Screening of hazardous groundwater pollutants responsible for microbial ecological consequences by integrated nontargeted analysis and high-throughput sequencing technologies

Genome-wide identification and expression patterns of uridine diphosphate (UDP)-glycosyltransferase genes in the brown planthopper, Nilaparvata lugens

Uridine diphosphate-glycosyltransferases (UGTs) are responsible for glycosylation by combining various small lipophilic molecules with sugars to produce water-soluble glycosides, which are crucial for the metabolism of plant secondary metabolites and detoxification in insects. This study presents a genome-wide analysis of the UGT gene family in the brown planthopper, Nilaparvata lugens, a destructive insect pest of rice in Asia. Based on the similarity to UGT homologs from other organisms, 20 putative NlUGT genes were identified in N. lugens. Sequence analysis revealed an average amino acid identity of 45.64 %; however, catalytic and sugar-binding residues, along with UGT signature motifs, were highly conserved. Phylogenetic analysis showed that the 20 NlUGTs were clustered into three main groups. The motif numbers ranged from 5 to 10, with motifs 1 and 4 being found in the functional domains of all 20 NlUGT proteins. Tandem and segmental duplication analysis identified one tandem duplication pair (UGT386K7 and UGT386K8) and two pairs of collinearity genes (UGT362C6/UGT386J4 and UGT386C2/UGT386G5) that expanded through segmental duplication within the UGT gene family of N. lugens. Combining the transcriptome and real-time quantitative PCR data showed that gut, antennae, integument, and ovaries were the tissues enriched with NlUGT gene expression. Six NlUGTs were present mainly in the gut, suggesting their putative roles in detoxification. This research provides valuable information on the molecular and genetic basis of NlUGTs, establishing a solid foundation for subsequent functional investigations of UGTs in planthopper, as well as paving the way for identifying potential targets to manage N. lugens effectively.

Season and side-chain length affect the occurrences and behaviors of phthalic acid esters in wastewater treatment plants

Emerging pollutants (EPs) are prevalent in aquatic environments globally. Researchers strive to understand their occurrence and behavior prior to their release into the environment. In this study, we examined five wastewater treatment plants (WWTPs), collected 50 wastewater samples and 10 sludge samples. We explored the sources and destinations of phthalic acid esters (PAEs) within these WWTPs using mass balance equations. Wastewater treatment diminished the frequency and concentration of PAEs, and decreased the fraction of short-chain PAEs. We confirmed the increased concentration of PAEs post-primary treatment and modified the mass balance equation. Calculations suggest that weaker "the mix" in winter than in summer and stronger sedimentation in winter than in summer resulted in high efficiency of PAEs removal by winter wastewater treatment. The mass flux of biodegradation was influenced by the combination of biodegradation efficiency and the strength of the particular type of PAEs collected, with no seasonal differences. Mass fluxes for sludge sedimentation were mainly influenced by season and were higher in winter than in summer. This study enhances our understanding of emerging pollutants in manual treatment facilities and offers insights for optimizing wastewater treatment methods for water professionals.

Reproducibility in nontarget screening (NTS) of environmental emerging contaminants: Assessing different HLB SPE cartridges and instruments

Non-targeted screening (NTS) methods are integral in environmental research for detecting emerging contaminants. However, their efficacy can be influenced by variations in hydrophilic-lipophilic balance (HLB) solid phase extraction (SPE) cartridges and high-resolution mass spectrometry (HRMS) instruments across different laboratories. In this study, we scrutinized the influence of five HLB SPE cartridges (Nano, Weiqi, CNW, Waters, and J&K) and four LC-HRMS platforms (Agilent, Waters, Thermo, and AB SCIEX) on the identification of emerging environmental contaminants. Our results demonstrate that 87.6 % of the target compounds and over 59.6 % of the non-target features were consistently detected across all tested HLB cartridges, with an overall 71.2 % universally identified across the four LC-HRMS systems. Discrepancies in detection rates were primarily attributable to variations in retention time stability, mass stability of precursors and fragments, system cleanliness affecting fold change and p-values, and fragment response. These findings confirm the necessity of refining parameter criteria for NTS. Moreover, our study confirms the efficacy of the PyHRMS tool in analyzing and processing data from multiple instrumental platforms, reinforcing its utility for multi-platform NTS. Overall, our findings underscore the reliability and robustness of NTS methods in identifying potential water contaminants, while also highlighting factors that may influence these outcomes.

Nitrogen removal from pharmaceutical wastewater using simultaneous nitrification-denitrification coupled with sulfur denitrification in full-scale system

Fermentation pharmaceutical wastewater (FPW) containing excessive ammonium and low chemical oxygen demand (COD)/nitrogen ratio (C/N ratio) brings serious environmental risks. The stepwise nitrogen removal was achieved in a full-scale anaerobic/aerobic/anoxic treatment system with well-constructed consortia, that enables simultaneous partial nitrification-denitrification coupled with sulfur autotrophic denitrification (SPND-SAD) (∼99 % (NH4+-N) and ∼98 % (TN) removals) at the rate of 0.8-1.2 kg-N/m3/d. Inoculating simultaneous nitrification-denitrification (SND) consortia in O1 tank decreased the consumed ΔCOD and ΔCOD/ΔTN of A1 + O1 tank, resulting in the occurrence of short-cut SND at low C/N ratio. In SAD process (A2 tank), bio-generated polysulfides reacted with HS- to rearrange into shorter polysulfides, enhancing sulfur bioavailability and promoting synergistic SAD removal. PICRUSt2 functional prediction indicated that bioaugmentation increased genes related to Nitrogen/Sulfur/Carbohydrate/Xenobiotics metabolism. Key functional gene analysis highlighted the enrichment of nirS and soxB critical for SPND-SAD system. This work provides new insights into the application of bioaugmentation for FPW treatment.

Environmental stressors altered the groundwater microbiome and nitrogen cycling: A focus on influencing mechanisms and pathways

Nitrogen cycling, as an important biogeochemical process in groundwater, strongly impacts the energy and matter flow of groundwater ecology. Phthalate esters (PAEs) were screened as key environmental stressors in the groundwater of Beijing, contributing to the alteration of microbial community structure and functions; thus, it could be deduced that these stressors might influence nitrogen cycling that is almost exclusively mediated by microorganisms. Identification of the influences of PAEs on groundwater nitrogen cycling and exploration of the potential influence mechanisms and pathways are vital but still challenging. This study explored the influence mechanisms and pathways of the environmental stressor PAE on nitrogen cycling in groundwater collected from a typical monitoring station in Beijing based on high-throughput sequencing and bioinformatics analysis combined with mediation analysis methods. The results suggested that among the 5 detected PAEs, dimethyl phthalate and diethyl phthalate significantly negatively impacted nitrogen cycling processes, especially nitrogen fixation and denitrification processes (p < 0.05), in groundwater. Their influences were fully or partially mediated by functional microorganisms, particularly assigned keystone genera (such as Dechloromonas, Aeromonas and Noviherbaspirillum), whose abundance was significantly inhibited by these PAEs via dysregulation of carbohydrate metabolism and activation of defense mechanisms. These findings confirmed that the influences of environmental stressors PAEs on nitrogen cycling in groundwater might be mediated by the "PAE stress-groundwater microbiome-nitrogen cycling alteration" pathway. This study may advance the understanding of the consequences of environmental stressors on groundwater ecology and support the ecological hazard assessment of groundwater stressors.

Leachate leakage enhances the microbial diversity and richness but decreases Proteobacteria and weakens stable microbial ecosystem in landfill groundwater

Sanitary landfill is the most prevalent and economic method for municipal solid waste disposal, and the resultant groundwater pollution has become an environmental problem due to leachate leakage. The pollution characteristics in groundwater near landfill sites have been extensively investigated, although the succession characteristics and driving mechanisms of microbial communities in leachate-contaminated groundwater and the sensitive microbial indicators for leachate leakage identification remain poorly studied. Herein, results showed that leachate leakage enhanced the microbial diversity and richness and transferred endemic bacteria from landfills into groundwater, producing an average decrease of 17.73% in the relative abundance of Proteobacteria. The key environmental factor driving the evolution of microbial communities in groundwater due to leachate pollution was organic matter, which can explain 16.13% of the changes in microbial community composition. The |βNTI| values of the bacterial communities in all six landfills were <2, and the assembly process of microbial communities was primarily dominated using stochastic processes. Leachate pollution changed the assembly mechanism, transforming the community assembly process from an undominated process to a dispersal limitation process. Leachate pollution reduced the efficiency and stability of microbial communities in groundwater, increasing the vulnerability of the stable microbial ecosystems in groundwater. Notably, microbial indicators are more sensitive to leachate leakage and could accurately identify landfills where leachate leakage occurred and other extraneous pollutants. The phylum Proteobacteria and mcrA could act as appropriate indicators for the identification of leachate leakage. These results provide a novel insight into the monitoring, identification of groundwater pollution and the scientific guidance for appropriate remediation strategies for leachate-contaminated groundwater.