diagnostics and therapy. Superior selectivity of drug delivery to malignant cells may be achieved with the nanoagents that stay "inert" until "activation" by the characteristic profile of microenvironment cues (e.g., tumor metabolites, angiogenesis factors, microRNA/DNA, etc.). However, despite a wide variety and functional complexity of smart material designs, their real-life applications are hindered by very limited sensitivity to inputs. Here, we present ultrasensitive smart nanoagents with input-dependent On/Off switchable affinity to a biomedical target based on a combination of gold nanoparticles with low-energy polymer structures. In the proposed method, a nanoparticle-based agent is surface coated with a custom designed flexible polymer chain, which has an input-switchable structure that regulates accessibility of the terminal receptor for target binding. Implementation of the concept with a DNA-model of such polymer has yielded nanoagents that have input-dependent cell-targeting capabilities and responsiveness to as little as 30 fM of DNA input in 15 min lateral flow assay. Thus, we show that surface phenomena can augment nanoagents with capability for switchable affinity without compromising the sensitivity to inputs. The proposed approach is promising for development of next-generation theranostic agents and ultrasensitive nanosensors for point-of-care diagnostics.
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Affiliation(s)
- Vladimir R Cherkasov
- Moscow Institute of Physics and Technology , 9 Institutskii per. , 141700 Dolgoprudny, Moscow Region , Russia
- Prokhorov General Physics Institute of the Russian Academy of Sciences , 38 Vavilov St , 119991 Moscow , Russia
| | - Elizaveta N Mochalova
- Moscow Institute of Physics and Technology , 9 Institutskii per. , 141700 Dolgoprudny, Moscow Region , Russia
- Prokhorov General Physics Institute of the Russian Academy of Sciences , 38 Vavilov St , 119991 Moscow , Russia
| | - Andrey V Babenyshev
- Moscow Institute of Physics and Technology , 9 Institutskii per. , 141700 Dolgoprudny, Moscow Region , Russia
- Prokhorov General Physics Institute of the Russian Academy of Sciences , 38 Vavilov St , 119991 Moscow , Russia
| | - Alexandra V Vasilyeva
- Moscow Institute of Physics and Technology , 9 Institutskii per. , 141700 Dolgoprudny, Moscow Region , Russia
| | - Petr I Nikitin
- Prokhorov General Physics Institute of the Russian Academy of Sciences , 38 Vavilov St , 119991 Moscow , Russia
| | - Maxim P Nikitin
- Moscow Institute of Physics and Technology , 9 Institutskii per. , 141700 Dolgoprudny, Moscow Region , Russia
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6
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Antibody-directed metal-organic framework nanoparticles for targeted drug delivery. Acta Biomater 2020; 103:223-236. [PMID: 31843718 DOI: 10.1016/j.actbio.2019.12.012] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2019] [Revised: 11/15/2019] [Accepted: 12/10/2019] [Indexed: 11/22/2022]
Abstract
Nanosized metal-organic frameworks (nMOFs) have shown great promise as high-capacity carriers for a variety of applications. For biomedicine, numerous nMOFs have been proposed that can transport virtually any molecular drug, can finely tune their payload release profile, etc. However, perspectives of their applications for the targeted drug delivery remain relatively unclear. So far, only a few works have reported specific cell targeting by nMOFs exclusively through small ligands such as folic acid or RGD peptides. Here we show feasibility of targeted drug delivery to specific cancer cells in vitro with nMOFs functionalized with such universal tool as an antibody. We demonstrate ca. 120 nm magnetic core/MOFs shell nanoagents loaded with doxorubicin/daunorubicin and coupled with an antibody though a hydrophilic carbohydrate interface. We show that carboxymethyl-dextran coating of nMOFs allows extensive loading of the drug molecules (up to 15.7 mg/g), offers their sustained release in physiological media and preserves antibody specificity. Reliable performance of the agents is illustrated with trastuzumab-guided selective targeting and killing of HER2/neu-positive breast cancer cells in vitro. The approach expands the scope of nMOF applications and can serve as a platform for the development of potent theranostic nanoagents. STATEMENT OF SIGNIFICANCE: The unique combination of exceptional drug capacity and controlled release, biodegradability and low toxicity makes nanosized metal-organic frameworks (nMOFs) nearly ideal drug vehicles for various biomedical applications. Unfortunately, the prospective of nMOF applications for the targeted drug delivery is still unclear since only a few examples have been reported for nMOF cell targeting, exclusively for small ligands. In this work, we fill the important gap and demonstrate nanoagent that can specifically kill target cancer cells via drug delivery based on recognition of HER2/neu cell surface receptors by such universal and specific tool as antibodies. The proposed approach is universal and can be adapted for specific biomedical tasks using antibodies of any specificity and nMOFs of a various composition.
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7
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Lunin AV, Sokolov IL, Zelepukin IV, Zubarev IV, Yakovtseva MN, Mochalova EN, Rozenberg JM, Nikitin MP, Kolychev EL. Spindle-like MRI-active europium-doped iron oxide nanoparticles with shape-induced cytotoxicity from simple and facile ferrihydrite crystallization procedure. RSC Adv 2020; 10:7301-7312. [PMID: 35493903 PMCID: PMC9049874 DOI: 10.1039/c9ra10683a] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Accepted: 02/04/2020] [Indexed: 12/18/2022] Open
Abstract
Novel MRI active spindle-like nanoparticles prepared by a facile procedure display cytotoxicity due to synergistic combination of shape and europium content.
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Affiliation(s)
- Afanasy V. Lunin
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
| | - Ilya L. Sokolov
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
| | - Ivan V. Zelepukin
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
- Shemyakin–Ovchinnikov Institute of Bioorganic Chemistry
- Russian Academy of Sciences
| | - Ilya V. Zubarev
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
| | - Maria N. Yakovtseva
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
| | - Elizaveta N. Mochalova
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
- Prokhorov General Physics Institute of the Russian Academy of Sciences
- Moscow 119991
| | - Julian M. Rozenberg
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
| | - Maxim P. Nikitin
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
| | - Eugene L. Kolychev
- Moscow Institute of Physics and Technology (National Research University)
- Moscow
- Russia
- Prokhorov General Physics Institute of the Russian Academy of Sciences
- Moscow 119991
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8
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Mochalova EN, Kotov IA, Rozenberg JM, Nikitin MP. Precise Quantitative Analysis of Cell Targeting by Particle-Based Agents Using Imaging Flow Cytometry and Convolutional Neural Network. Cytometry A 2019; 97:279-287. [PMID: 31809002 DOI: 10.1002/cyto.a.23939] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2019] [Revised: 10/13/2019] [Accepted: 11/06/2019] [Indexed: 01/10/2023]
Abstract
Understanding the intricacies of particle-cell interactions is essential for many applications such as imaging, phototherapy, and drug/gene delivery, because it is the key to accurate control of the particle properties for the improvement of their therapeutic and diagnostic efficiency. Recently, high-throughput methods have emerged for the detailed investigation of these interactions. For example, imaging flow cytometry (IFC) collects up to 60,000 images of cells per second (in 12 optical channels) and provides information about morphology and organelle localization in combination with fluorescence and side scatter intensity data. However, analysis of IFC data is extremely difficult to perform using conventional methods that calculate integral parameters or use mask-based object recognition. Here, we show application of a convolutional neural network (CNN) for precise quantitative analysis of particle targeting of cells using IFC data. CNN provides high-throughput object detection with almost human precision but avoids the subjective choice of image processing parameters that often leads to incorrect data interpretation. The method allows accurate counting of cell-bound particles with reliable discrimination from the nonbound particles in the field of view. The proposed method expands capabilities of spot counting applications (such as organelle counting, quantification of cell-cell and cell-bacteria interactions) and is going to be useful not only for high-throughput analysis of IFC data but also for other imaging techniques. © 2019 International Society for Advancement of Cytometry.
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Affiliation(s)
- Elizaveta N Mochalova
- Moscow Institute of Physics and Technology, 1A Kerchenskaya St., 117303, Moscow, Russia.,Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991, Moscow, Russia
| | - Ivan A Kotov
- Moscow Institute of Physics and Technology, 1A Kerchenskaya St., 117303, Moscow, Russia
| | - Julian M Rozenberg
- Moscow Institute of Physics and Technology, 1A Kerchenskaya St., 117303, Moscow, Russia
| | - Maxim P Nikitin
- Moscow Institute of Physics and Technology, 1A Kerchenskaya St., 117303, Moscow, Russia
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